Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p49260 Brassica napus HOM05D007027 ORTHO05D008765 2.2e-182 642.1 317 100.0
BolC8t52461H Brassica oleracea HOM05D007027 ORTHO05D008765 5.0e-182 641.0 317 99.7
A09p65310 Brassica napus HOM05D007027 ORTHO05D008765 2.8e-177 625.2 317 97.5
Thhalv10007981m.g Eutrema salsugineum HOM05D007027 ORTHO05D008765 6.3e-161 570.9 317 88.6
AT1G09800 Arabidopsis thaliana HOM05D007027 ORTHO05D008765 6.5e-158 560.8 325 85.8
BcaC05g24848 Brassica carinata HOM05D007027 ORTHO05D008765 2.1e-156 555.8 316 86.4
CARHR009790 Cardamine hirsuta HOM05D007027 ORTHO05D008765 2.7e-156 555.4 325 85.5
BcaC07g41859 Brassica carinata HOM05D007027 ORTHO05D008765 2.3e-155 552.4 318 88.7
AL1G20380 Arabidopsis lyrata HOM05D007027 ORTHO05D008765 1.1e-152 543.5 355 78.6
Carub.0001s0916 Capsella rubella HOM05D007027 ORTHO05D008765 1.1e-152 543.5 324 84.3
Sp1g08410 Schrenkiella parvula HOM05D007027 ORTHO05D008765 1.9e-149 532.7 321 83.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 2.5e-149 532.3 309 84.8
THA.LOC104816809 Tarenaya hassleriana HOM05D007027 ORTHO05D008765 1.0e-147 526.9 318 81.8
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 1.8e-147 526.2 306 83.0
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 5.2e-147 524.6 305 84.6
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 6.8e-147 524.2 306 83.0
CSS0028981 Camellia sinensis var. sinensis HOM05D007027 ORTHO05D008765 1.8e-136 489.6 327 73.1
Cpa.g.sc113.45 Carica papaya HOM05D007027 ORTHO05D008765 3.1e-136 488.8 322 74.5
GSVIVG01023249001 Vitis vinifera HOM05D007027 ORTHO05D008765 9.2e-136 487.3 325 73.2
Duzib132G0056 Durio zibethinus HOM05D007027 ORTHO05D008765 2.7e-135 485.7 327 72.5
MD15G1435400 Malus domestica HOM05D007027 ORTHO05D008765 1.0e-134 483.8 316 74.4
Gohir.D01G174800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 1.3e-134 483.4 328 73.2
TAR381G1092 Trochodendron aralioides HOM05D007027 ORTHO05D008765 2.9e-134 482.3 316 74.1
Gorai.002G216900 Gossypium raimondii HOM05D007027 ORTHO05D008765 6.6e-134 481.1 328 73.2
Dinv07482 Davidia involucrata HOM05D007027 ORTHO05D008765 1.6e-132 476.5 328 72.6
Gohir.A01G183800 Gossypium hirsutum HOM05D007027 ORTHO05D008765 3.6e-132 475.3 329 72.9
MD08G1241400 Malus domestica HOM05D007027 ORTHO05D008765 1.0e-131 473.8 314 73.2
Manes.07G024000 Manihot esculenta HOM05D007027 ORTHO05D008765 1.2e-130 470.3 323 71.8
Cfa004487 Carpinus fangiana HOM05D007027 ORTHO05D008765 1.5e-130 469.9 329 70.8
Rhsim11G0122600 Rhododendron simsii HOM05D007027 ORTHO05D008765 7.5e-130 467.6 348 67.8
