Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C09p61570 Brassica napus HOM05D003939 ORTHO05D005979 1.1e-43 179.5 84 100.0
A10p23410 Brassica napus HOM05D003939 ORTHO05D005979 4.9e-36 154.1 79 94.9
BraA10t44409Z Brassica rapa HOM05D003939 ORTHO05D005979 4.9e-36 154.1 79 94.9
C09p61660 Brassica napus HOM05D003939 ORTHO05D005979 1.4e-35 152.5 79 94.9
BolC9t59004H Brassica oleracea HOM05D003939 ORTHO05D005979 1.4e-35 152.5 79 94.9
Sp6g28560 Schrenkiella parvula HOM05D003939 ORTHO05D005979 7.8e-34 146.7 79 89.9
CARHR197770 Cardamine hirsuta HOM05D003939 ORTHO05D005979 2.3e-33 145.2 79 88.6
Aa31LG11G14050 Aethionema arabicum HOM05D003939 ORTHO05D005979 6.6e-33 143.7 79 86.1
AT5G15540 Arabidopsis thaliana HOM05D003939 ORTHO05D005979 6.6e-33 143.7 78 88.5
BolC2t06707H Brassica oleracea HOM05D003939 ORTHO05D005979 6.6e-33 143.7 79 87.3
AL6G26400 Arabidopsis lyrata HOM05D003939 ORTHO05D005979 1.5e-32 142.5 78 87.2
C02p07770 Brassica napus HOM05D003939 ORTHO05D005979 1.5e-32 142.5 79 86.1
Thhalv10012417m.g Eutrema salsugineum HOM05D003939 ORTHO05D005979 1.5e-32 142.5 79 87.3
Carub.0006s1371 Capsella rubella HOM05D003939 ORTHO05D005979 2.5e-32 141.7 79 86.1
A02p03080 Brassica napus HOM05D003939 ORTHO05D005979 1.2e-31 139.4 79 87.3
BraA02t05278Z Brassica rapa HOM05D003939 ORTHO05D005979 1.2e-31 139.4 79 87.3
BolC9t58997H Brassica oleracea HOM05D003939 ORTHO05D005979 1.4e-30 136.0 64 100.0
THA.LOC104821002 Tarenaya hassleriana HOM05D003939 ORTHO05D005979 4.0e-30 134.4 79 81.0
COL.COLO4_21400 Corchorus olitorius HOM05D003939 ORTHO05D005979 1.3e-28 129.4 79 77.2
Thecc.04G092900 Theobroma cacao HOM05D003939 ORTHO05D005979 2.9e-28 128.3 79 77.2
Duzib264G0523 Durio zibethinus HOM05D003939 ORTHO05D005979 8.3e-28 126.7 79 75.9
Manes.01G097400 Manihot esculenta HOM05D003939 ORTHO05D005979 1.1e-27 126.3 79 74.7
Gohir.A09G010200 Gossypium hirsutum HOM05D003939 ORTHO05D005979 2.4e-27 125.2 79 75.9
Gorai.006G011000 Gossypium raimondii HOM05D003939 ORTHO05D005979 2.4e-27 125.2 79 75.9
Lalb_Chr06g0175001 Lupinus albus HOM05D003939 ORTHO05D005979 4.1e-27 124.4 79 72.2
MSTRG.3009 Avicennia marina HOM05D003939 ORTHO05D005979 9.2e-27 123.2 78 74.4
Nitab4.5_0001637g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 9.2e-27 123.2 78 71.8
Nitab4.5_0002960g0010 Nicotiana tabacum HOM05D003939 ORTHO05D005979 9.2e-27 123.2 78 71.8
Prupe.3G256700 Prunus persica HOM05D003939 ORTHO05D005979 9.2e-27 123.2 78 73.1
arahy.Tifrunner.gnm1.ann1.HNPA74 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.2e-26 122.9 79 70.9
arahy.Tifrunner.gnm1.ann1.U2J8P8 Arachis hypogaea HOM05D003939 ORTHO05D005979 1.2e-26 122.9 79 70.9
Sabra17G0081700 Salix brachista HOM05D003939 ORTHO05D005979 1.2e-26 122.9 79 72.2
Potri.017G092600 Populus trichocarpa HOM05D003939 ORTHO05D005979 1.6e-26 122.5 79 72.2
Atru.chr8.419 Acer truncatum HOM05D003939 ORTHO05D005979 2.0e-26 122.1 79 72.2
Cfa007652 Carpinus fangiana HOM05D003939 ORTHO05D005979 2.0e-26 122.1 79 70.9
Haze_14442 Corylus avellana HOM05D003939 ORTHO05D005979 2.0e-26 122.1 79 70.9
