Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1442.1 Capsicum annuum HOM05D005620 ORTHO05D002193 1.3e-91 339.7 171 100.0
CAN.G1237.2 Capsicum annuum HOM05D005620 ORTHO05D002193 9.5e-55 217.2 192 62.5
PGSC0003DMG403012723 Solanum tuberosum HOM05D005620 ORTHO05D002193 9.9e-52 207.2 188 62.2
Sopen04g008610 Solanum pennellii HOM05D005620 ORTHO05D002193 3.7e-51 205.3 188 60.6
Solyc04g016530.3 Solanum lycopersicum HOM05D005620 ORTHO05D002193 6.4e-51 204.5 188 60.6
Peaxi162Scf00130g01016 Petunia axillaris HOM05D005620 ORTHO05D002193 3.6e-46 188.7 185 57.3
Nitab4.5_0001618g0310 Nicotiana tabacum HOM05D005620 ORTHO05D002193 1.8e-45 186.4 191 56.5
Nitab4.5_0000826g0250 Nicotiana tabacum HOM05D005620 ORTHO05D002193 3.1e-45 185.7 185 58.9
Hma1.2p1_0056F.1_g031590 Hydrangea macrophylla HOM05D005620 ORTHO05D002193 1.1e-29 134.0 168 44.6
Oeu023137.3 Olea europaea HOM05D005620 ORTHO05D002193 2.9e-27 125.9 150 48.0
EL10Ac3g07159 Beta vulgaris HOM05D005620 ORTHO05D002193 4.9e-27 125.2 157 45.2
AUR62026123 Chenopodium quinoa HOM05D005620 ORTHO05D002193 8.4e-27 124.4 159 44.7
Dinv30296 Davidia involucrata HOM05D005620 ORTHO05D002193 2.4e-26 122.9 114 53.5
Actinidia09295 Actinidia chinensis HOM05D005620 ORTHO05D002193 3.2e-26 122.5 142 46.5
Sc13g0001490 Simmondsia chinensis HOM05D005620 ORTHO05D002193 4.2e-26 122.1 114 52.6
CSS0011392 Camellia sinensis var. sinensis HOM05D005620 ORTHO05D002193 7.1e-26 121.3 138 48.6
Lj2A390T38 Lonicera japonica HOM05D005620 ORTHO05D002193 1.6e-25 120.2 95 57.9
MBI19_g08310_MAGBIO Magnolia biondii HOM05D005620 ORTHO05D002193 3.0e-24 115.9 139 44.6
Sc19g0008380 Simmondsia chinensis HOM05D005620 ORTHO05D002193 3.0e-24 115.9 172 39.0
vmacro21954 Vaccinium macrocarpon HOM05D005620 ORTHO05D002193 3.0e-24 115.9 110 53.6
arahy.Tifrunner.gnm1.ann1.K8ZQW4 Arachis hypogaea HOM05D005620 ORTHO05D002193 5.1e-24 115.2 151 47.0
Nn7g36440 Nelumbo nucifera HOM05D005620 ORTHO05D002193 6.7e-24 114.8 175 39.4
arahy.Tifrunner.gnm1.ann1.VNMU4U Arachis hypogaea HOM05D005620 ORTHO05D002193 1.1e-23 114.0 156 44.9
Glyma.10G105800 Glycine max HOM05D005620 ORTHO05D002193 1.1e-23 114.0 129 49.6
Glyma.02G191100 Glycine max HOM05D005620 ORTHO05D002193 1.5e-23 113.6 129 50.4
TAR636G3531 Trochodendron aralioides HOM05D005620 ORTHO05D002193 1.9e-23 113.2 142 42.3
COL.COLO4_21299 Corchorus olitorius HOM05D005620 ORTHO05D002193 3.3e-23 112.5 139 46.8
GSVIVG01033553001 Vitis vinifera HOM05D005620 ORTHO05D002193 4.3e-23 112.1 152 40.8
