Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G279.6 Capsicum annuum HOM05D004484 ORTHO05D005370 7.2e-36 153.3 73 100.0
CAN.G594.7 Capsicum annuum HOM05D004484 ORTHO05D005370 2.2e-29 131.7 72 86.1
CAN.G388.13 Capsicum annuum HOM05D004484 ORTHO05D005370 7.2e-28 126.7 72 86.1
Solyc01g091350.4 Solanum lycopersicum HOM05D004484 ORTHO05D005370 7.2e-28 126.7 72 84.7
Sopen01g037090 Solanum pennellii HOM05D004484 ORTHO05D005370 7.2e-28 126.7 72 84.7
PGSC0003DMG400012761 Solanum tuberosum HOM05D004484 ORTHO05D005370 3.6e-27 124.4 72 84.7
Nitab4.5_0000457g0330 Nicotiana tabacum HOM05D004484 ORTHO05D005370 4.7e-27 124.0 72 83.3
Peaxi162Scf00021g01723 Petunia axillaris HOM05D004484 ORTHO05D005370 4.7e-27 124.0 72 83.3
Nitab4.5_0005372g0070 Nicotiana tabacum HOM05D004484 ORTHO05D005370 1.8e-26 122.1 72 81.9
CAN.G205.22 Capsicum annuum HOM05D004484 ORTHO05D005370 3.0e-26 121.3 73 79.5
SGA_v2.0_scaffold153G37012 Striga asiatica HOM05D004484 ORTHO05D005370 5.7e-25 117.1 72 77.8
Migut.B01635 Erythranthe guttata HOM05D004484 ORTHO05D005370 9.8e-25 116.3 72 80.6
MSTRG.20748 Avicennia marina HOM05D004484 ORTHO05D005370 2.2e-24 115.2 72 77.8
Dinv32377 Davidia involucrata HOM05D004484 ORTHO05D005370 2.2e-24 115.2 72 75.0
Lsat_1_v5_gn_4_43240 Lactuca sativa HOM05D004484 ORTHO05D005370 2.2e-24 115.2 72 76.4
Oeu055487.1 Olea europaea HOM05D004484 ORTHO05D005370 2.2e-24 115.2 72 76.4
CANSAT56G1200 Cannabis sativa HOM05D004484 ORTHO05D005370 2.8e-24 114.8 72 75.0
CANSAT56G4533 Cannabis sativa HOM05D004484 ORTHO05D005370 2.8e-24 114.8 72 75.0
QL08p052472 Quercus lobata HOM05D004484 ORTHO05D005370 3.7e-24 114.4 72 76.4
Ca_19886_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 4.9e-24 114.0 72 75.0
Potri.014G069700 Populus trichocarpa HOM05D004484 ORTHO05D005370 4.9e-24 114.0 72 75.0
vmacro13399 Vaccinium macrocarpon HOM05D004484 ORTHO05D005370 4.9e-24 114.0 72 76.4
GSVIVG01027610001 Vitis vinifera HOM05D004484 ORTHO05D005370 4.9e-24 114.0 72 73.6
Ca_27059_v3 Cicer arietinum L. HOM05D004484 ORTHO05D005370 6.3e-24 113.6 72 75.0
Cc02_g36700 Coffea canephora HOM05D004484 ORTHO05D005370 8.3e-24 113.2 72 77.8
MD07G1121000 Malus domestica HOM05D004484 ORTHO05D005370 1.1e-23 112.8 72 75.0
Prupe.2G145600 Prunus persica HOM05D004484 ORTHO05D005370 1.4e-23 112.5 72 73.6
ECA234G1700 Erigeron canadensis HOM05D004484 ORTHO05D005370 1.8e-23 112.1 72 73.6
Lj7A528T57 Lonicera japonica HOM05D004484 ORTHO05D005370 2.4e-23 111.7 72 72.2
Medtr4g023560 Medicago truncatula HOM05D004484 ORTHO05D005370 2.4e-23 111.7 72 72.2
ATR0049G077 Amborella trichopoda HOM05D004484 ORTHO05D005370 3.1e-23 111.3 72 73.6
Sabra14G0049400 Salix brachista HOM05D004484 ORTHO05D005370 4.1e-23 110.9 72 70.8
