Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p49330 Brassica napus HOM05D007201 ORTHO05D009122 1.1e-191 673.3 403 100.0
A07p40900 Brassica napus HOM05D007201 ORTHO05D009122 3.3e-175 618.6 403 92.6
BraA07t31630Z Brassica rapa HOM05D007201 ORTHO05D009122 9.4e-170 600.5 414 82.6
BcaC08g47362 Brassica carinata HOM05D007201 ORTHO05D009122 4.8e-166 588.2 404 87.4
BolC6t39968H Brassica oleracea HOM05D007201 ORTHO05D009122 2.5e-162 575.9 429 79.3
Sp5g30480 Schrenkiella parvula HOM05D007201 ORTHO05D009122 1.6e-121 440.3 444 65.1
Carub.0002s2218 Capsella rubella HOM05D007201 ORTHO05D009122 9.9e-119 431.0 417 61.4
AL2G35270 Arabidopsis lyrata HOM05D007201 ORTHO05D009122 1.1e-114 417.5 461 59.9
Thhalv10018711m.g Eutrema salsugineum HOM05D007201 ORTHO05D009122 7.6e-111 404.8 409 62.6
AT1G75340 Arabidopsis thaliana HOM05D007201 ORTHO05D009122 4.6e-108 395.6 453 58.1
CARHR068690 Cardamine hirsuta HOM05D007201 ORTHO05D009122 9.3e-93 344.7 438 55.7
Aa31LG4G5550 Aethionema arabicum HOM05D007201 ORTHO05D009122 4.7e-76 289.3 438 45.4
THA.LOC104809224 Tarenaya hassleriana HOM05D007201 ORTHO05D009122 1.1e-72 278.1 424 49.3
Gohir.D04G008200 Gossypium hirsutum HOM05D007201 ORTHO05D009122 4.0e-59 233.0 422 42.2
PSO339G5324 Papaver somniferum HOM05D007201 ORTHO05D009122 1.2e-58 231.5 429 39.4
Gorai.012G009900 Gossypium raimondii HOM05D007201 ORTHO05D009122 4.4e-58 229.6 425 40.7
QL11p005700 Quercus lobata HOM05D007201 ORTHO05D009122 2.8e-57 226.9 432 38.2
COL.COLO4_09000 Corchorus olitorius HOM05D007201 ORTHO05D009122 2.0e-55 220.7 431 41.3
Thecc.09G202300 Theobroma cacao HOM05D007201 ORTHO05D009122 4.5e-55 219.5 429 37.3
Cfa012872 Carpinus fangiana HOM05D007201 ORTHO05D009122 3.8e-54 216.5 439 39.2
Ciclev10008517m.g Citrus clementina HOM05D007201 ORTHO05D009122 3.8e-54 216.5 405 38.3
Manes.02G222200 Manihot esculenta HOM05D007201 ORTHO05D009122 8.5e-54 215.3 424 40.3
CiPaw.15G000100 Carya illinoinensis HOM05D007201 ORTHO05D009122 4.2e-53 213.0 437 37.8
Atru.chr7.298 Acer truncatum HOM05D007201 ORTHO05D009122 1.2e-52 211.5 402 36.8
Eucgr.C00055 Eucalyptus grandis HOM05D007201 ORTHO05D009122 1.6e-52 211.1 424 39.2
TAR626G0209 Trochodendron aralioides HOM05D007201 ORTHO05D009122 6.1e-52 209.1 437 35.5
PGR142G4385 Punica granatum HOM05D007201 ORTHO05D009122 1.0e-51 208.4 414 40.6
ECA234G1264 Erigeron canadensis HOM05D007201 ORTHO05D009122 2.3e-51 207.2 411 39.9
Haze_21242 Corylus avellana HOM05D007201 ORTHO05D009122 3.0e-51 206.8 451 37.9
CSS0027843 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.0e-51 206.5 425 38.8
Phvul.011G018600 Phaseolus vulgaris HOM05D007201 ORTHO05D009122 4.0e-51 206.5 424 36.1
DCAR_019970 Daucus carota HOM05D002293 ORTHO05D005475 6.8e-51 205.7 416 37.5
Rhsim03G0269700 Rhododendron simsii HOM05D007201 ORTHO05D009122 6.8e-51 205.7 427 38.9
MELO3C010035.2 Cucumis melo HOM05D007201 ORTHO05D009122 1.2e-50 204.9 426 35.4
Glyma.11G109000 Glycine max HOM05D007201 ORTHO05D009122 2.6e-50 203.8 423 34.5
