Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p07570 Brassica napus HOM05D001366 ORTHO05D005449 1.5e-36 155.6 77 100.0
BolC6t35845H Brassica oleracea HOM05D001366 ORTHO05D005449 1.5e-36 155.6 77 100.0
BcaNung05637 Brassica carinata HOM05D001366 ORTHO05D005449 2.6e-20 101.7 107 59.8
A03p55290 Brassica napus HOM05D001366 ORTHO05D005449 2.6e-20 101.7 107 59.8
C07p53590 Brassica napus HOM05D001366 ORTHO05D005449 2.6e-20 101.7 107 59.8
BraA03t14588Z Brassica rapa HOM05D001366 ORTHO05D005449 2.6e-20 101.7 107 59.8
HanXRQChr10g0277741 Helianthus annuus HOM05D001366 ORTHO05D005449 3.4e-20 101.3 107 59.8
CANSAT25G2801 Cannabis sativa HOM05D001366 ORTHO05D005449 4.5e-20 100.9 107 59.8
Lsat_1_v5_gn_6_107360 Lactuca sativa HOM05D001366 ORTHO05D005449 4.5e-20 100.9 106 59.4
Lalb_Chr08g0242611 Lupinus albus HOM05D001366 ORTHO05D005449 4.5e-20 100.9 107 58.9
Lalb_Chr11g0064851 Lupinus albus HOM05D001366 ORTHO05D005449 4.5e-20 100.9 107 58.9
Lalb_Chr23g0269931 Lupinus albus HOM05D001366 ORTHO05D005449 4.5e-20 100.9 107 58.9
Ah.01g003970 Amaranthus hybridus HOM05D001366 ORTHO05D005449 7.6e-20 100.1 107 58.9
BcaC06g32884 Brassica carinata HOM05D001366 ORTHO05D005449 7.6e-20 100.1 107 58.9
BolC7t45851H Brassica oleracea HOM05D001366 ORTHO05D005449 7.6e-20 100.1 107 58.9
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla HOM05D001366 ORTHO05D005449 1.0e-19 99.8 107 58.9
GSVIVG01009213001 Vitis vinifera HOM05D001366 ORTHO05D005449 1.0e-19 99.8 107 58.9
Actinidia29656 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.3e-19 99.4 107 58.9
EL10Ac8g20405 Beta vulgaris HOM05D001366 ORTHO05D005449 1.3e-19 99.4 107 57.9
MBI19_g32700_MAGBIO Magnolia biondii HOM05D001366 ORTHO05D005449 1.3e-19 99.4 107 58.9
Aqoxy6G00666 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 1.7e-19 99.0 107 58.9
EL10Ac9g20840 Beta vulgaris HOM05D001366 ORTHO05D005449 1.7e-19 99.0 107 57.9
PSO013G0324 Papaver somniferum HOM05D001366 ORTHO05D005449 1.7e-19 99.0 107 57.9
Aa31LG4G9540 Aethionema arabicum HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
AL7G28780 Arabidopsis lyrata HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
AT4G24440 Arabidopsis thaliana HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
A08p21460 Brassica napus HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
BolC8t48576H Brassica oleracea HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
BraA08t34095Z Brassica rapa HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
Carub.0007s1663 Capsella rubella HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
Thhalv10026637m.g Eutrema salsugineum HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
PSO832G3977 Papaver somniferum HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.0
Sp7g22400 Schrenkiella parvula HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
THA.LOC104815469 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 57.9
TAR625G0060 Trochodendron aralioides HOM05D001366 ORTHO05D005449 2.2e-19 98.6 107 58.9
BcaC09g50868 Brassica carinata HOM05D001366 ORTHO05D003220 2.9e-19 98.2 106 57.5
C01p19760 Brassica napus HOM05D001366 ORTHO05D003220 2.9e-19 98.2 106 57.5
BolC1t01904H Brassica oleracea HOM05D001366 ORTHO05D003220 2.9e-19 98.2 106 57.5