Aqoxy5G00403 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 5.4e-23 110.5 72 72.2
Eucgr.E01418 Eucalyptus grandis HOM05D004484 ORTHO05D005370 5.4e-23 110.5 72 72.2
Cfa001721 Carpinus fangiana HOM05D004484 ORTHO05D005370 7.0e-23 110.2 72 73.6
Haze_16815 Corylus avellana HOM05D004484 ORTHO05D005370 7.0e-23 110.2 72 73.6
DCAR_015907 Daucus carota HOM05D004484 ORTHO05D005370 9.1e-23 109.8 72 70.8
FAN06G1787 Fragaria x ananassa HOM05D004484 ORTHO05D005370 9.1e-23 109.8 72 70.8
FAN06G3319 Fragaria x ananassa HOM05D004484 ORTHO05D005370 9.1e-23 109.8 72 70.8
FAN10G1483 Fragaria x ananassa HOM05D004484 ORTHO05D005370 9.1e-23 109.8 72 70.8
FAN10G2369 Fragaria x ananassa HOM05D004484 ORTHO05D005370 9.1e-23 109.8 72 70.8
AT1G48050 Arabidopsis thaliana HOM05D004484 ORTHO05D005370 1.2e-22 109.4 72 73.6
Hma1.2p1_0701F.1_g205850 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 1.2e-22 109.4 72 75.0
SHI38996 Sapria himalayana HOM05D004484 ORTHO05D005370 1.2e-22 109.4 72 70.8
unitig_749.g13780 Utricularia gibba HOM05D004484 ORTHO05D005370 1.2e-22 109.4 72 75.0
Atru.chr5.309 Acer truncatum HOM05D004484 ORTHO05D005370 1.6e-22 109.0 72 73.6
arahy.Tifrunner.gnm1.ann1.5WGS6V Arachis hypogaea HOM05D004484 ORTHO05D005370 2.0e-22 108.6 72 69.4
CSS0036976 Camellia sinensis var. sinensis HOM05D004484 ORTHO05D005370 2.0e-22 108.6 72 75.0
Nn1g01233 Nelumbo nucifera HOM05D004484 ORTHO05D005370 2.0e-22 108.6 72 70.8
TAR629G2468 Trochodendron aralioides HOM05D004484 ORTHO05D005370 2.0e-22 108.6 72 72.2
C08p05620 Brassica napus HOM05D004484 ORTHO05D005370 2.7e-22 108.2 72 70.8
BolC8t47375H Brassica oleracea HOM05D004484 ORTHO05D005370 2.7e-22 108.2 72 70.8
Carub.0001s3716 Capsella rubella HOM05D004484 ORTHO05D005370 2.7e-22 108.2 72 72.2
TWI23G0227 Tripterygium wilfordii HOM05D004484 ORTHO05D005370 2.7e-22 108.2 72 69.4
Glyma.05G125700 Glycine max HOM05D004484 ORTHO05D005370 3.5e-22 107.8 72 70.8
Sc02g0002590 Simmondsia chinensis HOM05D004484 ORTHO05D005370 3.5e-22 107.8 72 70.8
arahy.Tifrunner.gnm1.ann1.6K85L9 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 69.4
arahy.Tifrunner.gnm1.ann1.HW1IVJ Arachis hypogaea HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 69.4
arahy.Tifrunner.gnm1.ann1.Q9SWB6 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 69.4
arahy.Tifrunner.gnm1.ann1.V1M046 Arachis hypogaea HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 69.4
CiPaw.01G262000 Carya illinoinensis HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 72.2
Ciclev10019016m.g Citrus clementina HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 75.0
FvH4_7g11900 Fragaria vesca HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 69.4
