Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C08p00420 Brassica napus HOM05D004820 ORTHO05D005946 1.1e-189 666.8 416 100.0
BolC8t46841H Brassica oleracea HOM05D004820 ORTHO05D005946 6.9e-184 647.5 419 97.9
BraA08t35645Z Brassica rapa HOM05D004820 ORTHO05D005946 2.5e-173 612.5 430 92.1
A08p37470 Brassica napus HOM05D004820 ORTHO05D005946 4.2e-173 611.7 430 91.9
BolC8t52807H Brassica oleracea HOM05D004820 ORTHO05D005946 6.5e-166 587.8 419 83.5
C08p52910 Brassica napus HOM05D004820 ORTHO05D005946 8.5e-166 587.4 422 82.7
A09p68340 Brassica napus HOM05D004820 ORTHO05D005946 1.6e-164 583.2 421 77.4
CARHR002470 Cardamine hirsuta HOM05D004820 ORTHO05D005946 9.1e-160 567.4 339 85.8
Carub.0001s0228 Capsella rubella HOM05D004820 ORTHO05D005946 2.7e-159 565.8 335 86.6
Sp1g02160 Schrenkiella parvula HOM05D004820 ORTHO05D005946 6.5e-158 561.2 426 81.7
Thhalv10009621m.g Eutrema salsugineum HOM05D004820 ORTHO05D005946 1.5e-157 560.1 326 88.0
AL1G12610 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 1.4e-155 553.5 432 70.8
BcaC07g42265 Brassica carinata HOM05D004820 ORTHO05D005946 7.5e-154 547.7 419 73.7
AT1G03140 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 1.3e-153 547.0 331 85.2
Aa31LG1G9390 Aethionema arabicum HOM05D004820 ORTHO05D005946 1.6e-148 530.0 440 67.5
THA.LOC104815940 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 1.0e-139 500.7 431 66.4
THA.LOC104801242 Tarenaya hassleriana HOM05D004820 ORTHO05D005946 5.8e-138 495.0 422 68.7
Gohir.D08G075000 Gossypium hirsutum HOM05D004820 ORTHO05D005946 5.4e-136 488.4 422 65.6
Eucgr.K03365 Eucalyptus grandis HOM05D004820 ORTHO05D005946 9.2e-136 487.6 418 69.6
CANSAT25G3765 Cannabis sativa HOM05D004820 ORTHO05D005946 1.2e-135 487.3 334 74.9
TWI14G0518 Tripterygium wilfordii HOM05D004820 ORTHO05D005946 1.9e-133 479.9 425 64.2
Lj4g0024215 Lotus japonicus HOM05D004820 ORTHO05D005946 4.3e-133 478.8 416 65.9
Cpa.g.sc52.45 Carica papaya HOM05D004820 ORTHO05D005946 7.3e-133 478.0 328 77.1
Glyma.03G155000 Glycine max HOM05D004820 ORTHO05D005946 9.5e-133 477.6 416 62.5
Gorai.004G079300 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.2e-132 477.2 424 66.0
Manes.01G206900 Manihot esculenta HOM05D004820 ORTHO05D005946 1.2e-132 477.2 417 66.9
Ciclev10020348m.g Citrus clementina HOM05D004820 ORTHO05D005946 1.6e-132 476.9 333 77.8
Duzib211G0468 Durio zibethinus HOM05D004820 ORTHO05D005946 1.6e-132 476.9 419 71.1
VMungo1383G2933 Vigna mungo HOM05D004820 ORTHO05D005946 2.8e-132 476.1 416 65.1
Gohir.A08G066300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 3.6e-132 475.7 339 75.2
Duzib138G0452 Durio zibethinus HOM05D004820 ORTHO05D005946 4.7e-132 475.3 427 64.2
QL12p021397 Quercus lobata HOM05D004820 ORTHO05D005946 1.1e-131 474.2 416 66.3
SGA_v2.0_scaffold81G26015 Striga asiatica HOM05D004820 ORTHO05D005946 1.1e-131 474.2 421 65.6
Thecc.01G277300 Theobroma cacao HOM05D004820 ORTHO05D005946 1.1e-131 474.2 419 67.8
Glyma.19G157200 Glycine max HOM05D004820 ORTHO05D005946 1.4e-131 473.8 430 61.2
Gorai.004G216400 Gossypium raimondii HOM05D004820 ORTHO05D005946 2.3e-131 473.0 429 65.0
CsaV3_7G028060 Cucumis sativus L. HOM05D004820 ORTHO05D005946 3.1e-131 472.6 332 75.0