RcHm_v2.0_Chr5g0060601 Rosa chinensis HOM05D007027 ORTHO05D008765 7.5e-130 467.6 312 72.8
Nitab4.5_0000787g0210 Nicotiana tabacum HOM05D007027 ORTHO05D008765 9.8e-130 467.2 325 70.8
FvH4_3g33250 Fragaria vesca HOM05D007027 ORTHO05D008765 4.9e-129 464.9 313 71.6
FAN16G3401 Fragaria x ananassa HOM05D007027 ORTHO05D008765 4.9e-129 464.9 313 71.6
Solyc01g103560.3 Solanum lycopersicum HOM05D007027 ORTHO05D008765 6.4e-129 464.5 325 69.5
CAN.G855.3 Capsicum annuum HOM05D007027 ORTHO05D008765 1.1e-128 463.8 325 69.5
Nitab4.5_0004106g0030 Nicotiana tabacum HOM05D007027 ORTHO05D008765 1.1e-128 463.8 325 70.2
CiPaw.05G004800 Carya illinoinensis HOM05D007027 ORTHO05D008765 1.4e-128 463.4 329 70.2
FAN25G1584 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.8e-128 463.0 313 71.6
CiPaw.06G173600 Carya illinoinensis HOM05D007027 ORTHO05D008765 2.4e-128 462.6 321 71.3
QL02p100436 Quercus lobata HOM05D007027 ORTHO05D008765 2.4e-128 462.6 327 71.9
Cc02_g23170 Coffea canephora HOM05D007027 ORTHO05D008765 3.2e-128 462.2 319 71.2
PGSC0003DMG400024892 Solanum tuberosum HOM05D007027 ORTHO05D008765 3.2e-128 462.2 325 69.8
PGR142G1179 Punica granatum HOM05D007027 ORTHO05D008765 7.0e-128 461.1 319 71.8
Ca_00043_v3 Cicer arietinum L. HOM05D007027 ORTHO05D008765 9.2e-128 460.7 322 71.4
HanXRQChr09g0249131 Helianthus annuus HOM05D007027 ORTHO05D008765 1.6e-127 459.9 324 71.9
Sopen01g045910 Solanum pennellii HOM05D007027 ORTHO05D008765 7.8e-127 457.6 325 69.5
CANSAT54G3047 Cannabis sativa HOM05D007027 ORTHO05D008765 1.7e-126 456.4 318 69.5
Atru.chr6.497 Acer truncatum HOM05D007027 ORTHO05D008765 2.3e-126 456.1 317 70.7
Nn5g27423 Nelumbo nucifera HOM05D007027 ORTHO05D008765 2.3e-126 456.1 320 69.7
CsaV3_5G029790 Cucumis sativus L. HOM05D007027 ORTHO05D008765 3.9e-126 455.3 318 70.4
Potri.003G008500 Populus trichocarpa HOM05D007027 ORTHO05D008765 3.9e-126 455.3 325 70.5
Aqoxy3G00475 Aquilegia oxysepala HOM05D007027 ORTHO05D008765 6.6e-126 454.5 329 68.7
SalBow7G1849 Salvia bowleyana HOM05D007027 ORTHO05D008765 6.6e-126 454.5 327 67.6
Migut.B00775 Erythranthe guttata HOM05D007027 ORTHO05D008765 1.1e-125 453.8 319 70.2
MELO3C011820.2 Cucumis melo HOM05D007027 ORTHO05D008765 4.3e-125 451.8 335 68.4
Glyma.12G167000 Glycine max HOM05D007027 ORTHO05D008765 4.3e-125 451.8 329 68.7
Actinidia00176 Actinidia chinensis HOM05D007027 ORTHO05D008765 7.3e-125 451.1 316 69.9
MBI03_g18680_MAGBIO Magnolia biondii HOM05D007027 ORTHO05D008765 9.5e-125 450.7 346 65.3
Glyma.16G003100 Glycine max HOM05D007027 ORTHO05D008765 8.0e-124 447.6 329 68.4
FAN11G0675 Fragaria x ananassa HOM05D007027 ORTHO05D008765 1.4e-123 446.8 349 64.2
