Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 1.0e-211 740.0 419 100.0
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 8.9e-171 604.0 420 81.4
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 1.7e-169 599.7 420 83.6
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 2.2e-169 599.4 420 80.2
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 1.8e-168 596.3 420 84.0
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 1.8e-168 596.3 420 83.6
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 4.1e-168 595.1 419 80.7
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 9.2e-168 594.0 420 82.6
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 9.2e-168 594.0 428 82.2
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 1.6e-167 593.2 429 79.3
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 2.0e-167 592.8 420 82.1
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 3.5e-167 592.0 424 80.9
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 2.5e-165 585.9 420 80.5
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 5.6e-165 584.7 420 80.2
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 7.3e-165 584.3 420 80.2
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.2e-164 583.6 429 73.7
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 2.8e-164 582.4 421 82.4
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 4.7e-164 581.6 421 83.4
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 1.0e-163 580.5 417 77.7
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 1.8e-163 579.7 420 81.4
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 4.0e-163 578.6 432 79.4
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 6.8e-163 577.8 432 79.2
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 6.8e-163 577.8 420 81.4
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 1.2e-162 577.0 424 79.5
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 1.5e-162 576.6 432 78.9
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 2.0e-162 576.2 428 79.7
MD11G1284100 Malus domestica HOM05D004820 ORTHO05D005946 4.4e-162 575.1 418 81.6
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.7e-161 573.2 429 78.6
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 1.7e-161 573.2 427 77.5
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.4e-160 570.1 418 74.2
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 5.4e-160 568.2 425 72.5
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 5.4e-160 568.2 424 81.4
MELO3C015826.2 Cucumis melo HOM05D004820 ORTHO05D005946 7.0e-160 567.8 429 76.5
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 7.0e-160 567.8 422 74.4
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 2.7e-159 565.8 419 72.6
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 6.0e-159 564.7 420 78.1
Psat3g064000 Pisum sativum HOM05D004820 ORTHO05D005946 2.3e-158 562.8 420 79.8
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 2.3e-158 562.8 423 74.5
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 3.0e-158 562.4 419 77.3
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 3.0e-158 562.4 423 79.2
MD03G1263300 Malus domestica HOM05D004820 ORTHO05D005946 1.1e-157 560.5 418 79.9
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 1.1e-157 560.5 429 79.3
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 1.5e-157 560.1 424 74.8
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 4.3e-157 558.5 432 77.1
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 4.7e-156 555.1 424 75.0
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 1.1e-155 553.9 425 77.6
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 1.8e-155 553.1 424 71.2
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 2.3e-155 552.7 418 73.9
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 3.1e-155 552.4 421 77.0
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 8.9e-155 550.8 423 74.9
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 4.4e-154 548.5 418 72.5
