Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1353.4 Capsicum annuum HOM05D002048 ORTHO05D002146 6.9e-148 527.3 275 100.0
CAN.G1579.13 Capsicum annuum HOM05D002048 ORTHO05D002146 4.0e-63 245.7 199 71.4
CAN.G1353.29 Capsicum annuum HOM05D002048 ORTHO05D002146 1.9e-60 236.9 200 72.5
CAN.G309.100 Capsicum annuum HOM05D002496 ORTHO05D002787 1.7e-53 213.8 133 80.5
CAN.G309.143 Capsicum annuum HOM05D002496 ORTHO05D002630 3.5e-51 206.1 134 82.8
CAN.G134.157 Capsicum annuum HOM05D002496 ORTHO05D002787 6.0e-51 205.3 243 56.4
CAN.G1703.10 Capsicum annuum HOM05D002048 ORTHO05D002146 6.9e-47 191.8 198 60.1
CAN.G134.146 Capsicum annuum HOM05D002518 ORTHO05D002630 9.0e-47 191.4 318 44.3
CAN.G1353.19 Capsicum annuum HOM05D002496 ORTHO05D002787 3.4e-46 189.5 245 53.1
CAN.G309.112 Capsicum annuum HOM05D002048 ORTHO05D002146 7.1e-44 181.8 193 60.6
CAN.G309.120 Capsicum annuum HOM05D002048 ORTHO05D002146 9.3e-44 181.4 175 60.0
CAN.G1579.11 Capsicum annuum HOM05D002048 ORTHO05D002146 1.3e-42 177.6 174 59.2
CAN.G309.96 Capsicum annuum HOM05D002048 ORTHO05D002146 1.1e-41 174.5 165 62.4
CAN.G1353.6 Capsicum annuum HOM05D002048 ORTHO05D002146 1.3e-40 171.0 155 63.9
CAN.G134.147 Capsicum annuum HOM05D002048 ORTHO05D002146 6.3e-40 168.7 166 60.8
CAN.G309.136 Capsicum annuum HOM05D002048 ORTHO05D002146 2.0e-38 163.7 156 63.5
CAN.G309.125 Capsicum annuum HOM05D002496 ORTHO05D002787 7.6e-38 161.8 133 67.7
CAN.G309.139 Capsicum annuum HOM05D002048 ORTHO05D002146 1.9e-33 147.1 170 53.5
CAN.G134.155 Capsicum annuum HOM05D002048 ORTHO05D000001 7.7e-30 135.2 196 46.4
CAN.G2318.1 Capsicum annuum HOM05D002048 ORTHO05D002146 3.2e-28 129.8 74 87.8
CAN.G309.116 Capsicum annuum HOM05D002048 ORTHO05D002146 3.2e-28 129.8 198 47.0
CAN.G1353.18 Capsicum annuum HOM05D002048 ORTHO05D002146 7.9e-27 125.2 91 74.7
CAN.G309.109 Capsicum annuum HOM05D002048 ORTHO05D002146 3.9e-26 122.9 93 67.7
CAN.G309.117 Capsicum annuum HOM05D002048 ORTHO05D002146 5.3e-23 112.5 120 55.8
CAN.G1353.25 Capsicum annuum HOM05D002048 ORTHO05D002146 1.6e-19 100.9 112 54.5
CAN.G134.152 Capsicum annuum HOM05D002518 ORTHO05D002630 1.4e-18 97.8 115 50.4
CAN.G1353.13 Capsicum annuum HOM05D002048 ORTHO05D115676 5.7e-17 92.4 216 36.1
CAN.G309.99 Capsicum annuum HOM05D002496 ORTHO05D002787 4.8e-16 89.4 116 49.1
CAN.G134.150 Capsicum annuum HOM05D002048 ORTHO05D002146 5.3e-15 85.9 98 53.1
