Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.7e-113 412.9 251 100.0
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.8e-81 306.6 251 73.7
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 6.2e-79 298.1 250 72.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 4.0e-78 295.4 251 73.3
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 7.6e-77 291.2 253 69.6
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.2e-76 289.7 253 67.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.9e-76 289.3 253 69.6
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.9e-75 286.6 253 67.6
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.5e-75 286.2 253 67.6
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.2e-75 285.8 253 68.4
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.2e-75 285.4 253 66.8
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 4.2e-75 285.4 253 69.2
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 7.1e-75 284.6 253 70.4
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 9.3e-75 284.3 253 66.4
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 1.3e-73 280.4 250 68.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 3.9e-73 278.9 253 68.0
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.1e-70 270.8 254 67.7
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 3.1e-70 269.2 265 63.0
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 6.9e-70 268.1 253 66.0
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 3.4e-69 265.8 253 67.6
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 4.5e-69 265.4 261 59.4
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.5e-69 265.4 249 70.7
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 4.5e-69 265.4 249 70.7
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.3e-68 263.8 264 63.3
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.3e-68 263.8 249 70.3
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.0e-68 261.9 257 67.7
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 1.1e-67 260.8 295 59.3
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.5e-67 258.5 259 69.1
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 1.2e-66 257.3 252 65.5
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.6e-66 256.9 248 69.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.8e-65 253.4 262 61.8
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.8e-65 253.4 248 71.4
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 2.3e-65 253.1 250 64.4
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.0e-65 252.7 248 66.9
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 3.9e-65 252.3 248 65.3
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 3.9e-65 252.3 248 65.3
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 8.7e-65 251.1 248 65.7
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.1e-64 250.8 250 62.4
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 9.7e-64 247.7 258 57.0
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 9.7e-64 247.7 252 61.5
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 6.3e-63 245.0 248 69.4
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 8.2e-63 244.6 264 59.8
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.1e-62 244.2 262 64.1
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.4e-62 243.8 248 63.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 5.3e-62 241.9 250 63.2
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.9e-62 241.5 264 60.6
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 2.0e-61 240.0 262 60.7
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 2.6e-61 239.6 264 55.3
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 3.4e-61 239.2 248 56.0
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 5.9e-61 238.4 251 60.6
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.0e-60 237.7 274 61.3
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.7e-60 236.9 251 61.8
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 5.0e-60 235.3 295 49.8
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 6.5e-60 235.0 264 57.2
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 6.5e-60 235.0 254 63.0
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 1.1e-59 234.2 291 49.5
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.1e-59 234.2 264 56.1
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 1.1e-59 234.2 264 56.1
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 3.2e-59 232.6 260 59.2
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 4.2e-59 232.3 265 58.9
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 4.2e-59 232.3 264 56.1
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 7.2e-59 231.5 250 61.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 6.1e-58 228.4 265 60.8
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 5.1e-57 225.3 248 56.9
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 5.7e-56 221.9 262 59.2
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 6.3e-55 218.4 264 52.3
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 8.2e-55 218.0 250 60.4
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.1e-54 217.6 253 60.5
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 5.3e-54 215.3 264 51.9
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 6.9e-54 214.9 245 53.5
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 6.9e-54 214.9 250 61.2
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 9.1e-54 214.5 249 58.2
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.5e-53 213.8 249 63.5
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 4.5e-53 212.2 258 55.8
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.2e-52 209.9 250 57.2
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 2.9e-52 209.5 248 59.7
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.8e-52 209.1 250 55.6
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 8.5e-52 208.0 250 54.4
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.1e-50 203.4 293 52.9
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.0e-49 201.1 254 53.1
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 6.7e-49 198.4 249 52.6
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.0e-48 196.8 265 55.8
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 9.7e-48 194.5 206 65.0
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 4.8e-47 192.2 266 56.4
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 6.3e-47 191.8 251 51.8
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 8.2e-47 191.4 248 52.0
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 7.0e-46 188.3 249 51.4
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 5.9e-45 185.3 265 54.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 7.7e-45 184.9 249 51.4
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.5e-43 180.6 252 52.4
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.8e-41 173.7 259 45.2
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.1e-40 171.0 245 46.5
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.5e-40 170.6 252 48.4
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 8.5e-36 154.8 251 49.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.4e-33 147.5 298 44.0
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.0e-32 143.7 116 64.7
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.4e-32 142.9 120 64.2
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 4.8e-31 139.0 89 76.4
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 5.9e-29 132.1 288 42.0
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 8.5e-28 128.3 292 43.5
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.5e-27 126.7 204 50.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.7e-26 122.5 215 51.6
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 2.8e-23 113.2 69 78.3
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 4.9e-23 112.5 283 36.4
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 2.4e-22 110.2 69 73.9
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 4.1e-22 109.4 120 57.5
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-21 105.9 191 45.5
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-20 104.8 191 44.5
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.7e-20 104.0 334 34.4
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 4.3e-19 99.4 249 36.1
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 8.9e-17 91.7 119 50.4
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.7e-15 87.4 205 45.4
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 3.5e-13 79.7 120 48.3
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 74.3 117 50.4
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 74.3 117 50.4
MD10G1090400 Malus domestica HOM05D006779 ORTHO05D008491 1.0e-09 68.2 104 60.6
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.2e-09 65.9 50 70.0
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.2e-07 60.5 181 38.1
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 6.4e-07 58.9 94 43.6
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.1e-06 56.2 191 35.1


User provided reference genes

Program Settings