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 2.2e-153 546.2 421 75.1
Sed0001544 Sechium edule HOM05D004820 ORTHO05D005946 2.9e-153 545.8 424 76.9
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 2.9e-153 545.8 422 72.5
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 1.2e-151 540.4 427 74.2
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 1.0e-150 537.3 419 77.1
Prupe.8G239700 Prunus persica HOM05D004820 ORTHO05D005946 5.1e-150 535.0 418 77.0
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 1.1e-149 533.9 428 75.5
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 4.3e-149 531.9 402 77.9
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 5.6e-149 531.6 415 70.8
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 1.1e-147 527.3 422 71.8
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 5.2e-147 525.0 421 68.2
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 3.4e-146 522.3 424 72.6
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 8.4e-145 517.7 333 80.2
EL10Ac8g18597 Beta vulgaris HOM05D004820 ORTHO05D005946 1.4e-144 516.9 425 67.3
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 1.4e-144 516.9 333 80.5
AUR62027118 Chenopodium quinoa HOM05D004820 ORTHO05D005946 4.6e-143 511.9 423 68.6
FvH4_2g23380 Fragaria vesca HOM05D004820 ORTHO05D005946 6.0e-143 511.5 420 74.0
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 3.9e-142 508.8 419 66.6
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 1.1e-141 507.3 420 67.6
FAN20G0972 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.1e-141 507.3 421 72.0
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 1.9e-141 506.5 398 72.9
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 4.3e-141 505.4 331 80.1
FAN15G1635 Fragaria x ananassa HOM05D004820 ORTHO05D005946 2.8e-140 502.7 420 73.8
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 3.6e-140 502.3 420 67.4
AUR62012894 Chenopodium quinoa HOM05D004820 ORTHO05D005946 3.6e-140 502.3 422 67.8
FAN24G1940 Fragaria x ananassa HOM05D004820 ORTHO05D005946 4.7e-140 501.9 438 71.2
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 6.9e-139 498.0 411 66.9
RcHm_v2.0_Chr6g0290841 Rosa chinensis HOM05D004820 ORTHO05D005946 6.9e-139 498.0 425 72.0
FAN27G0992 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.2e-138 497.3 429 72.0
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 3.4e-138 495.7 326 78.2
HanXRQChr01g0003021 Helianthus annuus HOM05D004820 ORTHO05D005946 6.4e-137 491.5 396 71.7
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 4.2e-136 488.8 326 77.9
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 2.7e-135 486.1 334 75.4
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 1.0e-134 484.2 334 75.4
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 1.3e-134 483.8 387 73.4
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 1.7e-134 483.4 334 75.1
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 6.6e-134 481.5 334 74.9
Mapoly0140s0012 Marchantia polymorpha HOM05D004820 ORTHO05D005946 1.5e-130 470.3 422 60.4
ECA248G2754 Erigeron canadensis HOM05D004820 ORTHO05D005946 2.0e-130 469.9 393 67.7
Zm00001eb324990 Zea mays HOM05D004820 ORTHO05D005946 1.7e-129 466.8 449 63.0
Zm00001eb426860 Zea mays HOM05D004820 ORTHO05D005946 3.8e-129 465.7 414 61.6
SEGI_11361 Sequoiadendron giganteum HOM05D004820 ORTHO05D005946 1.1e-128 464.2 418 62.2
Zm00001eb426810 Zea mays HOM05D004820 ORTHO05D005946 7.9e-127 458.0 417 60.9
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 1.0e-126 457.6 422 63.0
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 3.0e-126 456.1 414 60.4
Pp3c21_19780 Physcomitrium patens HOM05D004820 ORTHO05D005946 5.1e-126 455.3 424 59.4
Zm00001eb426820 Zea mays HOM05D004820 ORTHO05D005946 1.9e-125 453.4 416 61.3
Lj4g0011679 Lotus japonicus HOM05D004820 ORTHO05D005946 1.3e-124 450.7 399 63.7
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 1.5e-122 443.7 442 60.6
Zm00001eb426850 Zea mays HOM05D004820 ORTHO05D005946 9.9e-122 441.0 392 61.0