Medtr7g095000 Medicago truncatula HOM05D004820 ORTHO05D005946 3.1e-131 472.6 416 68.8
TPR.G9917 Trifolium pratense HOM05D004820 ORTHO05D005946 4.0e-131 472.2 416 65.6
TAR362G1079 Trochodendron aralioides HOM05D004820 ORTHO05D005946 4.0e-131 472.2 339 73.2
Atru.chr5.1456 Acer truncatum HOM05D004820 ORTHO05D005946 5.2e-131 471.9 329 74.5
Nn4g26288 Nelumbo nucifera HOM05D004820 ORTHO05D005946 6.8e-131 471.5 424 62.5
Gohir.A08G186300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 8.9e-131 471.1 429 64.8
Phvul.005G035400 Phaseolus vulgaris HOM05D004820 ORTHO05D005946 8.9e-131 471.1 331 77.9
Gohir.D08G204400 Gossypium hirsutum HOM05D004820 ORTHO05D005946 1.2e-130 470.7 429 64.8
Sed0001544 Sechium edule HOM05D004820 ORTHO05D005946 1.2e-130 470.7 333 77.5
Psat3g064000 Pisum sativum HOM05D004820 ORTHO05D005946 1.5e-130 470.3 416 70.2
arahy.Tifrunner.gnm1.ann1.NQ54M2 Arachis hypogaea HOM05D004820 ORTHO05D005946 5.8e-130 468.4 340 73.8
arahy.Tifrunner.gnm1.ann1.JHLY8X Arachis hypogaea HOM05D004820 ORTHO05D005946 9.8e-130 467.6 340 73.8
PGR044G0684 Punica granatum HOM05D004820 ORTHO05D005946 9.8e-130 467.6 418 69.4
Ca_08606_v3 Cicer arietinum L. HOM05D004820 ORTHO05D005946 1.3e-129 467.2 416 68.0
Migut.N02046 Erythranthe guttata HOM05D004820 ORTHO05D005946 1.3e-129 467.2 422 62.3
arahy.Tifrunner.gnm1.ann1.HALK3W Arachis hypogaea HOM05D004820 ORTHO05D005946 2.2e-129 466.5 340 73.5
Solyc09g065280.4 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.1e-128 464.2 348 71.8
Sopen09g027030 Solanum pennellii HOM05D004820 ORTHO05D005946 1.1e-128 464.2 348 71.6
PSO210G1690 Papaver somniferum HOM05D004820 ORTHO05D005946 1.4e-128 463.8 411 64.5
Actinidia00769 Actinidia chinensis HOM05D004820 ORTHO05D005946 4.1e-128 462.2 342 71.9
CiPaw.08G106000 Carya illinoinensis HOM05D004820 ORTHO05D005946 4.1e-128 462.2 328 71.6
MELO3C015826.2 Cucumis melo HOM05D004820 ORTHO05D005946 5.4e-128 461.8 433 65.6
Cc03_g10020 Coffea canephora HOM05D004820 ORTHO05D005946 7.1e-128 461.5 419 66.8
Lalb_Chr06g0162971 Lupinus albus HOM05D004820 ORTHO05D005946 9.2e-128 461.1 423 64.3
PGSC0003DMG400019362 Solanum tuberosum HOM05D004820 ORTHO05D005946 9.2e-128 461.1 348 71.0
arahy.Tifrunner.gnm1.ann1.X2D3U2 Arachis hypogaea HOM05D004820 ORTHO05D005946 2.7e-127 459.5 340 73.8
PSO761G0350 Papaver somniferum HOM05D004820 ORTHO05D005946 2.7e-127 459.5 411 60.6
MD03G1263300 Malus domestica HOM05D004820 ORTHO05D005946 2.3e-126 456.4 328 72.6
Oeu041704.1 Olea europaea HOM05D004820 ORTHO05D005946 2.3e-126 456.4 333 71.8
Potri.005G210600 Populus trichocarpa HOM05D004820 ORTHO05D005946 3.0e-126 456.1 335 72.8
CAN.G590.6 Capsicum annuum HOM05D004820 ORTHO05D005946 3.9e-126 455.7 350 70.3
AL1G45340 Arabidopsis lyrata HOM05D004820 ORTHO05D005946 1.1e-125 454.1 423 64.1
MSTRG.17449 Avicennia marina HOM05D004820 ORTHO05D005946 2.5e-125 453.0 332 74.7
EL10Ac8g18597 Beta vulgaris HOM05D004820 ORTHO05D005946 3.3e-125 452.6 417 60.2
Sabra05G0160800 Salix brachista HOM05D004820 ORTHO05D005946 5.6e-125 451.8 333 71.5
MD11G1284100 Malus domestica HOM05D004820 ORTHO05D005946 1.2e-124 450.7 325 72.0
CSS0006431 Camellia sinensis var. sinensis HOM05D004820 ORTHO05D005946 1.6e-124 450.3 312 74.0
