Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 2.2e-116 422.5 248 100.0
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 5.2e-102 374.8 263 83.7
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 5.7e-101 371.3 263 82.5
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 9.8e-101 370.5 263 84.4
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.7e-100 369.8 263 82.5
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.0e-98 362.8 263 84.0
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 4.7e-87 325.1 248 79.4
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 9.2e-75 284.3 264 67.4
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 7.3e-72 274.6 260 61.5
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.6e-71 273.5 263 62.4
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 4.7e-71 271.9 258 61.6
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 1.2e-69 267.3 263 62.4
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 9.9e-69 264.2 262 64.9
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.7e-68 263.5 254 65.4
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 2.9e-68 262.7 252 63.9
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 4.9e-68 261.9 250 65.2
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.3e-68 261.2 253 63.6
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.9e-67 260.0 253 63.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.9e-67 260.0 253 63.2
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.9e-67 260.0 253 63.6
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 3.2e-67 259.2 250 64.8
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 9.2e-67 257.7 250 65.6
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.6e-66 256.9 252 65.5
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.5e-66 255.8 263 61.6
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 4.6e-66 255.4 252 63.1
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 7.8e-66 254.6 298 54.7
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.3e-65 253.8 260 62.7
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 3.9e-65 252.3 253 63.6
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 5.1e-65 251.9 251 65.3
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 5.1e-65 251.9 248 68.1
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.5e-64 250.4 253 60.9
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 3.3e-64 249.2 264 62.5
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.3e-64 249.2 252 61.9
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 5.6e-64 248.4 291 54.6
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 9.5e-64 247.7 261 57.5
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 1.2e-63 247.3 251 60.2
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 4.7e-63 245.4 252 60.7
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 6.2e-63 245.0 253 65.2
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 8.1e-63 244.6 249 66.3
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 8.1e-63 244.6 251 64.5
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.8e-62 243.4 266 61.7
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.4e-62 243.0 249 65.9
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.4e-62 243.0 256 64.8
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.1e-62 242.7 252 64.7
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.5e-61 240.4 247 62.8
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.6e-61 239.6 249 65.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 2.6e-61 239.6 253 65.2
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.7e-60 236.9 256 63.3
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 2.9e-60 236.1 245 56.7
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 4.9e-60 235.3 252 58.7
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 6.4e-60 235.0 245 61.6
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 6.4e-60 235.0 245 61.6
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.4e-59 233.8 251 61.8
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.4e-59 233.8 245 61.6
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 1.4e-59 233.8 261 61.3
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 7.8e-58 228.0 257 59.5
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 8.7e-57 224.6 246 64.2
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.1e-56 224.2 247 59.5
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.9e-56 223.4 245 59.6
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 2.5e-56 223.0 255 54.1
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 3.3e-56 222.6 247 59.9
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 4.3e-56 222.2 245 60.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.1e-54 217.6 254 56.3
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 4.0e-54 215.7 247 55.5
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 9.0e-54 214.5 274 55.8
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 9.0e-54 214.5 261 57.9
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 1.5e-53 213.8 245 60.8
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 2.0e-53 213.4 249 58.2
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 3.4e-53 212.6 262 55.7
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.7e-52 210.3 258 51.2
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.9e-52 209.5 294 50.3
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 8.4e-52 208.0 249 59.8
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 1.4e-51 207.2 250 58.0
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.4e-51 207.2 249 55.4
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.2e-51 206.1 249 55.0
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 5.4e-51 205.3 249 56.6
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 1.6e-50 203.8 251 58.6
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 4.6e-50 202.2 242 53.3
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 3.9e-49 199.1 248 58.9
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 8.7e-49 198.0 250 58.0
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 5.6e-48 195.3 246 56.9
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 7.3e-48 194.9 247 53.4
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 7.3e-48 194.9 248 53.6
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 1.6e-47 193.7 250 52.8
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.1e-46 189.5 291 51.5
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 3.4e-45 186.0 264 52.7
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.4e-43 179.9 265 53.2
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 5.4e-43 178.7 251 49.4
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.6e-42 177.2 264 51.5
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 3.9e-41 172.6 260 51.2
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 8.7e-41 171.4 246 45.9
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 4.8e-39 165.6 206 57.8
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.1e-35 154.5 251 47.8
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.4e-35 154.1 238 45.8
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 7.9e-34 148.3 299 43.1
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.0e-29 133.7 154 60.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 5.8e-29 132.1 204 51.0
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.0e-28 131.3 116 58.6
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 2.9e-28 129.8 288 40.3
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 5.5e-27 125.6 286 39.5
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.7e-26 123.2 215 50.7
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 7.9e-26 121.7 86 68.6
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 1.9e-24 117.1 292 40.8
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 6.3e-23 112.1 70 77.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.1e-22 111.3 190 44.7
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 6.9e-22 108.6 334 35.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-21 107.5 190 42.6
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 1.3e-20 104.4 151 58.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 3.8e-20 102.8 70 67.1
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.7e-18 96.7 203 50.7
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 2.7e-18 96.7 151 54.3
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.6e-13 80.1 183 38.8
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.6e-13 80.1 246 32.9
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-10 71.2 87 55.2
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-10 71.2 87 55.2
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.3e-09 67.0 190 36.3
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 2.2e-07 60.5 48 70.8


User provided reference genes

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