CAN.G1833.7 Capsicum annuum HOM05D002048 ORTHO05D002146 5.3e-15 85.9 73 61.6
CAN.G309.129 Capsicum annuum HOM05D002048 ORTHO05D002146 7.0e-15 85.5 75 61.3
CAN.G575.101 Capsicum annuum HOM05D002048 ORTHO05D002146 7.0e-15 85.5 73 61.6
CAN.G1353.2 Capsicum annuum HOM05D002048 ORTHO05D002146 9.1e-15 85.1 76 63.2
CAN.G309.93 Capsicum annuum HOM05D002048 ORTHO05D002146 1.2e-14 84.7 73 61.6
CAN.G1353.1 Capsicum annuum HOM05D002048 ORTHO05D002146 1.6e-14 84.3 46 91.3
CAN.G309.149 Capsicum annuum HOM05D002048 ORTHO05D002146 2.0e-14 84.0 243 32.9
CAN.G1353.20 Capsicum annuum HOM05D002048 ORTHO05D002630 4.5e-14 82.8 146 38.4
CAN.G1816.1 Capsicum annuum HOM05D002048 ORTHO05D002146 4.5e-14 82.8 144 38.2
CAN.G309.138 Capsicum annuum HOM05D002048 ORTHO05D002146 5.9e-14 82.4 46 89.1
Solyc11g044340.3 Solanum lycopersicum HOM05D002048 ORTHO05D002146 5.9e-14 82.4 132 42.4
Sopen11g019850 Solanum pennellii HOM05D002048 ORTHO05D002146 5.9e-14 82.4 132 42.4
CAN.G1703.13 Capsicum annuum HOM05D002048 ORTHO05D002146 7.7e-14 82.0 61 73.8
Peaxi162Scf00152g00644 Petunia axillaris HOM05D002048 ORTHO05D002146 2.2e-13 80.5 69 60.9
CAN.G1353.30 Capsicum annuum HOM05D002048 ORTHO05D002146 5.0e-13 79.3 47 87.2
Nitab4.5_0000001g0490 Nicotiana tabacum HOM05D002048 ORTHO05D002146 5.0e-13 79.3 69 60.9
CAN.G309.144 Capsicum annuum HOM05D002496 ORTHO05D002146 6.5e-13 79.0 43 90.7
CAN.G309.95 Capsicum annuum HOM05D002048 ORTHO05D002146 8.5e-13 78.6 46 87.0
CAN.G575.107 Capsicum annuum HOM05D002048 ORTHO05D002146 8.5e-13 78.6 68 61.8
CAN.G575.130 Capsicum annuum HOM05D002048 ORTHO05D002146 8.5e-13 78.6 67 61.2
CAN.G1353.5 Capsicum annuum HOM05D002048 ORTHO05D002146 1.1e-12 78.2 46 87.0
Nitab4.5_0001093g0090 Nicotiana tabacum HOM05D002048 ORTHO05D002146 1.5e-12 77.8 69 58.0
CAN.G309.147 Capsicum annuum HOM05D002048 ORTHO05D000377 1.9e-12 77.4 66 69.7
CAN.G134.156 Capsicum annuum HOM05D002048 ORTHO05D002146 5.5e-12 75.9 46 82.6
CAN.G1579.29 Capsicum annuum HOM05D002048 ORTHO05D002146 9.4e-12 75.1 46 80.4
CAN.G1353.8 Capsicum annuum HOM05D002048 ORTHO05D002146 1.2e-11 74.7 71 56.3
CAN.G575.100 Capsicum annuum HOM05D002048 ORTHO05D002146 1.6e-11 74.3 46 80.4
CAN.G1353.21 Capsicum annuum HOM05D002048 ORTHO05D002146 4.7e-11 72.8 71 56.3
CAN.G309.137 Capsicum annuum HOM05D002048 ORTHO05D002146 4.7e-11 72.8 46 78.3
CAN.G309.98 Capsicum annuum HOM05D002048 ORTHO05D002146 4.7e-11 72.8 47 74.5