MSTRG.10802 Avicennia marina HOM05D005620 ORTHO05D002193 5.6e-23 111.7 150 42.7
Lj5g0010383 Lotus japonicus HOM05D005620 ORTHO05D002193 5.6e-23 111.7 184 36.4
DCAR_019171 Daucus carota HOM05D005620 ORTHO05D002193 7.4e-23 111.3 165 43.6
Phvul.007G249300 Phaseolus vulgaris HOM05D005620 ORTHO05D002193 1.3e-22 110.5 153 41.8
SGA_v2.0_scaffold94G28513 Striga asiatica HOM05D005620 ORTHO05D002193 1.3e-22 110.5 162 42.0
CANSAT80G0060 Cannabis sativa HOM05D005620 ORTHO05D002193 1.6e-22 110.2 124 47.6
CANSAT80G0759 Cannabis sativa HOM05D005620 ORTHO05D002193 1.6e-22 110.2 149 43.0
ClCG10G015520 Citrullus lanatus HOM05D005620 ORTHO05D002193 2.1e-22 109.8 143 45.5
Ciclev10005485m.g Citrus clementina HOM05D005620 ORTHO05D002193 2.1e-22 109.8 78 62.8
Thecc.05G145200 Theobroma cacao HOM05D005620 ORTHO05D002193 2.1e-22 109.8 175 38.3
Thecc.K0006600 Theobroma cacao HOM05D005620 ORTHO05D002193 2.1e-22 109.8 175 38.3
Atru.chr1.1154_Atru.chr1.1155 Acer truncatum HOM05D005620 ORTHO05D002193 2.8e-22 109.4 187 40.1
CiPaw.09G042300 Carya illinoinensis HOM05D005620 ORTHO05D002193 3.7e-22 109.0 129 45.7
Cc06_g18370 Coffea canephora HOM05D005620 ORTHO05D002193 3.7e-22 109.0 144 46.5
ECA247G2062 Erigeron canadensis HOM05D005620 ORTHO05D002193 6.2e-22 108.2 156 41.0
PSO339G1912 Papaver somniferum HOM05D005620 ORTHO05D002193 6.2e-22 108.2 143 44.1
Psat6g118160 Pisum sativum HOM05D005620 ORTHO05D002193 6.2e-22 108.2 139 46.0
RcHm_v2.0_Chr3g0484531 Rosa chinensis HOM05D005620 ORTHO05D002193 6.2e-22 108.2 148 40.5
A03p23280 Brassica napus HOM05D005620 ORTHO05D002193 8.1e-22 107.8 141 44.7
BraA03t11547Z Brassica rapa HOM05D005620 ORTHO05D002193 8.1e-22 107.8 141 44.7
Lalb_Chr02g0156421 Lupinus albus HOM05D005620 ORTHO05D002193 8.1e-22 107.8 159 37.7
Cfa016753 Carpinus fangiana HOM05D005620 ORTHO05D002193 1.1e-21 107.5 165 38.2
Sp4g23730 Schrenkiella parvula HOM05D005620 ORTHO05D002193 1.1e-21 107.5 152 42.8
TWI53G0502 Tripterygium wilfordii HOM05D005620 ORTHO05D002193 1.4e-21 107.1 139 44.6
FvH4_6g24881 Fragaria vesca HOM05D005620 ORTHO05D002193 1.8e-21 106.7 158 43.7
Sed0006254 Sechium edule HOM05D005620 ORTHO05D002193 3.1e-21 105.9 149 45.6
Aa31LG1G23480 Aethionema arabicum HOM05D005620 ORTHO05D002193 5.3e-21 105.1 152 39.5
BcaB01g03467 Brassica carinata HOM05D005620 ORTHO05D002193 5.3e-21 105.1 171 38.6
Ca_25788_v3 Cicer arietinum L. HOM05D005620 ORTHO05D002193 5.3e-21 105.1 126 44.4