arahy.Tifrunner.gnm1.ann1.G7GJBK Arachis hypogaea HOM05D007201 ORTHO05D009122 3.4e-50 203.4 435 44.4
ECA240G0013 Erigeron canadensis HOM05D006383 ORTHO05D007815 5.7e-50 202.6 430 39.1
arahy.Tifrunner.gnm1.ann1.X4HTYC Arachis hypogaea HOM05D007201 ORTHO05D009122 9.8e-50 201.8 437 43.0
CsaV3_1G044360 Cucumis sativus L. HOM05D007201 ORTHO05D009122 9.8e-50 201.8 420 35.7
SHI24431 Sapria himalayana HOM05D007201 ORTHO05D009122 2.2e-49 200.7 265 43.8
Sc10g0006090 Simmondsia chinensis HOM05D007201 ORTHO05D009122 2.8e-49 200.3 434 36.6
Glyma.12G016400 Glycine max HOM05D007201 ORTHO05D009122 8.3e-49 198.7 427 35.8
Potri.006G081100 Populus trichocarpa HOM05D007201 ORTHO05D009122 8.3e-49 198.7 475 37.7
Lju50A20G7 Lonicera japonica HOM05D007201 ORTHO05D009122 1.4e-48 198.0 425 38.1
Lj3g0009807 Lotus japonicus HOM05D007201 ORTHO05D009122 4.1e-48 196.4 434 37.6
Nn8g41282 Nelumbo nucifera HOM05D007201 ORTHO05D009122 9.1e-48 195.3 419 37.5
Sabra06G0061200 Salix brachista HOM05D007201 ORTHO05D009122 1.6e-47 194.5 468 34.2
PGSC0003DMG400002893 Solanum tuberosum HOM05D007201 ORTHO05D009122 2.0e-47 194.1 441 44.9
Aqoxy7G02518 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 2.7e-47 193.7 440 33.9
TPR.G28027 Trifolium pratense HOM05D007201 ORTHO05D009122 1.0e-46 191.8 424 39.6
VMungo1127G0228 Vigna mungo HOM05D007201 ORTHO05D009122 1.7e-46 191.0 440 35.2
Medtr4g078160 Medicago truncatula HOM05D007201 ORTHO05D009122 2.3e-46 190.7 426 39.2
FvH4_4g00131 Fragaria vesca HOM05D007201 ORTHO05D009122 2.9e-46 190.3 415 35.2
HanXRQChr10g0309261 Helianthus annuus HOM05D007201 ORTHO05D009122 3.8e-46 189.9 249 49.0
RcHm_v2.0_Chr4g0384751 Rosa chinensis HOM05D007201 ORTHO05D009122 5.0e-46 189.5 410 33.9
FAN12G0236 Fragaria x ananassa HOM05D007201 ORTHO05D009122 6.5e-46 189.1 412 35.7
Lalb_Chr19g0140031 Lupinus albus HOM05D007201 ORTHO05D009122 8.6e-46 188.7 398 38.2
Actinidia03796 Actinidia chinensis HOM05D007201 ORTHO05D009122 1.5e-45 188.0 435 39.3
GSVIVG01034266001 Vitis vinifera HOM05D007201 ORTHO05D009122 9.5e-45 185.3 411 43.3
MD04G1000600 Malus domestica HOM05D007201 ORTHO05D009122 1.6e-44 184.5 427 35.1
Cc06_g23490 Coffea canephora HOM05D007201 ORTHO05D009122 2.8e-44 183.7 442 36.2
Psat7g169960 Pisum sativum HOM05D007201 ORTHO05D009122 3.6e-44 183.3 435 36.1
Hund22525 Selenicereus undatus HOM05D007201 ORTHO05D009122 3.6e-44 183.3 426 35.2
Solyc12g009390.2 Solanum lycopersicum HOM05D007201 ORTHO05D009122 8.0e-44 182.2 434 44.9
HPP92_017373 Vanilla planifolia HOM05D007201 ORTHO05D009122 6.8e-43 179.1 420 37.9
CANSAT25G2467 Cannabis sativa HOM05D007201 ORTHO05D009122 5.7e-42 176.0 218 44.0
Prupe.1G000600 Prunus persica HOM05D007201 ORTHO05D009122 7.5e-42 175.6 428 34.1
Cpa.g.sc46.114 Carica papaya HOM05D007201 ORTHO05D009122 9.8e-42 175.3 450 35.3
Aqoxy37s001 Aquilegia oxysepala HOM05D007201 ORTHO05D009122 1.7e-41 174.5 241 43.2
SGA_v2.0_scaffold21G09583 Striga asiatica HOM05D007201 ORTHO05D009122 1.7e-41 174.5 451 40.1