Hma1.2p1_0086F.1_g044870 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 75.0
Hma1.2p1_0086F.1_g044880 Hydrangea macrophylla HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 75.0
Lj3g0013484 Lotus japonicus HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 70.8
Psat7g233440 Pisum sativum HOM05D004484 ORTHO05D005370 4.5e-22 107.5 72 68.1
A08p05330 Brassica napus HOM05D004484 ORTHO05D005370 5.9e-22 107.1 72 69.4
BraSC267t45947Z Brassica rapa HOM05D004484 ORTHO05D005370 5.9e-22 107.1 72 69.4
Thhalv10011351m.g Eutrema salsugineum HOM05D004484 ORTHO05D005370 5.9e-22 107.1 72 70.8
FAN01G0628 Fragaria x ananassa HOM05D004484 ORTHO05D005370 5.9e-22 107.1 72 69.4
Sp1g35020 Schrenkiella parvula HOM05D004484 ORTHO05D005370 5.9e-22 107.1 72 70.8
BcaB04g17469 Brassica carinata HOM05D004484 ORTHO05D005370 7.7e-22 106.7 72 69.4
CDE04G3156 Ceratophyllum demersum HOM05D004484 ORTHO05D005370 7.7e-22 106.7 72 72.2
Manes.01G265900 Manihot esculenta HOM05D004484 ORTHO05D005370 7.7e-22 106.7 72 69.4
arahy.Tifrunner.gnm1.ann1.03ZR4A Arachis hypogaea HOM05D004484 ORTHO05D005370 1.0e-21 106.3 72 68.1
HanXRQChr16g0520161 Helianthus annuus HOM05D004484 ORTHO05D005370 1.0e-21 106.3 72 70.8
MBI12_g10758_MAGBIO Magnolia biondii HOM05D004484 ORTHO05D005370 1.0e-21 106.3 72 68.1
TPR.G22633 Trifolium pratense HOM05D004484 ORTHO05D005370 1.0e-21 106.3 72 68.1
HPP92_027818 Vanilla planifolia HOM05D004484 ORTHO05D005370 1.0e-21 106.3 72 70.8
PSO478G5008 Papaver somniferum HOM05D004484 ORTHO05D005370 1.3e-21 105.9 72 72.2
Potri.002G148200 Populus trichocarpa HOM05D004484 ORTHO05D005370 1.3e-21 105.9 72 69.4
PGR042G0667 Punica granatum HOM05D004484 ORTHO05D005370 1.3e-21 105.9 72 69.4
Lj9C569T11 Lonicera japonica HOM05D004484 ORTHO05D005370 1.7e-21 105.5 72 68.1
SHI13523 Sapria himalayana HOM05D004484 ORTHO05D005370 1.7e-21 105.5 72 69.4
Cpa.g.sc18.115 Carica papaya HOM05D004484 ORTHO05D005370 2.3e-21 105.1 72 69.4
THA.LOC104817247 Tarenaya hassleriana HOM05D004484 ORTHO05D005370 2.3e-21 105.1 72 68.1
BcaC07g37180 Brassica carinata HOM05D004484 ORTHO05D005370 2.9e-21 104.8 72 69.4
AL1G54570 Arabidopsis lyrata HOM05D004484 ORTHO05D005370 3.8e-21 104.4 72 69.4
ClCG05G002220 Citrullus lanatus HOM05D004484 ORTHO05D005370 3.8e-21 104.4 72 70.8
Lalb_Chr13g0291731 Lupinus albus HOM05D004484 ORTHO05D005370 3.8e-21 104.4 72 68.1
Ah.13g073490 Amaranthus hybridus HOM05D004484 ORTHO05D005370 5.0e-21 104.0 72 69.4
EL10Ac1g00900 Beta vulgaris HOM05D004484 ORTHO05D005370 5.0e-21 104.0 72 68.1
MELO3C006188.2 Cucumis melo HOM05D004484 ORTHO05D005370 5.0e-21 104.0 72 69.4
CsaV3_3G009680 Cucumis sativus L. HOM05D004484 ORTHO05D005370 5.0e-21 104.0 72 69.4
GSVIVG01027609001 Vitis vinifera HOM05D004484 ORTHO05D005370 5.0e-21 104.0 72 66.7