Prupe.8G239700 Prunus persica HOM05D004820 ORTHO05D005946 1.8e-123 446.8 313 73.8
Sc05g0005630 Simmondsia chinensis HOM05D004820 ORTHO05D005946 1.8e-123 446.8 420 59.3
HanXRQChr01g0003021 Helianthus annuus HOM05D004820 ORTHO05D005946 1.3e-121 440.7 398 71.9
AUR62012894 Chenopodium quinoa HOM05D004820 ORTHO05D005946 2.2e-121 439.9 416 63.2
HPP92_018354 Vanilla planifolia HOM05D004820 ORTHO05D005946 2.9e-121 439.5 326 68.1
Lsat_1_v5_gn_5_187781 Lactuca sativa HOM05D004820 ORTHO05D005946 4.9e-121 438.7 400 67.2
Ah.01g024010 Amaranthus hybridus HOM05D004820 ORTHO05D005946 6.4e-121 438.3 418 64.4
RcHm_v2.0_Chr6g0290841 Rosa chinensis HOM05D004820 ORTHO05D005946 6.4e-121 438.3 329 69.3
FAN15G1635 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.9e-120 436.8 329 69.3
FAN20G0972 Fragaria x ananassa HOM05D004820 ORTHO05D005946 1.9e-120 436.8 329 69.3
FvH4_2g23380 Fragaria vesca HOM05D004820 ORTHO05D005946 2.4e-120 436.4 329 69.3
SpUn0083_0020 Schrenkiella parvula HOM05D004820 ORTHO05D005946 3.2e-120 436.0 413 61.7
AUR62027118 Chenopodium quinoa HOM05D004820 ORTHO05D005946 4.6e-119 432.2 418 59.8
FAN27G0992 Fragaria x ananassa HOM05D004820 ORTHO05D005946 2.3e-118 429.9 338 67.5
FAN24G1940 Fragaria x ananassa HOM05D004820 ORTHO05D005946 4.3e-117 425.6 347 65.7
SEGI_11361 Sequoiadendron giganteum HOM05D004820 ORTHO05D005946 6.9e-115 418.3 347 63.4
Sp5g11480 Schrenkiella parvula HOM05D004820 ORTHO05D005946 1.5e-114 417.2 375 62.4
ECA248G2754 Erigeron canadensis HOM05D004820 ORTHO05D005946 1.4e-112 410.6 392 64.0
Lj4g0011679 Lotus japonicus HOM05D004820 ORTHO05D005946 1.7e-110 403.7 396 64.9
Zm00001eb324990 Zea mays HOM05D004820 ORTHO05D005946 1.7e-110 403.7 348 65.5
Pp3c21_19780 Physcomitrium patens HOM05D004820 ORTHO05D005946 3.9e-110 402.5 355 61.7
Os07g0571900 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 8.7e-110 401.4 340 68.2
Zm00001eb426860 Zea mays HOM05D004820 ORTHO05D005946 3.3e-109 399.4 347 63.7
QL03p020183 Quercus lobata HOM05D004820 ORTHO05D005946 4.3e-109 399.1 302 73.8
Mapoly0140s0012 Marchantia polymorpha HOM05D004820 ORTHO05D005946 1.3e-108 397.5 348 60.9
Zm00001eb426810 Zea mays HOM05D004820 ORTHO05D005946 2.1e-108 396.7 348 63.2
Zm00001eb426800 Zea mays HOM05D004820 ORTHO05D005946 6.9e-107 391.7 347 62.5
Zm00001eb426820 Zea mays HOM05D004820 ORTHO05D005946 1.3e-105 387.5 347 62.8
Zm00001eb426850 Zea mays HOM05D004820 ORTHO05D005946 9.3e-104 381.3 326 63.2
AT1G54590 Arabidopsis thaliana HOM05D004820 ORTHO05D005946 7.9e-103 378.3 296 70.3
SMO356G0463 Selaginella moellendorffii HOM05D004820 ORTHO05D005946 3.6e-100 369.4 324 60.5
Rhsim01G0274100 Rhododendron simsii HOM05D004820 ORTHO05D005946 8.4e-97 358.2 289 71.6
PGSC0003DMG400010602 Solanum tuberosum HOM05D004820 ORTHO05D005946 5.5e-96 355.5 340 60.3
PGSC0003DMG400010600 Solanum tuberosum HOM05D004820 ORTHO05D005946 7.1e-96 355.1 340 61.5
Lalb_Chr02g0142711 Lupinus albus HOM05D004820 ORTHO05D005946 4.8e-92 342.4 220 78.6
Zm00001eb216840 Zea mays HOM05D004820 ORTHO05D005946 1.7e-89 334.0 316 57.9
CBR_g23335 Chara braunii HOM05D004820 ORTHO05D005946 1.8e-86 323.9 347 53.9