Manes.18G057000 Manihot esculenta HOM05D001366 ORTHO05D005449 2.9e-19 98.2 107 57.9
PGR042G3224 Punica granatum HOM05D001366 ORTHO05D005449 2.9e-19 98.2 107 57.9
THA.LOC104799853 Tarenaya hassleriana HOM05D001366 ORTHO05D005449 2.9e-19 98.2 107 57.9
ATR0691G175 Amborella trichopoda HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
CSS0031876 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
ClCG11G014700 Citrullus lanatus HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.0
Glyma.02G216100 Glycine max HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
LjContig00408g0006754 Lotus japonicus HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
Nitab4.5_0000885g0060 Nicotiana tabacum HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
Phvul.008G183300 Phaseolus vulgaris HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
Sed0016266 Sechium edule HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.0
PGSC0003DMG400002052 Solanum tuberosum HOM05D001366 ORTHO05D005449 3.8e-19 97.8 107 57.9
Aqoxy2G03242 Aquilegia oxysepala HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.9
CAN.G1104.8 Capsicum annuum HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.9
CARHR231830 Cardamine hirsuta HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
CiPaw.08G057200 Carya illinoinensis HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
Cc10_g08370 Coffea canephora HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.9
CsaV3_2G033370 Cucumis sativus L. HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
Gohir.D05G266700 Gossypium hirsutum HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
PSO700G0345 Papaver somniferum HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
PSO761G0276 Papaver somniferum HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.0
Solyc12g088030.2 Solanum lycopersicum HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.9
Sopen12g030060 Solanum pennellii HOM05D001366 ORTHO05D005449 5.0e-19 97.4 107 57.9
Eucgr.F00436 Eucalyptus grandis HOM05D001366 ORTHO05D005449 6.5e-19 97.1 107 57.9
Nn1g05642 Nelumbo nucifera HOM05D001366 ORTHO05D005449 6.5e-19 97.1 107 57.9
Rhsim07G0213700 Rhododendron simsii HOM05D001366 ORTHO05D005449 6.5e-19 97.1 107 57.0
Gorai.009G278800 Gossypium raimondii HOM05D001366 ORTHO05D005449 8.5e-19 96.7 107 57.0
Hund07854 Selenicereus undatus HOM05D001366 ORTHO05D005449 8.5e-19 96.7 107 57.0
A01p15810 Brassica napus HOM05D001366 ORTHO05D003220 1.1e-18 96.3 105 57.1
BraA01t01516Z Brassica rapa HOM05D001366 ORTHO05D003220 1.1e-18 96.3 105 57.1
CiPaw.07G162800 Carya illinoinensis HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.0
FvH4_5g34180 Fragaria vesca HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.0
FAN18G2982 Fragaria x ananassa HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.0
Medtr7g005540 Medicago truncatula HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.0
Nitab4.5_0000354g0080 Nicotiana tabacum HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.9
RcHm_v2.0_Chr7g0233761 Rosa chinensis HOM05D001366 ORTHO05D005449 1.1e-18 96.3 107 57.0
CSS0026904 Camellia sinensis var. sinensis HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 57.0