Lj5C266T4 Lonicera japonica HOM05D007027 ORTHO05D008765 5.2e-123 444.9 316 69.0
Oeu064602.3 Olea europaea HOM05D007027 ORTHO05D008765 6.8e-123 444.5 364 62.4
Os12g0194800 Oryza sativa ssp. japonica HOM05D007027 ORTHO05D008765 6.8e-123 444.5 325 67.7
TPR.G2122 Trifolium pratense HOM05D007027 ORTHO05D008765 2.6e-122 442.6 322 69.3
Psat1g222360 Pisum sativum HOM05D007027 ORTHO05D008765 4.4e-122 441.8 322 68.3
ECA233G3768 Erigeron canadensis HOM05D007027 ORTHO05D008765 9.8e-122 440.7 319 69.3
Medtr2g005830 Medicago truncatula HOM05D007027 ORTHO05D008765 2.2e-121 439.5 324 67.0
Sabra03G0004200 Salix brachista HOM05D007027 ORTHO05D008765 4.9e-121 438.3 349 64.2
SGA_v2.0_scaffold304G47919 Striga asiatica HOM05D007027 ORTHO05D008765 1.4e-120 436.8 345 63.2
Lalb_Chr20g0123691 Lupinus albus HOM05D007027 ORTHO05D008765 2.4e-120 436.0 324 69.8
Prupe.1G579000 Prunus persica HOM05D007027 ORTHO05D008765 4.1e-120 435.3 316 69.3
VMungo0540G1081 Vigna mungo HOM05D007027 ORTHO05D008765 4.1e-120 435.3 326 66.9
DCAR_006671 Daucus carota HOM05D007027 ORTHO05D008765 5.4e-120 434.9 326 65.6
EL10Ac6g14111 Beta vulgaris HOM05D007027 ORTHO05D008765 1.2e-119 433.7 314 69.1
COL.COLO4_17723 Corchorus olitorius HOM05D007027 ORTHO05D008765 2.7e-119 432.6 325 66.2
Hund15459 Selenicereus undatus HOM05D007027 ORTHO05D008765 3.9e-118 428.7 313 68.4
Haze_10044 Corylus avellana HOM05D007027 ORTHO05D008765 5.0e-118 428.3 428 54.4
Ciclev10001491m.g Citrus clementina HOM05D007027 ORTHO05D008765 6.6e-118 427.9 315 68.3
TWI23G0132 Tripterygium wilfordii HOM05D007027 ORTHO05D008765 1.1e-117 427.2 332 66.6
arahy.Tifrunner.gnm1.ann1.BAUB6M Arachis hypogaea HOM05D007027 ORTHO05D008765 1.5e-117 426.8 318 65.1
arahy.Tifrunner.gnm1.ann1.3G44QY Arachis hypogaea HOM05D007027 ORTHO05D008765 2.5e-117 426.0 318 66.0
PSO170G1275 Papaver somniferum HOM05D007027 ORTHO05D008765 3.3e-117 425.6 327 63.9
Thecc.02G018500 Theobroma cacao HOM05D007027 ORTHO05D008765 3.3e-117 425.6 315 67.6
Zm00001eb138750 Zea mays HOM05D007027 ORTHO05D008765 2.1e-116 422.9 326 64.7
PSO017G0894 Papaver somniferum HOM05D007027 ORTHO05D008765 1.4e-115 420.2 328 63.1
unitig_699.g19848 Utricularia gibba HOM05D007027 ORTHO05D008765 1.4e-115 420.2 319 64.6
vmacro01711 Vaccinium macrocarpon HOM05D007027 ORTHO05D008765 6.8e-115 417.9 369 60.4
ATR1136G089 Amborella trichopoda HOM05D007027 ORTHO05D008765 1.5e-114 416.8 312 66.7
FAN21G1550 Fragaria x ananassa HOM05D007027 ORTHO05D008765 5.8e-114 414.8 313 66.5
Lj6g0019688 Lotus japonicus HOM05D007027 ORTHO05D008765 2.7e-111 406.0 313 64.2