Lsat_1_v5_gn_9_32000 Lactuca sativa HOM05D005620 ORTHO05D002193 5.3e-21 105.1 141 43.3
Aqoxy5G03576 Aquilegia oxysepala HOM05D005620 ORTHO05D002193 6.9e-21 104.8 176 41.5
Cpa.g.sc120.9 Carica papaya HOM05D005620 ORTHO05D002193 6.9e-21 104.8 143 43.4
TWI53G0092 Tripterygium wilfordii HOM05D005620 ORTHO05D002193 6.9e-21 104.8 136 42.6
Prupe.7G050000 Prunus persica HOM05D005620 ORTHO05D002193 9.0e-21 104.4 155 42.6
Medtr1g051380 Medicago truncatula HOM05D005620 ORTHO05D002193 1.2e-20 104.0 186 36.6
THA.LOC104803289 Tarenaya hassleriana HOM05D002000 ORTHO05D002027 1.2e-20 104.0 153 40.5
MELO3C009829.2 Cucumis melo HOM05D005620 ORTHO05D002193 1.5e-20 103.6 143 43.4
MD12G1086000 Malus domestica HOM05D005620 ORTHO05D002193 2.6e-20 102.8 162 40.1
Os01g0801000 Oryza sativa ssp. japonica HOM05D005620 ORTHO05D002193 2.6e-20 102.8 170 41.2
BcaC01g05336 Brassica carinata HOM05D005620 ORTHO05D002193 3.4e-20 102.4 149 43.0
BolC3t15148H Brassica oleracea HOM05D005620 ORTHO05D002193 3.4e-20 102.4 149 43.0
CARHR136580 Cardamine hirsuta HOM05D005620 ORTHO05D002193 4.5e-20 102.1 132 44.7
Migut.K00117 Erythranthe guttata HOM05D005620 ORTHO05D002193 4.5e-20 102.1 136 45.6
AT2G41460 Arabidopsis thaliana HOM05D005620 ORTHO05D002193 5.8e-20 101.7 160 39.4
C03p27780 Brassica napus HOM05D005620 ORTHO05D002193 5.8e-20 101.7 154 42.9
CsaV3_3G040940 Cucumis sativus L. HOM05D005620 ORTHO05D002193 5.8e-20 101.7 158 42.4
Carub.0004s2376 Capsella rubella HOM05D005620 ORTHO05D002193 7.6e-20 101.3 152 38.2
Eucgr.K01579 Eucalyptus grandis HOM05D005620 ORTHO05D002193 7.6e-20 101.3 151 43.7
HanXRQChr10g0298661 Helianthus annuus HOM05D005620 ORTHO05D002193 7.6e-20 101.3 149 39.6
BolC4t28403H Brassica oleracea HOM05D005620 ORTHO05D002193 1.0e-19 100.9 127 45.7
Thhalv10016487m.g Eutrema salsugineum HOM05D005620 ORTHO05D002193 1.0e-19 100.9 165 37.6
C04p69060 Brassica napus HOM05D005620 ORTHO05D002193 1.3e-19 100.5 127 45.7
Sabra16G0047700 Salix brachista HOM05D005620 ORTHO05D002193 2.2e-19 99.8 144 42.4
CDE07G1402 Ceratophyllum demersum HOM05D005620 ORTHO05D002193 2.9e-19 99.4 141 39.7
FAN05G4287 Fragaria x ananassa HOM05D005620 ORTHO05D002193 2.9e-19 99.4 154 42.2
Gohir.D03G074900 Gossypium hirsutum HOM05D005620 ORTHO05D002193 3.8e-19 99.0 133 39.1
Gorai.003G086400 Gossypium raimondii HOM05D005620 ORTHO05D002193 3.8e-19 99.0 133 39.1
AL4G39540 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 4.9e-19 98.6 152 38.2
