Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT35G1474 Cannabis sativa HOM05D007300 ORTHO05D009301 0.0e+00 1306.2 676 100.0
FvH4_3g06410 Fragaria vesca HOM05D007300 ORTHO05D009301 8.8e-229 797.3 678 63.7
Prupe.4G073700 Prunus persica HOM05D007300 ORTHO05D009301 2.6e-228 795.8 682 64.2
RcHm_v2.0_Chr5g0012901 Rosa chinensis HOM05D007300 ORTHO05D009301 1.1e-226 790.4 681 63.3
FAN21G2574 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.8e-226 789.6 678 62.8
CiPaw.10G096200 Carya illinoinensis HOM05D007300 ORTHO05D009301 2.4e-226 789.3 678 63.3
MD05G1291800 Malus domestica HOM05D007300 ORTHO05D009301 5.0e-224 781.6 704 62.6
Cfa001024 Carpinus fangiana HOM05D007300 ORTHO05D009301 2.5e-223 779.2 678 64.0
QL05p060322 Quercus lobata HOM05D007300 ORTHO05D009301 1.0e-221 773.9 679 62.4
FAN11G2841 Fragaria x ananassa HOM05D007300 ORTHO05D009301 2.0e-220 769.6 739 58.6
GSVIVG01021378001 Vitis vinifera HOM05D007300 ORTHO05D009301 4.5e-209 731.9 679 60.4
Dinv32299 Davidia involucrata HOM05D007300 ORTHO05D009301 1.7e-208 729.9 666 62.3
Potri.001G353800 Populus trichocarpa HOM05D007300 ORTHO05D009301 8.6e-208 727.6 682 61.1
Haze_05485 Corylus avellana HOM05D007300 ORTHO05D009301 4.7e-206 721.8 784 55.4
TWI73G0852 Tripterygium wilfordii HOM05D007300 ORTHO05D009301 2.6e-204 716.1 687 58.1
ClCG03G007190 Citrullus lanatus HOM05D007300 ORTHO05D009301 7.8e-201 704.5 676 58.3
CSS0020184 Camellia sinensis var. sinensis HOM05D007300 ORTHO05D009301 2.1e-198 696.4 678 59.0
Thecc.06G157700 Theobroma cacao HOM05D007300 ORTHO05D009301 1.1e-197 694.1 690 57.7
TAR627G1006 Trochodendron aralioides HOM05D007300 ORTHO05D009301 1.2e-196 690.6 680 57.2
Sabra16G0232700 Salix brachista HOM05D007300 ORTHO05D009301 8.3e-195 684.5 703 57.9
Ciclev10014510m.g Citrus clementina HOM05D007300 ORTHO05D009301 1.2e-193 680.6 692 57.5
Gorai.011G040700 Gossypium raimondii HOM05D007300 ORTHO05D009301 3.9e-192 675.6 685 57.4
CsaV3_1G032780 Cucumis sativus L. HOM05D007300 ORTHO05D009301 3.3e-191 672.5 680 55.7
Gohir.D10G038600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 9.5e-191 671.0 693 56.9
Gohir.A10G037600 Gossypium hirsutum HOM05D007300 ORTHO05D009301 5.8e-188 661.8 688 57.4
Cpa.g.sc17.110 Carica papaya HOM05D007300 ORTHO05D009301 2.4e-186 656.4 615 59.5
Actinidia19486 Actinidia chinensis HOM05D007300 ORTHO05D009301 1.2e-185 654.1 677 57.0
Manes.17G064900 Manihot esculenta HOM05D007300 ORTHO05D009301 2.1e-185 653.3 674 56.1
Atru.chr10.1398 Acer truncatum HOM05D007300 ORTHO05D009301 4.6e-185 652.1 563 63.9