Lj6g0023928 Lotus japonicus HOM05D007027 ORTHO05D008765 2.7e-111 406.0 313 64.2
Eucgr.I02764 Eucalyptus grandis HOM05D007027 ORTHO05D008765 1.9e-104 383.3 264 69.3
AUR62043952 Chenopodium quinoa HOM05D007027 ORTHO05D008765 6.6e-102 374.8 312 62.5
Pp3c1_13020 Physcomitrium patens HOM05D007027 ORTHO05D008765 2.4e-99 366.3 312 58.7
Sed0027668 Sechium edule HOM05D007027 ORTHO05D008765 2.9e-97 359.4 267 67.0
Mapoly0016s0042 Marchantia polymorpha HOM05D007027 ORTHO05D008765 1.5e-93 347.1 316 56.3
SMO118G0354 Selaginella moellendorffii HOM05D007027 ORTHO05D008765 7.6e-90 334.7 313 53.7
Phvul.006G218900 Phaseolus vulgaris HOM05D007027 ORTHO05D008765 1.4e-88 330.5 210 74.8
HPP92_013442 Vanilla planifolia HOM05D007027 ORTHO05D008765 1.2e-87 327.4 279 60.2
ClCG11G013270 Citrullus lanatus HOM05D007027 ORTHO05D008765 2.1e-87 326.6 316 55.7
Sc07g0005100 Simmondsia chinensis HOM05D007027 ORTHO05D008765 1.9e-85 320.1 266 62.0
Aa31LG1G5150 Aethionema arabicum HOM05D007027 ORTHO05D008765 8.1e-76 288.1 167 80.2
CBR_g30061 Chara braunii HOM05D007027 ORTHO05D008765 6.9e-75 285.0 452 39.6
HPP92_013441 Vanilla planifolia HOM05D007027 ORTHO05D008765 3.8e-73 279.3 180 70.6
CDE05G2927 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 3.0e-62 243.0 139 79.9
AUR62028254 Chenopodium quinoa HOM05D007027 ORTHO05D008765 1.5e-58 230.7 187 60.4
MCO02G420 Micromonas commoda HOM05D007027 ORTHO05D008765 1.8e-54 217.2 372 37.6
Lsat_1_v5_gn_9_120240 Lactuca sativa HOM05D007027 ORTHO05D008765 4.4e-53 212.6 128 78.1
Peaxi162Scf00011g01224 Petunia axillaris HOM05D007027 ORTHO05D008765 2.5e-48 196.8 224 51.3
Migut.B00774 Erythranthe guttata HOM05D007027 ORTHO05D008765 2.0e-42 177.2 98 81.6
CDE05G0566 Ceratophyllum demersum HOM05D007027 ORTHO05D008765 3.8e-33 146.4 137 54.0
RcHm_v2.0_Chr3g0481081 Rosa chinensis HOM05D007027 ORTHO05D008765 3.2e-32 143.3 79 81.0
SMO361G0559 Selaginella moellendorffii HOM05D006708 ORTHO05D008321 8.8e-22 108.6 325 27.7
Mapoly0209s0002 Marchantia polymorpha HOM05D006708 ORTHO05D008321 1.4e-19 101.3 317 26.5
AagrBONN_evm.TU.Sc2ySwM_228.1603 Anthoceros agrestis HOM05D006708 ORTHO05D008321 3.5e-18 96.7 316 27.2
Pp3c21_5420 Physcomitrium patens HOM05D006708 ORTHO05D008321 1.0e-17 95.1 323 25.7
Cre09.g405150 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 2.5e-16 90.5 329 27.1
MCO13G233 Micromonas commoda HOM05D006708 ORTHO05D008321 4.3e-16 89.7 326 27.9
PGSC0003DMG400027203 Solanum tuberosum HOM05D006708 ORTHO05D008321 5.6e-16 89.4 317 27.4
Oeu022711.1 Olea europaea HOM05D006708 ORTHO05D008321 7.3e-16 89.0 204 28.9