arahy.Tifrunner.gnm1.ann1.5492A7 Arachis hypogaea HOM05D004484 ORTHO05D005370 6.6e-21 103.6 72 65.3
arahy.Tifrunner.gnm1.ann1.T9R8PC Arachis hypogaea HOM05D004484 ORTHO05D005370 6.6e-21 103.6 72 65.3
FAN03G1897 Fragaria x ananassa HOM05D004484 ORTHO05D005370 6.6e-21 103.6 72 69.4
Aa31LG10G5650 Aethionema arabicum HOM05D004484 ORTHO05D005370 1.5e-20 102.4 72 66.7
Hund27347 Selenicereus undatus HOM05D004484 ORTHO05D005370 1.5e-20 102.4 73 69.9
Thecc.01G376200 Theobroma cacao HOM05D004484 ORTHO05D005370 1.5e-20 102.4 72 68.1
Gohir.A11G080700 Gossypium hirsutum HOM05D004484 ORTHO05D005370 3.3e-20 101.3 72 65.3
Lalb_Chr12g0208261 Lupinus albus HOM05D004484 ORTHO05D005370 3.3e-20 101.3 72 65.3
CARHR037700 Cardamine hirsuta HOM05D004484 ORTHO05D005370 7.2e-20 100.1 72 66.7
AUR62013627 Chenopodium quinoa HOM05D004484 ORTHO05D005370 9.5e-20 99.8 72 66.7
Phvul.002G205800 Phaseolus vulgaris HOM05D004484 ORTHO05D005370 9.5e-20 99.8 72 66.7
VMungo0251G1206 Vigna mungo HOM05D004484 ORTHO05D005370 9.5e-20 99.8 72 63.9
Aqoxy3G02138 Aquilegia oxysepala HOM05D004484 ORTHO05D005370 1.2e-19 99.4 72 66.7
COL.COLO4_07018 Corchorus olitorius HOM05D004484 ORTHO05D005370 1.2e-19 99.4 72 66.7
Sed0020955 Sechium edule HOM05D004484 ORTHO05D005370 1.2e-19 99.4 72 63.9
Zm00001eb064930 Zea mays HOM05D004484 ORTHO05D005370 1.2e-19 99.4 72 66.7
Gohir.D11G085300 Gossypium hirsutum HOM05D004484 ORTHO05D005370 2.8e-19 98.2 72 65.3
Gorai.007G091100 Gossypium raimondii HOM05D004484 ORTHO05D005370 2.8e-19 98.2 72 65.3
PGR119G1536 Punica granatum HOM05D004484 ORTHO05D005370 3.6e-19 97.8 72 65.3
AUR62004221 Chenopodium quinoa HOM05D004484 ORTHO05D005370 2.3e-18 95.1 73 65.8
SMO367G0514 Selaginella moellendorffii HOM05D004484 ORTHO05D005370 2.0e-14 82.0 72 56.9
SEGI_29754 Sequoiadendron giganteum HOM05D004484 ORTHO05D005370 3.5e-14 81.3 72 54.2
Pp3c22_11100 Physcomitrium patens HOM05D004484 ORTHO05D005370 2.9e-13 78.2 67 53.7
SHI38095 Sapria himalayana HOM05D004484 ORTHO05D005370 5.0e-13 77.4 50 70.0
Eucgr.I00725 Eucalyptus grandis HOM05D004484 ORTHO05D005370 6.6e-13 77.0 48 70.8
CBR_g30081 Chara braunii HOM05D004484 ORTHO05D005370 1.0e-10 69.7 69 46.4
Mapoly0129s0012 Marchantia polymorpha HOM05D004484 ORTHO05D005370 1.0e-10 69.7 67 50.7
AagrBONN_evm.TU.Sc2ySwM_368.3373 Anthoceros agrestis HOM05D004484 ORTHO05D005370 3.4e-09 64.7 61 45.9
TPR.G9845 Trifolium pratense HOM05D004484 ORTHO05D005370 5.4e-07 57.4 36 69.4
RcHm_v2.0_Chr1g0350571 Rosa chinensis HOM05D004484 ORTHO05D005370 1.2e-06 56.2 36 66.7
COL.COLO4_12548 Corchorus olitorius HOM05D004484 ORTHO05D005370 2.7e-06 55.1 36 63.9


User provided reference genes

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