COL.COLO4_22798 Corchorus olitorius HOM05D007300 ORTHO05D009301 2.3e-184 649.8 685 56.5
Atru.chr10.1407 Acer truncatum HOM05D007300 ORTHO05D009301 3.9e-184 649.0 563 63.8
Glyma.08G121900 Glycine max HOM05D007300 ORTHO05D009301 1.3e-179 634.0 616 55.8
Lalb_Chr13g0295471 Lupinus albus HOM05D007300 ORTHO05D009301 2.9e-179 632.9 668 54.0
Medtr8g088030 Medicago truncatula HOM05D007300 ORTHO05D009301 3.8e-179 632.5 632 55.2
Aqoxy1G01857 Aquilegia oxysepala HOM05D007300 ORTHO05D009301 1.4e-178 630.6 689 53.3
Lj4g0024386 Lotus japonicus HOM05D007300 ORTHO05D009301 2.1e-177 626.7 635 55.1
Glyma.05G164500 Glycine max HOM05D007300 ORTHO05D009301 1.0e-176 624.4 626 55.1
Nitab4.5_0001283g0060 Nicotiana tabacum HOM05D007300 ORTHO05D009301 1.3e-176 624.0 678 54.1
arahy.Tifrunner.gnm1.ann1.D64P8M Arachis hypogaea HOM05D007300 ORTHO05D009301 3.0e-176 622.9 666 54.2
Eucgr.D00343 Eucalyptus grandis HOM05D007300 ORTHO05D009301 1.1e-175 620.9 682 52.1
Oeu021524.1 Olea europaea HOM05D007300 ORTHO05D009301 1.1e-175 620.9 610 57.7
arahy.Tifrunner.gnm1.ann1.FQ35JE Arachis hypogaea HOM05D007300 ORTHO05D009301 2.5e-175 619.8 678 53.2
Ca_17871_v3 Cicer arietinum L. HOM05D007300 ORTHO05D009301 7.3e-175 618.2 664 52.9
Thhalv10000812m.g Eutrema salsugineum HOM05D007300 ORTHO05D009301 9.6e-175 617.8 685 52.8
Peaxi162Scf00649g00027 Petunia axillaris HOM05D007300 ORTHO05D009301 9.6e-175 617.8 609 57.0
TPR.G6793 Trifolium pratense HOM05D007300 ORTHO05D009301 2.8e-174 616.3 603 54.6
Nitab4.5_0003714g0040 Nicotiana tabacum HOM05D007300 ORTHO05D009301 6.2e-174 615.1 685 53.7
Phvul.002G244500 Phaseolus vulgaris HOM05D007300 ORTHO05D009301 9.0e-173 611.3 648 52.5
Lj1C1181T32 Lonicera japonica HOM05D007300 ORTHO05D009301 1.2e-172 610.9 680 53.5
THA.LOC104827733 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.0e-172 610.1 695 52.1
HanXRQChr04g0119571 Helianthus annuus HOM05D007300 ORTHO05D009301 9.9e-172 607.8 681 51.8
Aa31LG9G6430 Aethionema arabicum HOM05D007300 ORTHO05D009301 3.8e-171 605.9 672 52.7
Duzib235G1110 Durio zibethinus HOM05D007300 ORTHO05D009301 4.9e-171 605.5 683 52.6
A06p45940 Brassica napus HOM05D007300 ORTHO05D009301 6.4e-171 605.1 689 51.7
Carub.0008s0147 Capsella rubella HOM05D007300 ORTHO05D009301 6.4e-171 605.1 683 52.0
Lsat_1_v5_gn_7_31040 Lactuca sativa HOM05D007300 ORTHO05D009301 4.2e-170 602.4 652 53.2
CAN.G257.51 Capsicum annuum HOM05D007300 ORTHO05D009301 5.4e-170 602.1 677 54.1
CARHR175340 Cardamine hirsuta HOM05D007300 ORTHO05D009301 5.4e-170 602.1 694 52.2