Dinv33821 Davidia involucrata HOM05D003939 ORTHO05D005979 2.0e-26 122.1 78 67.9
Cc07_g03930 Coffea canephora HOM05D003939 ORTHO05D005979 2.7e-26 121.7 78 74.4
GSVIVG01011514001 Vitis vinifera HOM05D003939 ORTHO05D005979 2.7e-26 121.7 79 72.2
MD09G1064300 Malus domestica HOM05D003939 ORTHO05D005979 3.5e-26 121.3 78 74.4
Duzib187G1101 Durio zibethinus HOM05D003939 ORTHO05D005979 4.6e-26 120.9 79 72.2
Migut.H00638 Erythranthe guttata HOM05D003939 ORTHO05D005979 6.0e-26 120.6 78 73.1
Solyc03g059420.4 Solanum lycopersicum HOM05D003939 ORTHO05D005979 6.0e-26 120.6 78 71.8
Sopen03g014250 Solanum pennellii HOM05D003939 ORTHO05D005979 6.0e-26 120.6 78 71.8
MBI19_g03793_MAGBIO Magnolia biondii HOM05D003939 ORTHO05D005979 7.8e-26 120.2 79 72.2
Phvul.004G035100 Phaseolus vulgaris HOM05D003939 ORTHO05D005979 7.8e-26 120.2 79 69.6
Oeu007060.1 Olea europaea HOM05D003939 ORTHO05D005979 1.0e-25 119.8 78 70.5
SGA_v2.0_scaffold52G19175 Striga asiatica HOM05D003939 ORTHO05D005979 1.3e-25 119.4 78 73.1
Aqoxy3G03594 Aquilegia oxysepala HOM05D003939 ORTHO05D005979 1.7e-25 119.0 79 68.4
PSO013G0104 Papaver somniferum HOM05D003939 ORTHO05D005979 1.7e-25 119.0 78 67.9
ClCG07G007360 Citrullus lanatus HOM05D003939 ORTHO05D005979 2.3e-25 118.6 79 69.6
Ciclev10010894m.g Citrus clementina HOM05D003939 ORTHO05D005979 2.3e-25 118.6 79 69.6
Sc10g0004620 Simmondsia chinensis HOM05D003939 ORTHO05D005979 2.3e-25 118.6 79 65.8
CsaV3_4G008740 Cucumis sativus L. HOM05D003939 ORTHO05D005979 3.0e-25 118.2 79 69.6
VMungo0464G1977 Vigna mungo HOM05D003939 ORTHO05D005979 3.0e-25 118.2 79 68.4
Lj2g0019419 Lotus japonicus HOM05D003939 ORTHO05D005979 3.9e-25 117.9 79 68.4
QL02p067905 Quercus lobata HOM05D003939 ORTHO05D005979 3.9e-25 117.9 79 68.4
Rhsim10G0043700 Rhododendron simsii HOM05D003939 ORTHO05D005979 3.9e-25 117.9 82 65.9
MD17G1057600 Malus domestica HOM05D003939 ORTHO05D005979 5.0e-25 117.5 78 70.5
Peaxi162Scf00451g00326 Petunia axillaris HOM05D003939 ORTHO05D005979 5.0e-25 117.5 79 69.6
CSS0011135 Camellia sinensis var. sinensis HOM05D003939 ORTHO05D005979 6.6e-25 117.1 78 69.2
CAN.G381.1 Capsicum annuum HOM05D003939 ORTHO05D005979 6.6e-25 117.1 78 69.2
Glyma.13G057300 Glycine max HOM05D003939 ORTHO05D005979 6.6e-25 117.1 79 67.1
PGR083G1596 Punica granatum HOM05D003939 ORTHO05D005979 6.6e-25 117.1 78 70.5
Ah.10g032070 Amaranthus hybridus HOM05D003939 ORTHO05D005979 8.6e-25 116.7 79 67.1
DCAR_025422 Daucus carota HOM05D003939 ORTHO05D005979 8.6e-25 116.7 78 67.9
EL10Ac2g03123 Beta vulgaris HOM05D003939 ORTHO05D005979 1.1e-24 116.3 79 65.8
SHI25772 Sapria himalayana HOM05D003939 ORTHO05D005979 1.1e-24 116.3 79 65.8
ATR0064G076 Amborella trichopoda HOM05D003939 ORTHO05D005979 1.5e-24 115.9 79 69.6
AUR62018173 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.5e-24 115.9 79 65.8
AUR62042423 Chenopodium quinoa HOM05D003939 ORTHO05D005979 1.5e-24 115.9 79 65.8
vmacro05651 Vaccinium macrocarpon HOM05D003939 ORTHO05D005979 1.5e-24 115.9 78 69.2
Medtr6g015060 Medicago truncatula HOM05D003939 ORTHO05D005979 1.9e-24 115.5 79 65.8
