Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 1.7e-193 679.5 423 100.0
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 3.9e-182 641.7 334 98.2
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 4.1e-176 621.7 333 96.4
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 2.7e-175 619.0 425 92.5
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 4.3e-173 611.7 364 90.9
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 9.0e-171 604.0 425 88.5
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 1.7e-166 589.7 426 79.8
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 6.6e-166 587.8 365 85.8
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 1.5e-165 586.6 365 85.5
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 3.3e-165 585.5 365 84.9
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 2.9e-161 572.4 363 85.1
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 2.9e-161 572.4 363 85.1
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 2.4e-160 569.3 339 87.0
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 1.1e-157 560.5 339 85.8
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 9.3e-152 540.8 362 81.5
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 3.9e-150 535.4 333 83.5
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 1.8e-147 526.6 335 82.1
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 1.1e-144 517.3 333 81.1
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 7.1e-144 514.6 333 80.2
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 3.0e-142 509.2 335 78.2
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 8.2e-140 501.1 330 78.8
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 6.9e-139 498.0 331 78.9
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 9.0e-139 497.7 331 78.5
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 1.2e-138 497.3 326 79.1
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 4.5e-138 495.4 328 78.4
Psat3g064000 Pisum sativum HOM05D004820 ORTHO05D005946 5.9e-138 495.0 331 78.9
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 5.9e-138 495.0 330 77.6
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 5.9e-138 495.0 332 78.0
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 7.6e-138 494.6 329 77.8
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 1.0e-137 494.2 333 78.4
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 1.7e-137 493.4 333 78.4
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 2.2e-137 493.0 334 78.4
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 3.8e-137 492.3 331 76.4
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 5.0e-137 491.9 331 78.2
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 5.0e-137 491.9 336 77.1
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 8.5e-137 491.1 328 78.7
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.4e-136 490.3 333 77.5
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 2.5e-136 489.6 338 74.9
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 2.5e-136 489.6 335 77.0
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 3.2e-136 489.2 330 78.5
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 4.2e-136 488.8 338 74.9
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 7.2e-136 488.0 336 76.8
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 9.4e-136 487.6 338 74.6
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 9.4e-136 487.6 333 77.2
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.2e-135 487.3 333 77.2
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 1.2e-135 487.3 337 75.7
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 1.6e-135 486.9 344 75.0
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 1.6e-135 486.9 336 77.1
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 2.7e-135 486.1 336 76.2
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 3.6e-135 485.7 329 77.5
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 3.6e-135 485.7 332 75.9