PGSC0003DMG400003073 Solanum tuberosum HOM05D007300 ORTHO05D009301 7.1e-170 601.7 676 54.1
BolC7t43517H Brassica oleracea HOM05D007300 ORTHO05D009301 1.6e-169 600.5 682 51.3
C07p29650 Brassica napus HOM05D007300 ORTHO05D009301 4.6e-169 599.0 682 51.2
AT5G46420 Arabidopsis thaliana HOM05D007300 ORTHO05D009301 7.9e-169 598.2 696 51.4
Sp2g11270 Schrenkiella parvula HOM05D007300 ORTHO05D009301 7.9e-169 598.2 694 52.0
Psat7g066760 Pisum sativum HOM05D007300 ORTHO05D009301 2.3e-168 596.7 700 49.0
DCAR_027959 Daucus carota HOM05D007300 ORTHO05D009301 4.3e-167 592.4 610 55.6
MBI10_g02388_MAGBIO Magnolia biondii HOM05D007300 ORTHO05D009301 4.3e-167 592.4 689 50.9
BraA06t27457Z Brassica rapa HOM05D007300 ORTHO05D009301 5.6e-167 592.0 670 51.9
Solyc02g071280.3 Solanum lycopersicum HOM05D007300 ORTHO05D009301 5.6e-167 592.0 678 53.4
VMungo0251G3397 Vigna mungo HOM05D007300 ORTHO05D009301 5.6e-167 592.0 619 54.3
ECA236G2360 Erigeron canadensis HOM05D007300 ORTHO05D009301 3.6e-166 589.3 675 50.2
PSO541G4163 Papaver somniferum HOM05D007300 ORTHO05D009301 8.1e-166 588.2 613 53.0
AL8G11990 Arabidopsis lyrata HOM05D007300 ORTHO05D009301 2.4e-165 586.6 689 51.4
Sopen02g020340 Solanum pennellii HOM05D007300 ORTHO05D009301 6.9e-165 585.1 678 52.8
Sc05g0006590 Simmondsia chinensis HOM05D007300 ORTHO05D009301 1.3e-163 580.9 685 50.1
Nn3g20905 Nelumbo nucifera HOM05D007300 ORTHO05D009301 2.7e-161 573.2 633 54.0
SalBow8G1735 Salvia bowleyana HOM05D007300 ORTHO05D009301 7.9e-161 571.6 627 53.0
Migut.M00959 Erythranthe guttata HOM05D007300 ORTHO05D009301 1.0e-160 571.2 688 50.7
AUR62027555 Chenopodium quinoa HOM05D007300 ORTHO05D009301 1.5e-159 567.4 614 51.8
FAN16G1565 Fragaria x ananassa HOM05D007300 ORTHO05D009301 1.4e-157 560.8 488 61.9
SGA_v2.0_scaffold1G00132 Striga asiatica HOM05D007300 ORTHO05D009301 2.6e-156 556.6 677 50.1
PGR044G1273 Punica granatum HOM05D007300 ORTHO05D009301 2.9e-155 553.1 563 54.7
AUR62035801 Chenopodium quinoa HOM05D007300 ORTHO05D009301 2.5e-154 550.1 615 51.1
ATR1153G036 Amborella trichopoda HOM05D007300 ORTHO05D009301 4.1e-133 479.6 625 45.4
EL10Ac8g19794 Beta vulgaris HOM05D007300 ORTHO05D009301 4.2e-130 469.5 684 43.6
HPP92_023296 Vanilla planifolia HOM05D007300 ORTHO05D009301 1.8e-128 464.2 691 42.8
Sed0024786 Sechium edule HOM05D007300 ORTHO05D009301 8.5e-123 445.3 459 56.4
PSO675G3105 Papaver somniferum HOM05D007300 ORTHO05D009301 3.5e-108 396.7 357 60.5
unitig_92.g28150 Utricularia gibba HOM05D007300 ORTHO05D009301 9.8e-103 378.6 602 41.4
