Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 2.6e-192 675.2 349 100.0
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 4.0e-185 651.4 345 97.7
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.0e-184 649.0 345 97.4
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 2.4e-177 625.5 351 94.0
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 2.4e-177 625.5 351 94.0
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.3e-154 550.1 365 82.5
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 1.4e-145 520.0 372 76.6
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 8.5e-143 510.8 362 78.5
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.1e-142 510.4 357 78.2
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 9.4e-142 507.3 358 77.4
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 2.6e-139 499.2 360 78.3
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 3.1e-137 492.3 370 73.8
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 3.8e-127 458.8 378 69.0
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 3.5e-112 409.1 364 62.4
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.1e-100 369.4 375 56.8
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 8.9e-100 367.9 350 58.9
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 7.5e-99 364.8 365 57.3
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 6.0e-96 355.1 372 57.3
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.3e-95 353.2 374 54.8
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 3.0e-95 352.8 369 54.7
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 3.6e-93 345.9 360 56.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 8.1e-93 344.7 356 55.3
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 8.9e-92 341.3 379 51.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 8.9e-92 341.3 358 55.0
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.2e-89 332.8 385 50.4
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 3.2e-89 332.8 366 53.8
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.7e-87 327.0 377 50.4
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.7e-87 327.0 352 52.6
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.1e-87 325.5 384 51.8
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.1e-86 324.3 357 52.1
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 2.5e-86 323.2 369 51.2
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.5e-86 323.2 361 53.2
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.3e-86 322.8 345 51.0
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 3.3e-86 322.8 384 49.0
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 7.3e-86 321.6 341 52.8
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 9.6e-86 321.2 368 50.8
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 9.6e-86 321.2 370 50.0
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.2e-85 320.9 371 50.7
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.6e-85 319.3 373 51.7
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 4.7e-85 318.9 380 51.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 6.2e-85 318.5 360 52.2
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 6.2e-85 318.5 373 50.7
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.2e-85 318.5 365 50.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 8.1e-85 318.2 359 52.1
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 8.1e-85 318.2 375 49.6
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 8.1e-85 318.2 352 51.4
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.4e-84 317.4 385 50.4
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.4e-84 317.4 355 50.7
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.4e-84 317.4 338 56.5
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 1.4e-84 317.4 373 48.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 5.2e-84 315.5 371 50.1
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 5.2e-84 315.5 370 49.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 6.9e-84 315.1 370 48.9
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 9.0e-84 314.7 335 52.5
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.2e-83 314.3 386 50.0
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.5e-83 313.9 366 51.6
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 1.5e-83 313.9 372 49.2
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 2.0e-83 313.5 369 48.8
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.0e-83 313.5 384 48.4
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 2.0e-83 313.5 369 49.9
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 3.4e-83 312.8 369 49.9
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 5.8e-83 312.0 352 53.1
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 5.8e-83 312.0 351 51.3
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.3e-82 310.8 367 48.2
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.2e-82 310.1 356 50.6
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.9e-82 309.7 349 52.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 8.4e-82 308.1 358 49.7
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 2.4e-81 306.6 355 49.9
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 4.2e-81 305.8 371 48.5
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 4.2e-81 305.8 381 49.3
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 9.3e-81 304.7 326 54.0
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 7.8e-80 301.6 353 52.4
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.1e-78 297.7 355 47.6
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 1.1e-78 297.7 306 54.2
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 2.5e-78 296.6 371 45.6
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 2.5e-78 296.6 346 50.0
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.3e-78 295.8 380 45.3
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.6e-78 295.4 380 46.1
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 1.2e-75 287.7 339 51.0
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 4.2e-73 279.3 443 41.3
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 9.3e-73 278.1 320 49.7
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 4.6e-72 275.8 359 49.3
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 6.9e-68 261.9 333 44.7
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 9.9e-67 258.1 352 48.3
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 3.0e-63 246.5 290 50.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 3.9e-63 246.1 341 45.2
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 5.1e-63 245.7 336 43.2
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 2.5e-62 243.4 278 48.6
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 4.3e-62 242.7 363 43.0
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.3e-58 231.1 272 47.8
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.5e-54 216.9 534 32.2
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.4e-51 206.5 316 38.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 3.8e-50 203.0 233 49.8
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 7.2e-49 198.7 174 60.3
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 2.5e-46 190.3 161 59.6
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 7.4e-46 188.7 110 81.8
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.7e-45 186.4 354 36.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 8.8e-39 165.2 198 53.0
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.0e-35 154.1 201 48.8
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 2.6e-35 153.7 363 33.6
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 8.5e-34 148.7 202 43.1
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.9e-33 147.5 203 45.3
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 1.2e-32 144.8 226 42.5
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.1e-30 138.3 207 42.0
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.6e-30 137.1 97 59.8
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 3.3e-22 110.2 84 66.7
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 1.7e-21 107.8 249 34.9
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.2e-18 97.4 114 47.4
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 3.8e-18 96.7 142 43.0
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.4e-07 61.6 126 31.7


User provided reference genes

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