Solyc07g052190.1 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.7e-81 307.4 280 61.8
COL.COLO4_09079 Corchorus olitorius HOM05D004820 ORTHO05D005946 3.3e-77 293.1 362 49.7
GSVIVG01001158001 Vitis vinifera HOM05D004820 ORTHO05D005946 6.3e-68 262.3 161 83.2
Zm00001eb426870 Zea mays HOM05D004820 ORTHO05D005946 3.1e-67 260.0 166 79.5
CAN.G198.19 Capsicum annuum HOM05D004820 ORTHO05D005946 7.7e-66 255.4 243 59.7
Sopen07g025700 Solanum pennellii HOM05D004820 ORTHO05D005946 1.0e-65 255.0 239 61.1
Sopen07g025830 Solanum pennellii HOM05D004820 ORTHO05D005946 6.1e-63 245.7 264 55.7
Oeu028072.3 Olea europaea HOM05D004820 ORTHO05D005946 3.0e-62 243.4 194 66.0
Cpa.g.sc52.46 Carica papaya HOM05D004820 ORTHO05D005946 2.2e-57 227.3 138 84.8
SHI31236 Sapria himalayana HOM05D004820 ORTHO05D005946 6.5e-57 225.7 276 48.2
Solyc07g052050.2 Solanum lycopersicum HOM05D004820 ORTHO05D005946 1.6e-55 221.1 158 71.5
SHI31234 Sapria himalayana HOM05D004820 ORTHO05D005946 1.2e-53 214.9 120 87.5
HanXRQChr15g0487721 Helianthus annuus HOM05D004820 ORTHO05D005946 8.5e-49 198.7 168 60.7
Zm00001eb426830 Zea mays HOM05D004820 ORTHO05D005946 2.3e-46 190.7 118 83.1
Sopen07g025690 Solanum pennellii HOM05D004820 ORTHO05D005946 1.3e-44 184.9 130 74.6
Lj1g0027313 Lotus japonicus HOM05D004820 ORTHO05D005946 9.5e-40 168.7 159 56.0
MCO06G052 Micromonas commoda HOM05D004820 ORTHO05D005946 6.8e-38 162.5 156 50.0
Cre13.g567750 Chlamydomonas reinhardtii HOM05D004820 ORTHO05D005946 8.3e-36 155.6 328 39.3
CARHR182160 Cardamine hirsuta HOM05D004820 ORTHO05D005946 7.8e-34 149.1 116 67.2
Os03g0701100 Oryza sativa ssp. japonica HOM05D004820 ORTHO05D005946 9.5e-32 142.1 182 46.2
Sopen07g025610 Solanum pennellii HOM05D004820 ORTHO05D005946 1.6e-31 141.4 144 58.3
BraA09t42170Z Brassica rapa HOM05D004820 ORTHO05D005946 8.0e-31 139.0 153 71.2
TAR365G1077 Trochodendron aralioides HOM05D004820 ORTHO05D005946 7.3e-24 115.9 97 62.9
Gohir.D05G222300 Gossypium hirsutum HOM05D004820 ORTHO05D005946 9.2e-19 99.0 60 76.7
Zm00001eb078380 Zea mays HOM05D004820 ORTHO05D005946 1.6e-18 98.2 72 65.3
Gohir.D11G242500 Gossypium hirsutum HOM05D004820 ORTHO05D005946 2.7e-18 97.4 60 75.0
Gorai.009G229700 Gossypium raimondii HOM05D004820 ORTHO05D005946 2.7e-18 97.4 60 75.0
Nitab4.5_0003852g0050 Nicotiana tabacum HOM05D004820 ORTHO05D005946 4.6e-18 96.7 75 68.0
Gorai.011G187700 Gossypium raimondii HOM05D004820 ORTHO05D005946 1.3e-17 95.1 60 73.3
Zm00001eb180190 Zea mays HOM05D004820 ORTHO05D005946 1.5e-16 91.7 68 64.7
Zm00001eb368520 Zea mays HOM05D004820 ORTHO05D005946 3.3e-16 90.5 68 63.2
Zm00001eb017440 Zea mays HOM05D004820 ORTHO05D005946 7.3e-16 89.4 66 63.6
C06p09790 Brassica napus HOM05D004820 ORTHO05D001418 2.8e-15 87.4 46 91.3
BolC6t36051H Brassica oleracea HOM05D004820 ORTHO05D001418 2.8e-15 87.4 46 91.3
Nn4g23784 Nelumbo nucifera HOM05D004820 ORTHO05D005946 2.6e-13 80.9 107 45.8
Nitab4.5_0003327g0040 Nicotiana tabacum HOM05D004820 ORTHO05D005946 4.4e-13 80.1 81 59.3
BcaC08g43579 Brassica carinata HOM05D004820 ORTHO05D001418 7.8e-10 69.3 35 94.3
vmacro14915 Vaccinium macrocarpon HOM05D004820 ORTHO05D005946 1.6e-07 61.6 59 54.2


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