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 4.6e-135 485.3 332 75.9
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 1.0e-134 484.2 335 76.1
Sed0001544 Sechium edule HOM05D004820 ORTHO05D005946 1.8e-134 483.4 332 75.6
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 3.0e-134 482.6 336 76.2
MELO3C015826.2 Cucumis melo HOM05D004820 ORTHO05D005946 5.1e-134 481.9 336 74.7
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 1.1e-133 480.7 336 75.3
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 1.5e-133 480.3 330 76.4
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 3.3e-133 479.2 329 77.8
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 4.3e-133 478.8 341 77.7
MD03G1263300 Malus domestica HOM05D004820 ORTHO05D005946 1.7e-132 476.9 328 77.1
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 4.8e-132 475.3 329 73.6
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 8.2e-132 474.6 338 73.1
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 1.4e-131 473.8 333 75.7
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 3.1e-131 472.6 333 75.4
MD11G1284100 Malus domestica HOM05D004820 ORTHO05D005946 4.1e-131 472.2 325 76.9
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 5.3e-131 471.9 338 74.0
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 5.3e-131 471.9 333 75.1
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 9.1e-131 471.1 334 74.6
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 9.1e-131 471.1 334 74.9
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 1.2e-130 470.7 335 74.9
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 1.5e-130 470.3 328 73.2
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 5.0e-129 465.3 332 75.0
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 1.9e-128 463.4 311 75.9
Prupe.8G239700 Prunus persica HOM05D004820 ORTHO05D005946 1.6e-127 460.3 313 77.6
EL10Ac8g18597 Beta vulgaris HOM05D004820 ORTHO05D005946 1.0e-126 457.6 327 74.6
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 3.3e-125 452.6 326 72.1
RcHm_v2.0_Chr6g0290841 Rosa chinensis HOM05D004820 ORTHO05D005946 4.8e-124 448.7 334 72.8
AUR62012894 Chenopodium quinoa HOM05D004820 ORTHO05D005946 1.1e-123 447.6 336 69.0
FAN15G1635 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.8e-123 446.8 329 73.6
FAN20G0972 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.8e-123 446.8 329 73.6
AUR62027118 Chenopodium quinoa HOM05D004820 ORTHO05D005946 9.1e-123 444.5 335 69.6
FvH4_2g23380 Fragaria vesca HOM05D004820 ORTHO05D005946 9.1e-123 444.5 329 73.3
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 4.5e-122 442.2 339 68.4
HanXRQChr01g0003021 Helianthus annuus HOM05D004820 ORTHO05D005946 7.7e-122 441.4 306 75.5
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.0e-121 441.0 342 71.3
FAN27G0992 Fragaria x ananassa HOM05D004820 ORTHO05D005946 2.2e-121 439.9 338 71.6
SEGI_11361 Sequoiadendron giganteum HOM05D004820 ORTHO05D005946 2.2e-121 439.9 335 67.8
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 1.4e-120 437.2 306 75.2
FAN24G1940 Fragaria x ananassa HOM05D004820 ORTHO05D005946 5.5e-120 435.3 347 69.7
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.5e-117 427.2 285 78.6
Zm00001eb324990 Zea mays HOM05D004820 ORTHO05D005946 7.0e-115 418.3 332 68.1
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 1.2e-114 417.5 301 73.1
Lj4g0011679 Lotus japonicus HOM05D004820 ORTHO05D005946 1.6e-114 417.2 318 71.4
Mapoly0140s0012 Marchantia polymorpha HOM05D004820 ORTHO05D005946 1.6e-114 417.2 334 65.9
ECA248G2754 Erigeron canadensis HOM05D004820 ORTHO05D005946 1.5e-112 410.6 303 71.9
Pp3c21_19780 Physcomitrium patens HOM05D004820 ORTHO05D005946 1.5e-112 410.6 344 65.1
Zm00001eb426860 Zea mays HOM05D004820 ORTHO05D005946 4.2e-112 409.1 323 67.8
Zm00001eb426810 Zea mays HOM05D004820 ORTHO05D005946 5.5e-112 408.7 325 67.1
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 1.8e-110 403.7 323 66.6
Zm00001eb426820 Zea mays HOM05D004820 ORTHO05D005946 2.0e-109 400.2 323 66.9
