Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C02p13910 Brassica napus HOM05D004601 ORTHO05D041326 1.2e-288 995.7 494 100.0
BolC2t07510H Brassica oleracea HOM05D004601 ORTHO05D041326 5.7e-286 986.9 494 99.4
AL8G33090 Arabidopsis lyrata HOM05D004601 ORTHO05D005806 4.3e-31 140.2 173 47.4
Thhalv10012474m.g Eutrema salsugineum HOM05D004601 ORTHO05D005806 4.3e-31 140.2 173 46.2
AT5G57160 Arabidopsis thaliana HOM05D004601 ORTHO05D005806 5.6e-31 139.8 173 46.8
THA.LOC104817773 Tarenaya hassleriana HOM05D004601 ORTHO05D005806 1.6e-30 138.3 173 44.5
Aa31LG3G13060 Aethionema arabicum HOM05D004601 ORTHO05D005806 2.8e-30 137.5 173 46.8
A10p14520 Brassica napus HOM05D004601 ORTHO05D005806 4.7e-30 136.7 173 45.7
BcaC04g19995 Brassica carinata HOM05D004601 ORTHO05D005806 8.1e-30 136.0 173 45.7
C09p48970 Brassica napus HOM05D004601 ORTHO05D005806 8.1e-30 136.0 173 45.7
BraA10t43541Z Brassica rapa HOM05D004601 ORTHO05D005806 8.1e-30 136.0 173 45.7
Sp6g18890 Schrenkiella parvula HOM05D004601 ORTHO05D005806 1.4e-29 135.2 173 45.1
BolC9t57749H Brassica oleracea HOM05D004601 ORTHO05D005806 6.8e-29 132.9 173 45.1
MD16G1247900 Malus domestica HOM05D004601 ORTHO05D005806 2.0e-28 131.3 170 42.9
Prupe.1G074600 Prunus persica HOM05D004601 ORTHO05D005806 2.0e-28 131.3 172 43.0
Gohir.D13G212700 Gossypium hirsutum HOM05D004601 ORTHO05D005806 7.5e-28 129.4 171 42.1
Gorai.013G243100 Gossypium raimondii HOM05D004601 ORTHO05D005806 7.5e-28 129.4 171 42.1
Manes.14G159112 Manihot esculenta HOM05D004601 ORTHO05D005806 4.9e-27 126.7 269 34.9
Thecc.09G186600 Theobroma cacao HOM05D004601 ORTHO05D005806 4.9e-27 126.7 172 40.7
COL.COLO4_06398 Corchorus olitorius HOM05D004601 ORTHO05D005806 6.4e-27 126.3 233 37.3
Cpa.g.sc95.10 Carica papaya HOM05D004601 ORTHO05D005806 8.3e-27 125.9 233 37.8
Gohir.A13G208300 Gossypium hirsutum HOM05D004601 ORTHO05D005806 8.3e-27 125.9 172 41.9
FAN12G1367 Fragaria x ananassa HOM05D004601 ORTHO05D005806 1.1e-26 125.6 229 37.6
Lj7A622G14 Lonicera japonica HOM05D004601 ORTHO05D005806 1.9e-26 124.8 233 37.8
ClCG11G011730 Citrullus lanatus HOM05D004601 ORTHO05D005806 2.4e-26 124.4 172 40.7
Duzib150G1331 Durio zibethinus HOM05D004601 ORTHO05D005806 2.4e-26 124.4 170 40.6
FAN17G2239 Fragaria x ananassa HOM05D004601 ORTHO05D005806 2.4e-26 124.4 215 37.7
HanXRQChr05g0141031 Helianthus annuus HOM05D004601 ORTHO05D005806 4.1e-26 123.6 172 40.1
PGR142G2375 Punica granatum HOM05D004601 ORTHO05D005806 4.1e-26 123.6 219 37.0
PGR142G4125 Punica granatum HOM05D004601 ORTHO05D005806 4.1e-26 123.6 219 37.0
Ciclev10007283m.g Citrus clementina HOM05D004601 ORTHO05D005806 5.4e-26 123.2 168 42.9
Lsat_1_v5_gn_8_69120 Lactuca sativa HOM05D004601 ORTHO05D005806 5.4e-26 123.2 172 40.1
TWI63G1718 Tripterygium wilfordii HOM05D004601 ORTHO05D005806 5.4e-26 123.2 270 34.1
RcHm_v2.0_Chr4g0399311 Rosa chinensis HOM05D004601 ORTHO05D005806 7.1e-26 122.9 231 35.9