CAN.G134.148 Capsicum annuum HOM05D002048 ORTHO05D002146 6.1e-11 72.4 125 38.4
CAN.G1703.11 Capsicum annuum HOM05D002048 ORTHO05D002146 6.1e-11 72.4 46 80.4
Thecc.02G119900 Theobroma cacao HOM05D002048 ORTHO05D002146 2.6e-09 67.0 69 49.3
Sc18g0007360 Simmondsia chinensis HOM05D002048 ORTHO05D002146 4.4e-09 66.2 85 35.3
Dinv09538 Davidia involucrata HOM05D002048 ORTHO05D002146 5.7e-09 65.9 85 41.2
CAN.G575.106 Capsicum annuum HOM05D002048 ORTHO05D002146 9.7e-09 65.1 46 73.9
TPR.G21140 Trifolium pratense HOM05D002048 ORTHO05D002146 9.7e-09 65.1 71 43.7
Sed0000428 Sechium edule HOM05D002048 ORTHO05D002146 1.3e-08 64.7 71 45.1
Gohir.D04G159700 Gossypium hirsutum HOM05D002048 ORTHO05D002146 2.8e-08 63.5 71 47.9
Gorai.012G147100 Gossypium raimondii HOM05D002048 ORTHO05D002146 2.8e-08 63.5 71 47.9
Lalb_Chr02g0144901 Lupinus albus HOM05D002048 ORTHO05D002146 2.8e-08 63.5 93 37.6
COL.COLO4_32485 Corchorus olitorius HOM05D002048 ORTHO05D002146 3.7e-08 63.2 74 44.6
Medtr1g106025 Medicago truncatula HOM05D002048 ORTHO05D002146 3.7e-08 63.2 71 45.1
CSS0035447 Camellia sinensis var. sinensis HOM05D002048 ORTHO05D002146 4.8e-08 62.8 83 41.0
Gohir.A04G118000 Gossypium hirsutum HOM05D002048 ORTHO05D002146 6.3e-08 62.4 71 47.9
CAN.G309.102 Capsicum annuum HOM05D002048 ORTHO05D002146 8.2e-08 62.0 38 78.9
ClCG10G010050 Citrullus lanatus HOM05D002048 ORTHO05D002146 8.2e-08 62.0 78 38.5
Duzib132G0903 Durio zibethinus HOM05D002048 ORTHO05D002146 8.2e-08 62.0 69 46.4
TWI59G0753 Tripterygium wilfordii HOM05D002048 ORTHO05D002146 8.2e-08 62.0 69 43.5
Ciclev10027741m.g Citrus clementina HOM05D002048 ORTHO05D002146 1.4e-07 61.2 85 36.5
DCAR_028524 Daucus carota HOM05D002048 ORTHO05D002146 1.8e-07 60.8 75 38.7
Glyma.10G255700 Glycine max HOM05D002048 ORTHO05D002146 1.8e-07 60.8 71 45.1
Nn5g30660 Nelumbo nucifera HOM05D002048 ORTHO05D002146 2.4e-07 60.5 71 39.4
TAR381G0254 Trochodendron aralioides HOM05D002048 ORTHO05D002146 3.1e-07 60.1 71 43.7
MELO3C018022.2 Cucumis melo HOM05D002048 ORTHO05D002146 4.1e-07 59.7 71 40.8
Cpa.g.sc91.57 Carica papaya HOM05D002048 ORTHO05D002146 5.3e-07 59.3 71 42.3
Prupe.8G150300 Prunus persica HOM05D002048 ORTHO05D002146 5.3e-07 59.3 71 42.3
Cc02_g20050 Coffea canephora HOM05D002048 ORTHO05D002146 7.0e-07 58.9 66 50.0
Nn6g34523 Nelumbo nucifera HOM05D002048 ORTHO05D002146 7.0e-07 58.9 71 42.3
VMungo0720G0973 Vigna mungo HOM05D002048 ORTHO05D002146 7.0e-07 58.9 71 43.7