A04p31630 Brassica napus HOM05D005620 ORTHO05D002193 4.9e-19 98.6 190 38.4
Gohir.A02G123602 Gossypium hirsutum HOM05D005620 ORTHO05D002193 4.9e-19 98.6 144 39.6
Potri.016G042000 Populus trichocarpa HOM05D005620 ORTHO05D002193 4.9e-19 98.6 137 45.3
CDE04G0757 Ceratophyllum demersum HOM05D005620 ORTHO05D002193 6.5e-19 98.2 115 42.6
HPP92_016888 Vanilla planifolia HOM05D005620 ORTHO05D002193 8.4e-19 97.8 120 45.0
Aqoxy1G00331 Aquilegia oxysepala HOM05D005620 ORTHO05D002193 1.1e-18 97.4 134 43.3
BolC6t36428H Brassica oleracea HOM05D005620 ORTHO05D002193 1.1e-18 97.4 155 39.4
BraA04t18621Z Brassica rapa HOM05D005620 ORTHO05D002193 1.1e-18 97.4 154 38.3
BcaC06g34961 Brassica carinata HOM05D005620 ORTHO05D002193 1.9e-18 96.7 71 57.7
Duzib128G2038 Durio zibethinus HOM05D005620 ORTHO05D002193 3.2e-18 95.9 157 41.4
Manes.09G016000 Manihot esculenta HOM05D005620 ORTHO05D002193 3.2e-18 95.9 133 42.1
Pp3c14_3710 Physcomitrium patens HOM05D005620 ORTHO05D002193 9.3e-18 94.4 136 43.4
ATR0733G075 Amborella trichopoda HOM05D005620 ORTHO05D002193 3.5e-17 92.4 153 37.3
DCAR_019347 Daucus carota HOM05D005620 ORTHO05D002193 4.6e-17 92.0 70 57.1
SEGI_06428 Sequoiadendron giganteum HOM05D005620 ORTHO05D002193 5.1e-16 88.6 98 49.0
QL07p005073 Quercus lobata HOM05D005620 ORTHO05D002193 6.7e-16 88.2 88 47.7
AUR62024530 Chenopodium quinoa HOM05D005620 ORTHO05D002193 8.7e-16 87.8 142 38.7
Os01g0801100 Oryza sativa ssp. japonica HOM05D005620 ORTHO05D002193 8.7e-16 87.8 70 52.9
Mapoly0057s0088 Marchantia polymorpha HOM05D005620 ORTHO05D002193 1.3e-14 84.0 163 35.0
SMO145G0259 Selaginella moellendorffii HOM05D005620 ORTHO05D002193 1.3e-14 84.0 75 50.7
AagrBONN_evm.TU.Sc2ySwM_369.93 Anthoceros agrestis HOM05D005620 ORTHO05D002193 1.6e-14 83.6 84 48.8
Hund19124 Selenicereus undatus HOM05D005620 ORTHO05D002193 1.1e-13 80.9 173 33.5
Haze_19751 Corylus avellana HOM05D005620 ORTHO05D002193 3.1e-13 79.3 153 37.9
SHI24582 Sapria himalayana HOM05D005620 ORTHO05D002193 6.9e-13 78.2 68 51.5
COL.COLO4_33915 Corchorus olitorius HOM05D005620 ORTHO05D002193 1.9e-10 70.1 55 52.7
BolC6t38904H Brassica oleracea HOM05D005620 ORTHO05D002193 6.7e-08 61.6 49 59.2
BolC7t42658H Brassica oleracea HOM05D005620 ORTHO05D002193 9.7e-07 57.8 46 56.5
CBR_g30450 Chara braunii HOM05D005620 ORTHO05D002193 2.8e-06 56.2 94 37.2
AL4G39920 Arabidopsis lyrata HOM05D005620 ORTHO05D002193 4.8e-06 55.5 60 50.0


User provided reference genes

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