Psat1g067400 Pisum sativum HOM05D003939 ORTHO05D005979 2.5e-24 115.2 79 64.6
TWI60G0125 Tripterygium wilfordii HOM05D003939 ORTHO05D005979 2.5e-24 115.2 79 67.1
Sed0008583 Sechium edule HOM05D003939 ORTHO05D005979 3.3e-24 114.8 79 67.1
SEGI_00927 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 5.6e-24 114.0 78 66.7
Hund13156 Selenicereus undatus HOM05D003939 ORTHO05D005979 9.5e-24 113.2 79 65.8
TPR.G10018 Trifolium pratense HOM05D003939 ORTHO05D005979 9.5e-24 113.2 79 65.8
TAR371G0557 Trochodendron aralioides HOM05D003939 ORTHO05D005979 1.2e-23 112.8 79 67.1
Lju41A4T71 Lonicera japonica HOM05D003939 ORTHO05D005979 1.6e-23 112.5 75 65.3
MELO3C016065.2 Cucumis melo HOM05D003939 ORTHO05D005979 2.1e-23 112.1 84 65.5
HPP92_012299 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.1e-23 112.1 79 67.1
Nn3g17411 Nelumbo nucifera HOM05D003939 ORTHO05D005979 2.8e-23 111.7 79 63.3
HPP92_012254 Vanilla planifolia HOM05D003939 ORTHO05D005979 2.8e-23 111.7 79 67.1
PSO063G3321 Papaver somniferum HOM05D003939 ORTHO05D005979 4.7e-23 110.9 78 64.1
Eucgr.J01370 Eucalyptus grandis HOM05D003939 ORTHO05D005979 6.2e-23 110.5 78 67.9
Actinidia01988 Actinidia chinensis HOM05D003939 ORTHO05D005979 1.1e-22 109.8 78 65.4
CANSAT64G0725 Cannabis sativa HOM05D003939 ORTHO05D005979 1.4e-22 109.4 77 66.2
ECA246G3607 Erigeron canadensis HOM05D003939 ORTHO05D005979 1.8e-22 109.0 78 66.7
HanXRQChr17g0546541 Helianthus annuus HOM05D003939 ORTHO05D005979 2.3e-22 108.6 78 67.9
Lsat_1_v5_gn_3_98161 Lactuca sativa HOM05D003939 ORTHO05D005979 2.3e-22 108.6 78 65.4
Ca_04301_v3 Cicer arietinum L. HOM05D003939 ORTHO05D005979 4.0e-22 107.8 79 62.0
Pp3c15_14600 Physcomitrium patens HOM05D003939 ORTHO05D005979 4.0e-22 107.8 67 67.2
SEGI_04445 Sequoiadendron giganteum HOM05D003939 ORTHO05D005979 4.0e-22 107.8 71 66.2
RcHm_v2.0_Chr2g0166131 Rosa chinensis HOM05D003939 ORTHO05D005979 8.9e-22 106.7 78 65.4
Mapoly0011s0050 Marchantia polymorpha HOM05D003939 ORTHO05D005979 1.2e-21 106.3 72 62.5
FAN14G2443 Fragaria x ananassa HOM05D003939 ORTHO05D005979 2.6e-21 105.1 78 65.4
FvH4_6g47080 Fragaria vesca HOM05D003939 ORTHO05D005979 3.4e-21 104.8 78 65.4
FAN02G0596 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.4e-21 104.8 78 64.1
FAN09G4101 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.4e-21 104.8 78 64.1
Gohir.D09G009300 Gossypium hirsutum HOM05D003939 ORTHO05D005979 9.9e-21 103.2 68 72.1
AagrBONN_evm.TU.Sc2ySwM_344.3096 Anthoceros agrestis HOM05D003939 ORTHO05D005979 1.7e-20 102.4 67 65.7
FAN05G1397 Fragaria x ananassa HOM05D003939 ORTHO05D005979 3.7e-20 101.3 78 64.1
Os07g0110400 Oryza sativa ssp. japonica HOM05D003939 ORTHO05D005979 6.4e-20 100.5 79 63.3
Zm00001eb118180 Zea mays HOM05D003939 ORTHO05D005979 8.3e-20 100.1 79 59.5
Zm00001eb298600 Zea mays HOM05D003939 ORTHO05D005979 8.3e-20 100.1 79 59.5
SMO116G0168 Selaginella moellendorffii HOM05D003939 ORTHO05D005979 2.3e-17 92.0 73 61.6
CBR_g19320 Chara braunii HOM05D003939 ORTHO05D005979 1.8e-14 82.4 78 51.3


User provided reference genes

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