CANSAT11G0507 Cannabis sativa HOM05D004601 ORTHO05D005806 9.2e-26 122.5 231 35.5
Rhsim03G0267200 Rhododendron simsii HOM05D004601 ORTHO05D005806 2.1e-25 121.3 220 35.9
Sed0026596 Sechium edule HOM05D004601 ORTHO05D005806 2.1e-25 121.3 172 41.3
Cc06_g20790 Coffea canephora HOM05D004601 ORTHO05D005806 3.5e-25 120.6 215 38.1
Nn8g40736 Nelumbo nucifera HOM05D004601 ORTHO05D005806 3.5e-25 120.6 267 31.8
Dinv25455 Davidia involucrata HOM05D004601 ORTHO05D005806 6.0e-25 119.8 219 37.4
Potri.018G141900 Populus trichocarpa HOM05D004601 ORTHO05D005806 1.0e-24 119.0 168 40.5
Cfa013456 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.3e-24 118.6 230 36.1
Lalb_Chr08g0231931 Lupinus albus HOM05D004601 ORTHO05D005806 1.3e-24 118.6 170 40.0
Migut.J00793 Erythranthe guttata HOM05D004601 ORTHO05D005806 1.7e-24 118.2 217 35.9
DCAR_020147 Daucus carota HOM05D004601 ORTHO05D005806 2.3e-24 117.9 167 39.5
Psat1g144440 Pisum sativum HOM05D004601 ORTHO05D005806 2.3e-24 117.9 167 38.9
CSS0021444 Camellia sinensis var. sinensis HOM05D004601 ORTHO05D005806 3.0e-24 117.5 169 38.5
Ca_02111_v3 Cicer arietinum L. HOM05D004601 ORTHO05D005806 3.9e-24 117.1 172 40.1
Hma1.2p1_0235F.1_g098680 Hydrangea macrophylla HOM05D004601 ORTHO05D005806 6.6e-24 116.3 214 35.5
Sc16g0011160 Simmondsia chinensis HOM05D004601 ORTHO05D005806 6.6e-24 116.3 221 36.2
GSVIVG01029314001 Vitis vinifera HOM05D004601 ORTHO05D005806 6.6e-24 116.3 233 35.2
MSTRG.5939 Avicennia marina HOM05D004601 ORTHO05D005806 1.1e-23 115.5 219 36.5
Lj6g0004756 Lotus japonicus HOM05D004601 ORTHO05D005806 1.1e-23 115.5 169 39.6
Sabra18G0116000 Salix brachista HOM05D004601 ORTHO05D005806 1.1e-23 115.5 171 38.6
Atru.chr7.956 Acer truncatum HOM05D004601 ORTHO05D005806 1.5e-23 115.2 168 39.9
CiPaw.08G032200 Carya illinoinensis HOM05D004601 ORTHO05D005806 3.3e-23 114.0 147 41.5
PSO170G3696 Papaver somniferum HOM05D004601 ORTHO05D005806 3.3e-23 114.0 266 33.1
VMungo1309G1314 Vigna mungo HOM05D004601 ORTHO05D005806 3.3e-23 114.0 168 39.3
Solyc07g017990.3 Solanum lycopersicum HOM05D004601 ORTHO05D005806 4.3e-23 113.6 218 36.7
Sopen07g006920 Solanum pennellii HOM05D004601 ORTHO05D005806 4.3e-23 113.6 218 36.7
Aqoxy7G02847 Aquilegia oxysepala HOM05D004601 ORTHO05D005806 5.6e-23 113.2 230 36.1
Glyma.15G166700 Glycine max HOM05D004601 ORTHO05D005806 5.6e-23 113.2 170 38.8
Actinidia02499 Actinidia chinensis HOM05D004601 ORTHO05D005806 7.3e-23 112.8 172 38.4
SHI03064 Sapria himalayana HOM05D004601 ORTHO05D005806 9.5e-23 112.5 167 38.3
vmacro05994 Vaccinium macrocarpon HOM05D004601 ORTHO05D005806 9.5e-23 112.5 188 35.6
Haze_22027 Corylus avellana HOM05D004601 ORTHO05D005806 1.2e-22 112.1 247 33.2
Oeu019558.1 Olea europaea HOM05D004601 ORTHO05D005806 1.2e-22 112.1 270 33.0
Medtr2g038030 Medicago truncatula HOM05D004601 ORTHO05D005806 2.1e-22 111.3 172 39.5