SalBow2G2621 Salvia bowleyana HOM05D006708 ORTHO05D008321 1.6e-15 87.8 197 30.5
Solyc05g053190.3 Solanum lycopersicum HOM05D006708 ORTHO05D008321 8.0e-15 85.5 315 27.0
Sopen05g031700 Solanum pennellii HOM05D006708 ORTHO05D008321 8.0e-15 85.5 320 26.9
Lsat_1_v5_gn_1_39980 Lactuca sativa HOM05D006708 ORTHO05D008321 1.4e-14 84.7 324 25.0
CAN.G305.34 Capsicum annuum HOM05D006708 ORTHO05D008321 3.0e-14 83.6 319 26.6
Nitab4.5_0000745g0080 Nicotiana tabacum HOM05D006708 ORTHO05D008321 5.2e-14 82.8 317 25.9
ATR0796G062 Amborella trichopoda HOM05D006708 ORTHO05D008321 6.8e-14 82.4 319 24.8
CSS0037344 Camellia sinensis var. sinensis HOM05D006708 ORTHO05D008321 8.9e-14 82.0 325 23.4
Peaxi162Scf00164g00315 Petunia axillaris HOM05D006708 ORTHO05D008321 8.9e-14 82.0 317 24.6
TPR.G12542 Trifolium pratense HOM05D006708 ORTHO05D008321 8.9e-14 82.0 202 29.2
HanXRQChr10g0293331 Helianthus annuus HOM05D006708 ORTHO05D008321 1.2e-13 81.6 322 24.5
Rhsim12G0000100 Rhododendron simsii HOM05D006708 ORTHO05D007921 1.5e-13 81.3 200 28.0
Ca_21374_v3 Cicer arietinum L. HOM05D006708 ORTHO05D008321 2.6e-13 80.5 205 27.3
Cre13.g591501 Chlamydomonas reinhardtii HOM05D006708 ORTHO05D008321 4.4e-13 79.7 330 25.8
Ciclev10005313m.g Citrus clementina HOM05D006708 ORTHO05D008321 4.4e-13 79.7 200 27.5
PSO761G0290 Papaver somniferum HOM05D006708 ORTHO05D008321 4.4e-13 79.7 201 29.4
CBR_g55386 Chara braunii HOM05D006708 ORTHO05D008321 5.7e-13 79.3 322 26.4
SEGI_30443 Sequoiadendron giganteum HOM05D007027 ORTHO05D008765 7.5e-13 79.0 51 72.5
Actinidia02537 Actinidia chinensis HOM05D006708 ORTHO05D008321 9.8e-13 78.6 200 27.0
Cc03_g00080 Coffea canephora HOM05D006708 ORTHO05D008321 1.7e-12 77.8 200 28.0
Manes.03G212000 Manihot esculenta HOM05D006708 ORTHO05D008321 2.9e-12 77.0 205 26.3
arahy.Tifrunner.gnm1.ann1.H7T0W5 Arachis hypogaea HOM05D006708 ORTHO05D008321 4.9e-12 76.3 316 23.1
arahy.Tifrunner.gnm1.ann1.YU479Z Arachis hypogaea HOM05D006708 ORTHO05D008321 4.9e-12 76.3 316 23.1
Glyma.17G041000 Glycine max HOM05D006708 ORTHO05D008321 1.1e-11 75.1 202 26.7
TWI53G0094 Tripterygium wilfordii HOM05D006708 ORTHO05D008321 3.2e-11 73.6 200 29.0
Zm00001eb245280 Zea mays HOM05D006708 ORTHO05D008321 7.0e-11 72.4 325 24.9
ECA233G5482 Erigeron canadensis HOM05D006708 ORTHO05D008321 1.3e-09 68.2 305 24.9
Nitab4.5_0001769g0170 Nicotiana tabacum HOM05D006708 ORTHO05D008321 2.3e-09 67.4 300 24.3
PRCOL_00002295 Prasinoderma coloniale HOM05D006708 ORTHO05D008321 2.8e-07 60.5 152 29.6
SEGI_32206 Sequoiadendron giganteum HOM05D006708 ORTHO05D008321 1.8e-06 57.8 98 30.6


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