SEGI_38698 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 1.6e-92 344.7 614 36.6
HPP92_023271 Vanilla planifolia HOM05D007300 ORTHO05D009301 3.3e-90 337.0 682 35.6
MELO3C002704.2 Cucumis melo HOM05D007300 ORTHO05D009301 1.5e-87 328.2 362 51.4
Mapoly0019s0078 Marchantia polymorpha HOM05D007300 ORTHO05D009301 2.9e-78 297.4 705 30.4
CDE06G2820 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 1.2e-73 282.0 326 49.4
Pp3c15_14250 Physcomitrium patens HOM05D007300 ORTHO05D009301 4.7e-73 280.0 524 33.4
Zm00001eb296050 Zea mays HOM05D007300 ORTHO05D009301 3.7e-70 270.4 373 43.2
AagrBONN_evm.TU.Sc2ySwM_228.1844 Anthoceros agrestis HOM05D007300 ORTHO05D004905 8.6e-67 259.2 578 32.4
Os05g0566300 Oryza sativa ssp. japonica HOM05D007300 ORTHO05D009301 1.6e-57 228.4 209 52.6
Gorai.004G093400 Gossypium raimondii HOM05D007300 ORTHO05D009301 1.1e-40 172.6 169 56.2
Zm00001eb349440 Zea mays HOM05D007300 ORTHO05D009301 1.4e-40 172.2 179 49.7
Gohir.D08G088700 Gossypium hirsutum HOM05D007300 ORTHO05D009301 1.2e-39 169.1 169 55.6
SEGI_17563 Sequoiadendron giganteum HOM05D007300 ORTHO05D009301 2.1e-36 158.3 208 44.7
MCO05G669 Micromonas commoda HOM05D007300 ORTHO05D009301 5.5e-29 133.7 226 35.4
Cre03.g191950 Chlamydomonas reinhardtii HOM05D007300 ORTHO05D009301 6.1e-20 103.6 214 32.7
Zm00001eb184690 Zea mays HOM05D007300 ORTHO05D009301 6.3e-17 93.6 84 47.6
CDE06G1765 Ceratophyllum demersum HOM05D007300 ORTHO05D009301 8.2e-17 93.2 157 36.3
Gohir.A12G048400 Gossypium hirsutum HOM05D003927 ORTHO05D004905 2.6e-07 61.6 226 24.3
Duzib248G0257 Durio zibethinus HOM05D003927 ORTHO05D004905 3.5e-07 61.2 181 26.5
Thecc.02G005900 Theobroma cacao HOM05D003927 ORTHO05D004905 1.7e-06 58.9 256 22.7
arahy.Tifrunner.gnm1.ann1.QMDN7F Arachis hypogaea HOM05D003927 ORTHO05D004905 2.2e-06 58.5 163 27.6
Sc24g0002980 Simmondsia chinensis HOM05D003927 ORTHO05D004905 2.2e-06 58.5 271 21.8
arahy.Tifrunner.gnm1.ann1.YAS9I4 Arachis hypogaea HOM05D003927 ORTHO05D004905 2.9e-06 58.2 163 27.6
Gohir.D12G047200 Gossypium hirsutum HOM05D003927 ORTHO05D004905 2.9e-06 58.2 202 24.8
THA.LOC104798460 Tarenaya hassleriana HOM05D007300 ORTHO05D009301 2.9e-06 58.2 123 37.4
MSTRG.7601 Avicennia marina HOM05D003927 ORTHO05D004905 5.0e-06 57.4 201 25.4
Gorai.008G049800 Gossypium raimondii HOM05D003927 ORTHO05D004905 5.0e-06 57.4 181 26.0
Cc00_g22880 Coffea canephora HOM05D003927 ORTHO05D004905 6.5e-06 57.0 184 26.6
Oeu058944.1 Olea europaea HOM05D003927 ORTHO05D004905 8.5e-06 56.6 208 23.1


User provided reference genes

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