PSO063G2966 Papaver somniferum HOM05D004601 ORTHO05D005806 2.1e-22 111.3 230 35.7
Peaxi162Scf00231g01116 Petunia axillaris HOM05D004601 ORTHO05D005806 2.8e-22 110.9 218 36.2
SGA_v2.0_scaffold112G31593 Striga asiatica HOM05D004601 ORTHO05D005806 2.8e-22 110.9 217 34.6
Phvul.009G235800 Phaseolus vulgaris HOM05D004601 ORTHO05D005806 4.7e-22 110.2 168 38.7
arahy.Tifrunner.gnm1.ann1.8TE3EA Arachis hypogaea HOM05D004601 ORTHO05D005806 6.2e-22 109.8 168 36.9
arahy.Tifrunner.gnm1.ann1.BQ8TF8 Arachis hypogaea HOM05D004601 ORTHO05D005806 6.2e-22 109.8 168 36.9
EL10Ac4g10170 Beta vulgaris HOM05D004601 ORTHO05D005806 1.4e-21 108.6 173 36.4
Nitab4.5_0000056g0070 Nicotiana tabacum HOM05D004601 ORTHO05D005806 2.4e-21 107.8 257 34.2
Lalb_Chr00c63g0413841 Lupinus albus HOM05D004601 ORTHO05D005806 6.8e-21 106.3 160 39.4
Zm00001eb071490 Zea mays HOM05D004601 ORTHO05D005806 1.2e-20 105.5 275 32.7
CDE07G0894 Ceratophyllum demersum HOM05D004601 ORTHO05D005806 2.0e-20 104.8 170 35.9
Ah.06g194430 Amaranthus hybridus HOM05D004601 ORTHO05D005806 4.4e-20 103.6 219 32.4
ATR0626G236 Amborella trichopoda HOM05D004601 ORTHO05D005806 5.8e-20 103.2 270 30.4
MBI16_g10345_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 9.9e-20 102.4 168 35.7
AUR62000175 Chenopodium quinoa HOM05D004601 ORTHO05D005806 1.9e-18 98.2 174 33.9
SMO144G0133 Selaginella moellendorffii HOM05D004601 ORTHO05D005806 2.4e-18 97.8 190 35.8
TPR.G7576 Trifolium pratense HOM05D004601 ORTHO05D000001 4.2e-18 97.1 144 38.2
MBI16_g47869_MAGBIO Magnolia biondii HOM05D004601 ORTHO05D005806 7.1e-18 96.3 164 34.8
AUR62039835 Chenopodium quinoa HOM05D004601 ORTHO05D005806 9.2e-18 95.9 174 33.3
Pp3c14_5920 Physcomitrium patens HOM05D004601 ORTHO05D005806 9.2e-18 95.9 233 31.8
Sopen07g006910 Solanum pennellii HOM05D004601 ORTHO05D005806 9.2e-18 95.9 143 39.2
AagrBONN_evm.TU.Sc2ySwM_228.1820 Anthoceros agrestis HOM05D004601 ORTHO05D005806 2.1e-17 94.7 204 32.8
Mapoly0001s0137 Marchantia polymorpha HOM05D004601 ORTHO05D005806 5.1e-16 90.1 201 30.8
Nitab4.5_0006199g0010 Nicotiana tabacum HOM05D004601 ORTHO05D005806 1.1e-15 89.0 165 36.4
CBR_g35050 Chara braunii HOM05D004601 ORTHO05D005806 2.5e-15 87.8 141 33.3
ECA236G3967 Erigeron canadensis HOM05D004601 ORTHO05D005806 2.1e-14 84.7 112 38.4
CAN.G285.3 Capsicum annuum HOM05D004601 ORTHO05D005806 3.4e-12 77.4 102 41.2
PRCOL_00001076 Prasinoderma coloniale HOM05D004601 ORTHO05D005806 1.2e-09 68.9 140 30.0
Cfa023642 Carpinus fangiana HOM05D004601 ORTHO05D005806 1.9e-07 61.6 130 28.5
Actinidia07546 Actinidia chinensis HOM05D004601 ORTHO05D005806 3.3e-07 60.8 102 32.4
SEGI_11293 Sequoiadendron giganteum HOM05D004601 ORTHO05D005806 5.6e-07 60.1 171 28.7
TAR383G0412 Trochodendron aralioides HOM05D004601 ORTHO05D005806 4.8e-06 57.0 95 36.8


User provided reference genes

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