Lsat_1_v5_gn_5_80700 Lactuca sativa HOM05D007201 ORTHO05D009122 3.7e-41 173.3 420 35.0
Sopen12g004380 Solanum pennellii HOM05D007201 ORTHO05D009122 1.4e-40 171.4 425 45.4
unitig_8.g3542 Utricularia gibba HOM05D007201 ORTHO05D009122 3.1e-40 170.2 402 35.8
SEGI_05170 Sequoiadendron giganteum HOM05D007201 ORTHO05D009122 7.0e-40 169.1 428 33.6
vmacro22702 Vaccinium macrocarpon HOM05D007201 ORTHO05D009122 7.8e-39 165.6 504 31.0
CAN.G1591.3 Capsicum annuum HOM05D007201 ORTHO05D009122 1.7e-38 164.5 211 47.4
EL10Ac2g03602 Beta vulgaris HOM05D007201 ORTHO05D009122 2.9e-38 163.7 458 36.9
ATR0626G320 Amborella trichopoda HOM05D007201 ORTHO05D009122 3.8e-38 163.3 420 32.9
FAN12G1512 Fragaria x ananassa HOM05D007201 ORTHO05D009122 3.8e-38 163.3 191 46.1
Nitab4.5_0000073g0490 Nicotiana tabacum HOM05D007201 ORTHO05D009122 5.0e-38 162.9 204 47.1
CSS0037159 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.3e-37 159.8 337 34.7
Zm00001eb227240 Zea mays HOM05D007201 ORTHO05D009122 4.3e-37 159.8 431 32.7
Peaxi162Scf00047g02450 Petunia axillaris HOM05D007201 ORTHO05D009122 5.6e-37 159.5 414 38.2
CDE04G0352 Ceratophyllum demersum HOM05D007201 ORTHO05D009122 9.5e-37 158.7 382 34.0
Os06g0704300 Oryza sativa ssp. japonica HOM05D007201 ORTHO05D009122 2.8e-36 157.1 430 35.1
AUR62027959 Chenopodium quinoa HOM05D007201 ORTHO05D009122 8.0e-36 155.6 234 44.0
CSS0027553 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 7.5e-34 149.1 147 54.4
Pp3c7_12210 Physcomitrium patens HOM05D007201 ORTHO05D009122 4.9e-33 146.4 436 31.7
Nitab4.5_0004827g0030 Nicotiana tabacum HOM05D007201 ORTHO05D009122 1.2e-28 131.7 352 43.8
Mapoly0005s0044 Marchantia polymorpha HOM05D007201 ORTHO05D009122 6.2e-28 129.4 457 27.8
Duzib168G1263 Durio zibethinus HOM05D007201 ORTHO05D009122 2.3e-27 127.5 407 37.1
FAN22G0406 Fragaria x ananassa HOM05D007201 ORTHO05D009122 1.2e-26 125.2 413 31.2
Dinv26498 Davidia involucrata HOM05D007201 ORTHO05D009122 2.6e-26 124.0 433 31.4
FAN17G0247 Fragaria x ananassa HOM05D007201 ORTHO05D009122 9.2e-24 115.5 89 56.2
AagrBONN_evm.TU.Sc2ySwM_117.2509 Anthoceros agrestis HOM05D007201 ORTHO05D009122 4.3e-21 106.7 95 50.5
Oeu000954.1 Olea europaea HOM05D007201 ORTHO05D009122 5.8e-18 96.3 273 30.8
Migut.L01609 Erythranthe guttata HOM05D007201 ORTHO05D009122 2.2e-17 94.4 409 31.3
CBR_g15955 Chara braunii HOM05D007201 ORTHO05D009122 3.2e-16 90.5 235 35.7
Gohir.A05G407400 Gossypium hirsutum HOM05D007201 ORTHO05D009122 4.7e-12 76.6 301 34.2
CSS0006520 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.9e-09 66.6 61 50.8
CSS0048863 Camellia sinensis var. sinensis HOM05D007201 ORTHO05D009122 4.9e-09 66.6 61 50.8
ClCG03G010480 Citrullus lanatus HOM05D007201 ORTHO05D009122 3.0e-06 57.4 33 72.7
arahy.Tifrunner.gnm1.ann1.IV261E Arachis hypogaea HOM05D000013 ORTHO05D000506 5.1e-06 56.6 88 38.6


User provided reference genes

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