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 2.6e-109 399.8 338 64.8
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 6.3e-108 395.2 293 73.7
Zm00001eb426850 Zea mays HOM05D004820 ORTHO05D005946 2.7e-106 389.8 302 67.9
SMO356G0463 Selaginella moellendorffii HOM05D004820 ORTHO05D005946 3.2e-104 382.9 321 64.2
PGSC0003DMG400010602 Solanum tuberosum HOM05D004820 ORTHO05D005946 5.9e-98 362.1 333 62.5
PGSC0003DMG400010600 Solanum tuberosum HOM05D004820 ORTHO05D005946 4.2e-96 355.9 321 64.2
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 8.9e-94 348.2 229 77.3
Rhsim01G0274100 Rhododendron simsii HOM05D004820 ORTHO05D005946 1.2e-93 347.8 288 66.0
Zm00001eb216840 Zea mays HOM05D004820 ORTHO05D005946 3.5e-90 336.3 314 59.6
CBR_g23335 Chara braunii HOM05D004820 ORTHO05D005946 2.8e-87 326.6 347 52.2
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 1.7e-81 307.4 361 52.1
Solyc07g052190.1 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.7e-81 307.4 272 63.2
GSVIVG01001158001 Vitis vinifera HOM05D004820 ORTHO05D005946 1.8e-70 270.8 162 85.2
Zm00001eb426870 Zea mays HOM05D004820 ORTHO05D005946 2.2e-68 263.8 170 78.2
CAN.G198.19 Capsicum annuum HOM05D004820 ORTHO05D005946 3.7e-68 263.1 242 62.0
Sopen07g025700 Solanum pennellii HOM05D004820 ORTHO05D005946 3.7e-68 263.1 239 63.6
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 1.9e-67 260.8 194 72.7
Sopen07g025830 Solanum pennellii HOM05D004820 ORTHO05D005946 2.5e-64 250.4 239 59.4
SHI31236 Sapria himalayana HOM05D004820 ORTHO05D005946 5.6e-64 249.2 199 68.8
Cpa.g.sc52.46 Carica papaya HOM05D004820 ORTHO05D005946 2.1e-58 230.7 140 85.0
Solyc07g052050.2 Solanum lycopersicum HOM05D004820 ORTHO05D005946 3.3e-56 223.4 158 72.2
SHI31234 Sapria himalayana HOM05D004820 ORTHO05D005946 1.5e-53 214.5 115 91.3
HanXRQChr15g0487721 Helianthus annuus HOM05D004820 ORTHO05D005946 1.5e-48 198.0 168 60.7
Zm00001eb426830 Zea mays HOM05D004820 ORTHO05D005946 5.3e-46 189.5 118 81.4
Sopen07g025690 Solanum pennellii HOM05D004820 ORTHO05D005946 2.4e-43 180.6 130 73.1
Lj1g0027313 Lotus japonicus HOM05D004820 ORTHO05D005946 1.1e-38 165.2 159 56.0
MCO06G052 Micromonas commoda HOM05D004820 ORTHO05D005946 1.8e-38 164.5 156 50.6
CARHR182160 Cardamine hirsuta HOM05D004820 ORTHO05D005946 1.1e-35 155.2 116 69.8
Sopen07g025610 Solanum pennellii HOM05D004820 ORTHO05D005946 1.0e-33 148.7 162 58.0
Cre13.g567750 Chlamydomonas reinhardtii HOM05D004820 ORTHO05D005946 1.8e-33 147.9 304 36.2
Os03g0701100 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 3.0e-33 147.1 182 49.5
BraA09t42170Z Brassica rapa HOM05D004820 ORTHO05D005946 2.0e-29 134.4 97 74.2
TAR365G1077 Trochodendron aralioides HOM05D004820 ORTHO05D005946 7.4e-24 115.9 97 62.9
Gohir.D05G222300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 2.9e-20 104.0 64 76.6
Zm00001eb078380 Zea mays HOM05D004820 ORTHO05D005946 2.9e-20 104.0 72 69.4
Gohir.D11G242500 Gossypium hirsutum HOM05D004820 ORTHO05D005946 8.5e-20 102.4 64 75.0
Gorai.009G229700 Gossypium raimondii HOM05D004820 ORTHO05D005946 8.5e-20 102.4 64 75.0
Nitab4.5_0003852g0050 Nicotiana tabacum HOM05D004820 ORTHO05D005946 1.4e-19 101.7 74 71.6
Gorai.011G187700 Gossypium raimondii HOM05D004820 ORTHO05D005946 4.2e-19 100.1 64 73.4
Zm00001eb180190 Zea mays HOM05D004820 ORTHO05D005946 2.7e-18 97.4 68 69.1
Zm00001eb368520 Zea mays HOM05D004820 ORTHO05D005946 6.1e-18 96.3 68 67.6
Zm00001eb017440 Zea mays HOM05D004820 ORTHO05D005946 1.4e-17 95.1 66 68.2
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 2.2e-15 87.8 46 89.1
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 2.2e-15 87.8 46 89.1
Nitab4.5_0003327g0040 Nicotiana tabacum HOM05D004820 ORTHO05D005946 3.7e-15 87.0 57 78.9
Nn4g23784 Nelumbo nucifera HOM05D004820 ORTHO05D005946 6.9e-14 82.8 108 46.3
BcaC08g43579 Brassica carinata HOM05D004820 ORTHO05D001418 1.8e-09 68.2 35 88.6
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 8.8e-09 65.9 56 58.9


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