Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 6.9e-97 357.5 200 100.0
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 3.8e-95 351.7 200 98.5
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 2.3e-92 342.4 200 97.0
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 6.7e-92 340.9 201 97.0
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 3.0e-84 315.5 200 89.5
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.3e-83 312.0 200 89.5
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.4e-76 290.0 201 86.6
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.4e-73 279.3 200 83.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.0e-68 263.8 201 80.1
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 7.4e-67 257.7 209 76.6
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 2.9e-63 245.7 216 72.7
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 5.7e-51 204.9 147 82.3
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 7.5e-43 177.9 205 58.0
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 6.3e-42 174.9 205 57.6
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 3.8e-39 165.6 209 51.2
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 1.1e-38 164.1 209 55.5
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 1.5e-38 163.7 211 53.1
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 2.5e-38 162.9 215 52.6
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.5e-38 162.9 213 53.5
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.5e-38 162.9 209 55.0
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 7.3e-38 161.4 206 52.9
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 1.2e-37 160.6 215 52.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.8e-37 159.5 209 54.1
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.8e-37 159.5 209 54.1
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 6.1e-37 158.3 211 55.9
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 1.0e-36 157.5 218 49.1
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 1.4e-36 157.1 209 54.5
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 4.0e-36 155.6 209 52.6
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 4.0e-36 155.6 209 52.6
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 1.2e-35 154.1 207 53.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 1.2e-35 154.1 206 54.4
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.4e-35 152.5 217 50.2
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 3.4e-35 152.5 207 52.2
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 3.4e-35 152.5 217 51.2
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 4.4e-35 152.1 205 53.2
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 4.4e-35 152.1 220 52.7
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 7.5e-35 151.4 217 51.2
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 7.5e-35 151.4 211 54.0
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 7.5e-35 151.4 210 51.4
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 7.5e-35 151.4 206 53.9
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 9.8e-35 151.0 218 50.5
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 9.8e-35 151.0 217 50.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.3e-34 150.6 209 51.2
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.7e-34 150.2 213 52.6
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 1.7e-34 150.2 209 50.2
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 2.2e-34 149.8 205 53.7
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 2.2e-34 149.8 207 51.7
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 2.2e-34 149.8 217 50.2
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 2.9e-34 149.4 205 53.7
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.7e-34 149.1 201 55.7
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 3.7e-34 149.1 205 53.7
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.7e-34 149.1 208 53.8
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.4e-33 147.1 209 50.7
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.4e-33 147.1 211 47.4
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.2e-33 146.0 254 43.7
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 9.2e-33 144.4 214 52.3
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-32 143.3 208 49.0
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 2.0e-32 143.3 208 49.0
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 3.5e-32 142.5 212 45.3
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 7.8e-32 141.4 208 51.0
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 2.3e-31 139.8 209 50.2
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 2.3e-31 139.8 249 42.2
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 3.0e-31 139.4 204 51.0
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 3.0e-31 139.4 212 44.8
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 3.9e-31 139.0 199 51.3
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.9e-31 139.0 217 47.9
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 3.9e-31 139.0 208 45.2
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 8.6e-31 137.9 209 51.2
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.1e-30 137.5 208 52.4
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 4.3e-30 135.6 208 51.9
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 5.6e-30 135.2 207 51.7
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 9.5e-30 134.4 208 51.0
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 9.5e-30 134.4 210 48.6
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.7e-29 132.1 240 46.2
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.7e-29 132.1 208 49.0
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 6.2e-29 131.7 204 50.0
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 6.2e-29 131.7 209 50.7
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.4e-28 130.6 216 45.8
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.4e-28 130.6 199 49.7
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 3.1e-28 129.4 257 41.6
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 4.0e-28 129.0 221 48.4
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.6e-27 126.3 152 55.9
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 1.3e-26 124.0 212 46.2
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 2.2e-26 123.2 208 47.1
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.2e-26 123.2 205 47.8
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.9e-26 122.9 205 45.9
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.7e-26 122.5 232 44.4
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 4.9e-26 122.1 208 45.2
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 6.4e-26 121.7 204 48.5
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.1e-25 120.9 207 48.3
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.6e-24 117.1 209 42.6
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.7e-24 116.3 208 46.2
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 4.6e-24 115.5 205 47.8
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 1.7e-23 113.6 212 44.8
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 2.5e-22 109.8 154 51.3
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 4.3e-22 109.0 196 48.0
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.5e-22 107.8 183 45.9
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.2e-19 100.9 183 42.6
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 6.4e-18 95.1 216 38.9
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 9.2e-17 91.3 195 40.5
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 2.5e-14 83.2 201 40.8
C03p74890 Brassica napus HOM05D013368 ORTHO05D031982 2.1e-13 80.1 56 67.9
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.4e-12 77.4 254 35.0
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.8e-12 77.0 70 67.1
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 73.9 176 37.5
BcaNung00771 Brassica carinata HOM05D013368 ORTHO05D031982 3.4e-11 72.8 68 57.4
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.4e-11 72.8 146 39.7
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 3.4e-11 72.8 146 39.7
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.3e-10 70.9 193 34.2
BolC7t43482H Brassica oleracea HOM05D013368 ORTHO05D031982 9.2e-09 64.7 68 58.8
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 1.6e-08 63.9 240 31.7
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 2.3e-07 60.1 249 34.1
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 3.0e-07 59.7 228 32.0
BcaC01g03242 Brassica carinata HOM05D013368 ORTHO05D091529 5.6e-06 55.5 50 58.0


User provided reference genes

Program Settings