Cpa.g.sc21.43 Carica papaya HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 57.0
Haze_22489 Corylus avellana HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 56.1
DCAR_006444 Daucus carota HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 57.0
Duzib041G0019 Durio zibethinus HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 56.1
Peaxi162Scf00160g00913 Petunia axillaris HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 57.0
Psat2g064960 Pisum sativum HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 57.0
Sed0015347 Sechium edule HOM05D001366 ORTHO05D005449 1.4e-18 95.9 107 56.1
MELO3C008106.2 Cucumis melo HOM05D001366 ORTHO05D005449 1.9e-18 95.5 107 56.1
Oeu040884.1 Olea europaea HOM05D001366 ORTHO05D005449 1.9e-18 95.5 107 56.1
Prupe.1G536300 Prunus persica HOM05D001366 ORTHO05D005449 1.9e-18 95.5 107 57.0
COL.COLO4_35286 Corchorus olitorius HOM05D001366 ORTHO05D005449 3.2e-18 94.7 107 56.1
Gohir.A05G264200 Gossypium hirsutum HOM05D001366 ORTHO05D005449 3.2e-18 94.7 107 56.1
Potri.005G151700 Populus trichocarpa HOM05D001366 ORTHO05D005449 3.2e-18 94.7 107 56.1
TWI09G0135 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 3.2e-18 94.7 107 56.1
TWI73G1055 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 3.2e-18 94.7 112 55.4
Atru.chr13.973 Acer truncatum HOM05D001366 ORTHO05D005449 4.2e-18 94.4 107 56.1
Glyma.14G183100 Glycine max HOM05D001366 ORTHO05D005449 4.2e-18 94.4 107 57.0
HanXRQChr03g0063191 Helianthus annuus HOM05D001366 ORTHO05D005449 4.2e-18 94.4 107 56.1
Ciclev10002917m.g Citrus clementina HOM05D001366 ORTHO05D005449 5.5e-18 94.0 107 56.1
ECA240G3991 Erigeron canadensis HOM05D001366 ORTHO05D005449 5.5e-18 94.0 107 55.1
Thecc.08G074000 Theobroma cacao HOM05D001366 ORTHO05D005449 5.5e-18 94.0 107 56.1
Migut.N01147 Erythranthe guttata HOM05D001366 ORTHO05D005449 7.2e-18 93.6 107 55.1
FAN04G2369 Fragaria x ananassa HOM05D001366 ORTHO05D005449 7.2e-18 93.6 107 55.1
SalBow3G1925 Salvia bowleyana HOM05D001366 ORTHO05D005449 7.2e-18 93.6 107 55.1
Gohir.D05G220900 Gossypium hirsutum HOM05D001366 ORTHO05D005449 9.3e-18 93.2 107 56.1
Gorai.009G228000 Gossypium raimondii HOM05D001366 ORTHO05D005449 9.3e-18 93.2 107 56.1
Os05g0107700 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 9.3e-18 93.2 107 55.1
Zm00001eb356100 Zea mays HOM05D001366 ORTHO05D005449 9.3e-18 93.2 107 56.1
Atru.chr11.619 Acer truncatum HOM05D001366 ORTHO05D005449 1.2e-17 92.8 107 55.1
MSTRG.5323 Avicennia marina HOM05D001366 ORTHO05D005449 1.2e-17 92.8 107 54.2
MSTRG.27758 Avicennia marina HOM05D001366 ORTHO05D005449 1.6e-17 92.4 107 54.2
SalBow6G3832 Salvia bowleyana HOM05D001366 ORTHO05D005449 1.6e-17 92.4 107 54.2
SalBow6G5818 Salvia bowleyana HOM05D001366 ORTHO05D005449 1.6e-17 92.4 107 54.2
CsaV3_2G033350 Cucumis sativus L. HOM05D001366 ORTHO05D005449 2.1e-17 92.0 107 55.1
Os01g0970500 Oryza sativa ssp. japonica HOM05D001366 ORTHO05D005449 2.1e-17 92.0 105 55.2
SGA_v2.0_scaffold337G49194 Striga asiatica HOM05D001366 ORTHO05D005449 2.7e-17 91.7 107 54.2
Duzib116G0949 Durio zibethinus HOM05D001366 ORTHO05D005449 3.6e-17 91.3 105 54.3
TPR.G15622 Trifolium pratense HOM05D001366 ORTHO05D005449 3.6e-17 91.3 105 55.2
unitig_22.g6842 Utricularia gibba HOM05D001366 ORTHO05D005449 1.0e-16 89.7 107 53.3