CsaV3_4G000090 Cucumis sativus L. HOM05D002048 ORTHO05D002146 9.1e-07 58.5 71 39.4
Phvul.007G047100 Phaseolus vulgaris HOM05D002048 ORTHO05D002146 9.1e-07 58.5 74 43.2
Sabra16G0181400 Salix brachista HOM05D002048 ORTHO05D002146 9.1e-07 58.5 76 42.1
TAR625G1475 Trochodendron aralioides HOM05D002048 ORTHO05D002146 9.1e-07 58.5 71 40.8
AUR62027023 Chenopodium quinoa HOM05D002048 ORTHO05D002146 1.2e-06 58.2 85 35.3
Manes.10G086900 Manihot esculenta HOM05D002048 ORTHO05D002146 1.2e-06 58.2 71 39.4
Potri.014G013100 Populus trichocarpa HOM05D002048 ORTHO05D002146 1.2e-06 58.2 69 43.5
Actinidia02440 Actinidia chinensis HOM05D002048 ORTHO05D002146 1.6e-06 57.8 66 43.9
AUR62022344 Chenopodium quinoa HOM05D002048 ORTHO05D002146 1.6e-06 57.8 71 40.8
Lalb_Chr06g0164981 Lupinus albus HOM05D002048 ORTHO05D002146 1.6e-06 57.8 83 36.1
Psat6g213120 Pisum sativum HOM05D002048 ORTHO05D002146 1.6e-06 57.8 71 39.4
Sc26g0004230 Simmondsia chinensis HOM05D002048 ORTHO05D002146 1.6e-06 57.8 108 34.3
Dinv44932 Davidia involucrata HOM05D002048 ORTHO05D002146 2.0e-06 57.4 71 42.3
Lj9A337T45 Lonicera japonica HOM05D002048 ORTHO05D002146 2.0e-06 57.4 73 41.1
Ciclev10027732m.g Citrus clementina HOM05D002048 ORTHO05D002146 2.7e-06 57.0 85 35.3
CAN.G1677.7 Capsicum annuum HOM05D000070 ORTHO05D002524 3.5e-06 56.6 34 70.6
MD05G1105600 Malus domestica HOM05D002048 ORTHO05D002146 3.5e-06 56.6 70 40.0
CAN.G1353.14 Capsicum annuum HOM05D002048 ORTHO05D002146 4.5e-06 56.2 30 86.7
Thhalv10011212m.g Eutrema salsugineum HOM05D002048 ORTHO05D002146 4.5e-06 56.2 66 45.5
Sabra09G0065600 Salix brachista HOM05D002048 ORTHO05D002146 4.5e-06 56.2 71 39.4
Glyma.20G135800 Glycine max HOM05D002048 ORTHO05D002146 5.9e-06 55.8 71 43.7
Lsat_1_v5_gn_6_111581 Lactuca sativa HOM05D002048 ORTHO05D002146 5.9e-06 55.8 70 37.1
Manes.18G049300 Manihot esculenta HOM05D002048 ORTHO05D002146 5.9e-06 55.8 69 40.6
Potri.009G085400 Populus trichocarpa HOM05D002048 ORTHO05D002146 5.9e-06 55.8 71 38.0
BcaC08g42888 Brassica carinata HOM05D002048 ORTHO05D002146 7.7e-06 55.5 66 42.4
C06p01090 Brassica napus HOM05D002048 ORTHO05D002146 7.7e-06 55.5 66 42.4
CARHR036140 Cardamine hirsuta HOM05D002048 ORTHO05D002146 7.7e-06 55.5 66 45.5
vmacro01946 Vaccinium macrocarpon HOM05D002048 ORTHO05D002146 7.7e-06 55.5 79 38.0


User provided reference genes

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