Gene: PGSC0003DMG403012723
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG403012723
- Transcript Identifier PGSC0003DMT400033137
- Gene Type Coding gene
- Location ST4.03ch04 : 11207164-11210094 : negative
Gene Family Information
- ID HOM05D005620
- #Genes/#Species 137/95
- Phylogenetic origin
- ID ORTHO05D002193
- #Genes/#Species 309/94
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pacid 37471851
- id PGSC0003DMG403012723.v4.03
- uniprot M1AYP0
Descriptions
- Description Apurinic endonuclease-redox protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006284 | IBA | GOA Database | base-excision repair | |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G41460 |
| GO:0033683 | ISO | PLAZA Integrative Orthology | nucleotide-excision repair, DNA incision | AT2G41460 |
| GO:0006281 | IEA | GOA Database | DNA repair | |
| GO:0006281 | IEA | InterPro | DNA repair | |
| GO:0090305 | IEA | GOA Database | nucleic acid phosphodiester bond hydrolysis |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016791 | ISO | PLAZA Integrative Orthology | phosphatase activity | AT2G41460 |
| GO:0003824 | ISO | PLAZA Homology (enrichment) | catalytic activity | HOM05D005620 |
| GO:0008408 | ISO | PLAZA Integrative Orthology | 3'-5' exonuclease activity | AT2G41460 |
| GO:0003906 | IBA | GOA Database | DNA-(apurinic or apyrimidinic site) endonuclease activity | |
| GO:0004528 | IBA | GOA Database | phosphodiesterase I activity | |
| GO:0004518 | IEA | GOA Database | nuclease activity | |
| GO:0004518 | IEA | InterPro | nuclease activity | |
| GO:0008311 | IBA | GOA Database | double-stranded DNA 3'-5' exodeoxyribonuclease activity | |
| GO:0004519 | IEA | GOA Database | endonuclease activity | |
| GO:0003677 | IEA | GOA Database | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042644 | ISO | PLAZA Integrative Orthology | chloroplast nucleoid | AT2G41460 |
| GO:0005634 | IBA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |