Gene: Cc03_g00080
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc03_g00080
- Transcript Identifier Cc03_g00080.1
- Gene Type Coding gene
- Location chr3 : 48239-50455 : negative
Gene Family Information
- ID HOM05D006708
- #Genes/#Species 120/94
- Phylogenetic origin
- ID ORTHO05D008321
- #Genes/#Species 120/94
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB D7T696
- UniProtKB I1LYF8
- UniProtKB G7JR09
- UniProtKB B2G8U7
- UniProtKB Q6MEE7
- UniProtKB A5VLH4
- id GSCOCG00025581001
Descriptions
- Description Putative tRNA pseudouridine synthase A 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0001522 | IEA | InterPro | pseudouridine synthesis | |
| GO:0009451 | IEA | InterPro | RNA modification |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0009982 | IEA | InterPro | pseudouridine synthase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020095 | Pseudouridine synthase I, TruA, C-terminal |
| IPR001406 | Pseudouridine synthase I, TruA |
| IPR020097 | Pseudouridine synthase I, TruA, alpha/beta domain |
| IPR020094 | Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal |
| IPR020103 | Pseudouridine synthase, catalytic domain superfamily |
| Mapman id | Description |
|---|---|
| 16.5.3.1 | RNA processing.RNA modification.pseudouridylation.tRNA pseudouridine synthase (TruA) |