TWI56G0439 Tripterygium wilfordii HOM05D001366 ORTHO05D005449 1.3e-16 89.4 112 50.9
HPP92_010288 Vanilla planifolia HOM05D001366 ORTHO05D005449 1.3e-16 89.4 106 52.8
Rhsim02G0071900 Rhododendron simsii HOM05D001366 ORTHO05D005449 1.8e-16 89.0 123 51.2
MSTRG.16686 Avicennia marina HOM05D001366 ORTHO05D005449 2.3e-16 88.6 106 50.9
SGA_v2.0_scaffold219G42523 Striga asiatica HOM05D001366 ORTHO05D005449 2.3e-16 88.6 105 53.3
TPR.G38776 Trifolium pratense HOM05D001366 ORTHO05D005449 2.3e-16 88.6 107 53.3
Medtr5g066740 Medicago truncatula HOM05D001366 ORTHO05D005449 6.7e-16 87.0 107 50.5
Zm00001eb139900 Zea mays HOM05D001366 ORTHO05D005449 1.5e-15 85.9 109 51.4
Gohir.A05G216500 Gossypium hirsutum HOM05D001366 ORTHO05D005449 2.5e-15 85.1 117 51.3
Sabra05G0119200 Salix brachista HOM05D001366 ORTHO05D005449 9.7e-15 83.2 133 43.6
Actinidia19254 Actinidia chinensis HOM05D001366 ORTHO05D005449 1.3e-14 82.8 107 48.6
SHI29728 Sapria himalayana HOM05D001366 ORTHO05D005449 4.8e-14 80.9 102 48.0
ECA246G1742 Erigeron canadensis HOM05D001366 ORTHO05D005449 6.3e-14 80.5 71 66.2
Psat0s2399g0160 Pisum sativum HOM05D001366 ORTHO05D005449 4.1e-13 77.8 104 47.1
Lsat_1_v5_gn_7_43741 Lactuca sativa HOM05D001366 ORTHO05D005449 9.1e-13 76.6 71 62.0
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis HOM05D001366 ORTHO05D005449 1.5e-12 75.9 108 45.4
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis HOM05D001366 ORTHO05D005449 2.6e-12 75.1 107 40.2
AUR62017035 Chenopodium quinoa HOM05D001366 ORTHO05D005449 3.4e-12 74.7 94 53.2
TAR381G0322 Trochodendron aralioides HOM05D001366 ORTHO05D005449 4.5e-12 74.3 107 46.7
Oeu038169.3 Olea europaea HOM05D001366 ORTHO05D005449 1.0e-11 73.2 165 37.6
MD08G1203900 Malus domestica HOM05D001366 ORTHO05D005449 1.7e-11 72.4 94 52.1
Mapoly0012s0108 Marchantia polymorpha HOM05D001366 ORTHO05D005449 2.5e-10 68.6 107 40.2
Pp3c15_13540 Physcomitrium patens HOM05D001366 ORTHO05D005449 2.5e-10 68.6 107 41.1
Pp3c9_10830 Physcomitrium patens HOM05D001366 ORTHO05D005449 9.4e-10 66.6 107 40.2
SMO169G0007 Selaginella moellendorffii HOM05D001366 ORTHO05D005449 9.4e-10 66.6 106 40.6
BcaC08g43388 Brassica carinata HOM05D001366 ORTHO05D005449 1.6e-09 65.9 60 61.7
Lsat_1_v5_gn_4_60280 Lactuca sativa HOM05D001366 ORTHO05D005449 1.8e-08 62.4 66 59.1
Actinidia19617 Actinidia chinensis HOM05D001366 ORTHO05D005449 2.6e-07 58.5 71 53.5
AUR62014838 Chenopodium quinoa HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
Ca_08744_v3 Cicer arietinum L. HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
Dinv42590 Davidia involucrata HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
QL09p018667 Quercus lobata HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
vmacro04625 Vaccinium macrocarpon HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
VMungo0647G1399 Vigna mungo HOM05D001366 ORTHO05D005449 2.6e-07 58.5 43 74.4
Migut.B00439 Erythranthe guttata HOM05D001366 ORTHO05D005449 1.7e-06 55.8 107 39.3
HanXRQChr05g0143271 Helianthus annuus HOM05D001366 ORTHO05D005449 3.7e-06 54.7 43 69.8
RcHm_v2.0_Chr5g0012851 Rosa chinensis HOM05D001366 ORTHO05D005449 3.7e-06 54.7 107 39.3


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