Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G285.3 Capsicum annuum HOM05D004601 ORTHO05D005806 4.0e-81 304.7 151 100.0
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.1e-60 234.6 132 90.9
Nitab4.5_0006199g0010 Nicotiana tabacum HOM05D004601 ORTHO05D005806 5.1e-60 234.6 132 90.9
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 3.6e-58 228.4 127 91.3
Sopen07g006910 Solanum pennellii HOM05D004601 ORTHO05D005806 2.4e-57 225.7 127 90.6
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 2.4e-57 225.7 127 90.6
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 7.6e-56 220.7 130 86.9
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 2.9e-47 192.2 110 85.5
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 2.1e-42 176.0 112 77.7
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 6.3e-42 174.5 111 78.4
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 1.1e-41 173.7 112 77.7
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 1.4e-41 173.3 110 80.0
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 1.4e-41 173.3 110 78.2
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.8e-41 172.9 111 77.5
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 1.8e-41 172.9 111 78.4
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.4e-41 172.6 111 77.5
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 2.4e-41 172.6 110 80.9
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 3.1e-41 172.2 111 78.4
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 3.1e-41 172.2 112 76.8
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 4.1e-41 171.8 111 76.6
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 4.1e-41 171.8 112 77.7
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 4.1e-41 171.8 110 76.4
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 4.1e-41 171.8 110 76.4
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 5.3e-41 171.4 110 79.1
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 6.9e-41 171.0 112 77.7
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 6.9e-41 171.0 112 77.7
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 9.0e-41 170.6 111 75.7
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 9.0e-41 170.6 112 76.8
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 1.2e-40 170.2 112 74.1
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 1.2e-40 170.2 112 77.7
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 1.2e-40 170.2 112 77.7
ECA236G3967 Erigeron canadensis HOM05D004601 ORTHO05D005806 1.2e-40 170.2 108 80.6
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 1.2e-40 170.2 111 77.5
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 1.5e-40 169.9 112 77.7
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 2.0e-40 169.5 111 74.8
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 2.0e-40 169.5 111 76.6
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 2.6e-40 169.1 112 76.8
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 2.6e-40 169.1 112 76.8
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 2.6e-40 169.1 110 76.4
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 4.5e-40 168.3 110 76.4
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 7.6e-40 167.5 112 76.8
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 7.6e-40 167.5 111 74.8
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 7.6e-40 167.5 111 74.8
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.3e-39 166.8 112 75.9
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 1.3e-39 166.8 112 75.0
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 1.3e-39 166.8 117 71.8
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 5.0e-39 164.9 110 73.6
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 6.5e-39 164.5 108 76.9
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 8.5e-39 164.1 109 70.6
Lalb_Chr00c63g0413841 Lupinus albus HOM05D004601 ORTHO05D005806 8.5e-39 164.1 111 73.9
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 8.5e-39 164.1 111 73.9
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 8.5e-39 164.1 109 70.6
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.9e-38 162.9 117 70.9
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 2.5e-38 162.5 111 73.9
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 3.2e-38 162.2 112 71.4
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 4.2e-38 161.8 111 75.7
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 4.2e-38 161.8 111 75.7
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 7.2e-38 161.0 111 73.0
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 9.3e-38 160.6 109 68.8
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 1.6e-37 159.8 111 72.1
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 2.7e-37 159.1 110 72.7
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 3.6e-37 158.7 112 73.2
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 4.6e-37 158.3 108 75.0
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 3.0e-36 155.6 111 71.2
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 3.9e-36 155.2 111 72.1
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 5.1e-36 154.8 111 70.3
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 5.1e-36 154.8 111 70.3
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 1.1e-35 153.7 113 69.9
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.1e-35 153.7 109 71.6
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 1.1e-35 153.7 111 72.1
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 1.5e-35 153.3 112 69.6
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 7.4e-35 151.0 111 68.5
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 1.3e-34 150.2 111 68.5
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 1.6e-34 149.8 108 70.4
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 1.6e-34 149.8 111 70.3
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 2.2e-34 149.4 111 68.5
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 3.7e-34 148.7 111 69.4
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 8.2e-34 147.5 111 70.3
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 2.4e-33 146.0 97 77.3
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 3.1e-33 145.6 112 65.2
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 3.1e-33 145.6 111 68.5
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 5.3e-33 144.8 111 66.7
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 9.1e-33 144.1 112 63.4
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.0e-31 140.6 109 66.1
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 1.0e-31 140.6 109 66.1
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.3e-31 140.2 112 62.5
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 1.1e-30 137.1 110 60.9
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 4.8e-26 121.7 114 53.5
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 5.3e-25 118.2 111 53.2
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 6.9e-25 117.9 112 55.4
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 4.5e-24 115.2 111 51.4
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 4.5e-24 115.2 111 52.3
Actinidia07546 Actinidia chinensis HOM05D004601 ORTHO05D005806 3.2e-22 109.0 69 72.5
CBR_g35050 Chara braunii HOM05D004601 ORTHO05D005806 2.1e-21 106.3 101 51.5
Rhsim01G0114900 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.1e-14 84.0 72 56.9
RhsimUnG0137600 Rhododendron simsii HOM05D004601 ORTHO05D005806 1.6e-13 80.1 64 60.9
BolC2t07510H Brassica oleracea HOM05D004601 ORTHO05D041326 8.0e-13 77.8 102 42.2
C02p13910 Brassica napus HOM05D004601 ORTHO05D041326 1.4e-12 77.0 102 41.2
Cc07_g18020 Coffea canephora HOM05D004601 ORTHO05D005806 2.8e-10 69.3 48 68.8
AagrBONN_evm.TU.Sc2ySwM_228.3225 Anthoceros agrestis HOM05D004601 ORTHO05D005806 1.4e-09 67.0 120 35.8
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 1.2e-08 63.9 75 44.0
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 1.7e-07 60.1 35 74.3
FAN10G0665 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.2e-07 59.7 35 77.1
SEGI_11293 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 8.5e-07 57.8 110 31.8
Sopen01g013210 Solanum pennellii HOM05D004601 ORTHO05D393442 8.5e-07 57.8 47 57.4
TAR383G0023 Trochodendron aralioides HOM05D004601 ORTHO05D005806 1.5e-06 57.0 37 67.6
Cfa023642 Carpinus fangiana HOM05D004601 ORTHO05D005806 9.4e-06 54.3 67 40.3


User provided reference genes

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