SMO356G0463 Selaginella moellendorffii HOM05D004820 ORTHO05D005946 1.0e-113 414.5 397 62.0
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 6.5e-113 411.8 376 60.4
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.3e-110 404.1 376 58.8
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 1.4e-104 384.0 454 59.5
PGSC0003DMG400010602 Solanum tuberosum HOM05D004820 ORTHO05D005946 3.2e-104 382.9 424 53.5
Zm00001eb216840 Zea mays HOM05D004820 ORTHO05D005946 6.7e-102 375.2 417 56.4
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 1.7e-100 370.5 222 83.8
Rhsim01G0274100 Rhododendron simsii HOM05D004820 ORTHO05D005946 4.8e-100 369.0 289 70.2
PGSC0003DMG400010600 Solanum tuberosum HOM05D004820 ORTHO05D005946 4.1e-99 365.9 322 64.0
CBR_g23335 Chara braunii HOM05D004820 ORTHO05D005946 7.2e-96 355.1 441 53.1
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 1.1e-91 341.3 295 64.4
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 3.6e-87 326.2 283 75.3
Solyc07g052190.1 Solanum lycopersicum HOM05D004820 ORTHO05D005946 2.6e-82 310.1 272 61.0
SHI31236 Sapria himalayana HOM05D004820 ORTHO05D005946 9.4e-80 301.6 281 61.2
Sopen07g025700 Solanum pennellii HOM05D004820 ORTHO05D005946 1.2e-74 284.6 344 49.1
CAN.G198.19 Capsicum annuum HOM05D004820 ORTHO05D005946 3.5e-74 283.1 351 49.0
Zm00001eb426870 Zea mays HOM05D004820 ORTHO05D005946 1.3e-73 281.2 171 81.9
GSVIVG01001158001 Vitis vinifera HOM05D004820 ORTHO05D005946 2.9e-73 280.0 163 87.1
Sopen07g025830 Solanum pennellii HOM05D004820 ORTHO05D005946 1.7e-65 254.2 239 56.9
Cpa.g.sc52.46 Carica papaya HOM05D004820 ORTHO05D005946 4.9e-60 236.1 137 87.6
Solyc07g052050.2 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.9e-56 224.2 165 67.9
SHI31234 Sapria himalayana HOM05D004820 ORTHO05D005946 4.7e-55 219.5 114 93.0
HanXRQChr15g0487721 Helianthus annuus HOM05D004820 ORTHO05D005946 1.6e-50 204.5 164 63.4
Zm00001eb426830 Zea mays HOM05D004820 ORTHO05D005946 2.1e-47 194.1 119 82.4
Sopen07g025690 Solanum pennellii HOM05D004820 ORTHO05D005946 4.4e-45 186.4 130 75.4
Lj1g0027313 Lotus japonicus HOM05D004820 ORTHO05D005946 5.8e-45 186.0 159 61.0
Os03g0701100 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 2.4e-43 180.6 282 47.5
Sopen07g025610 Solanum pennellii HOM05D004820 ORTHO05D005946 4.7e-39 166.4 259 42.5
MCO06G052 Micromonas commoda HOM05D004820 ORTHO05D005946 1.1e-38 165.2 156 51.9
Cre13.g567750 Chlamydomonas reinhardtii HOM05D004820 ORTHO05D005946 2.2e-36 157.5 319 36.1
BraA09t42170Z Brassica rapa HOM05D004820 ORTHO05D005946 1.2e-29 135.2 153 51.0
CARHR182160 Cardamine hirsuta HOM05D004820 ORTHO05D005946 1.1e-27 128.6 114 59.6
Gohir.D05G222300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.0e-25 122.1 64 87.5
Nitab4.5_0003852g0050 Nicotiana tabacum HOM05D004820 ORTHO05D005946 2.3e-25 120.9 165 45.5
Gohir.D11G242500 Gossypium hirsutum HOM05D004820 ORTHO05D005946 3.0e-25 120.6 64 85.9
Gorai.009G229700 Gossypium raimondii HOM05D004820 ORTHO05D005946 3.0e-25 120.6 64 85.9
Gorai.011G187700 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.5e-24 118.2 64 84.4
TAR365G1077 Trochodendron aralioides HOM05D004820 ORTHO05D005946 3.3e-24 117.1 101 61.4
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 2.8e-23 114.0 141 59.6
Zm00001eb078380 Zea mays HOM05D004820 ORTHO05D005946 3.6e-23 113.6 72 77.8
Zm00001eb180190 Zea mays HOM05D004820 ORTHO05D005946 3.1e-22 110.5 92 66.3
Zm00001eb368520 Zea mays HOM05D004820 ORTHO05D005946 4.4e-21 106.7 68 77.9
Zm00001eb017440 Zea mays HOM05D004820 ORTHO05D005946 7.6e-21 105.9 66 78.8
Nitab4.5_0003327g0040 Nicotiana tabacum HOM05D004820 ORTHO05D005946 1.9e-19 101.3 180 41.7
Nn4g23784 Nelumbo nucifera HOM05D004820 ORTHO05D005946 5.1e-17 93.2 108 50.0
Dinv32923 Davidia involucrata HOM05D004820 ORTHO05D005946 4.2e-11 73.6 49 75.5
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 3.0e-09 67.4 73 50.7
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 3.0e-09 67.4 73 50.7


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