Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
C01p09000 Brassica napus HOM05D004823 ORTHO05D005814 4.1e-116 421.4 213 100.0
BolC1t00891H Brassica oleracea HOM05D004823 ORTHO05D005814 7.3e-97 357.5 190 96.3
BcaC07g41923 Brassica carinata HOM05D004823 ORTHO05D005814 3.8e-53 212.2 297 49.8
C08p49810 Brassica napus HOM05D004823 ORTHO05D005814 3.8e-53 212.2 297 49.8
Thhalv10006571m.g Eutrema salsugineum HOM05D004823 ORTHO05D005814 6.5e-53 211.5 299 50.2
A09p65740 Brassica napus HOM05D004823 ORTHO05D005814 3.2e-52 209.1 297 49.2
BraA09t41917Z Brassica rapa HOM05D004823 ORTHO05D005814 3.2e-52 209.1 297 49.2
AL1G19270 Arabidopsis lyrata HOM05D004823 ORTHO05D005814 4.2e-52 208.8 299 49.8
BolC8t52508H Brassica oleracea HOM05D004823 ORTHO05D005814 4.2e-52 208.8 297 49.5
AT1G08840 Arabidopsis thaliana HOM05D004823 ORTHO05D005814 1.6e-51 206.8 299 49.5
Sp1g07480 Schrenkiella parvula HOM05D004823 ORTHO05D005814 4.7e-51 205.3 299 48.5
CARHR008760 Cardamine hirsuta HOM05D004823 ORTHO05D005814 1.4e-50 203.8 299 48.8
Aa31sc17G210 Aethionema arabicum HOM05D004823 ORTHO05D005814 2.2e-48 196.4 299 47.2
THA.LOC104808236 Tarenaya hassleriana HOM05D004823 ORTHO05D005814 1.4e-42 177.2 297 42.8
BcaC09g51789 Brassica carinata HOM05D004823 ORTHO05D005814 3.1e-39 166.0 94 90.4
PGR083G0266 Punica granatum HOM05D004823 ORTHO05D005814 3.2e-36 156.0 297 40.1
ClCG05G002760 Citrullus lanatus HOM05D004823 ORTHO05D005814 2.7e-35 152.9 252 38.9
Dinv31197 Davidia involucrata HOM05D004823 ORTHO05D005814 3.6e-35 152.5 297 39.1
CSS0005414 Camellia sinensis var. sinensis HOM05D004823 ORTHO05D005814 4.7e-35 152.1 298 38.3
CiPaw.14G012800 Carya illinoinensis HOM05D004823 ORTHO05D005814 6.1e-35 151.8 297 37.7
Nn1g00608 Nelumbo nucifera HOM05D004823 ORTHO05D005814 8.0e-35 151.4 306 37.3
Sc08g0006560 Simmondsia chinensis HOM05D004823 ORTHO05D005814 8.0e-35 151.4 298 37.9
TWI23G0233 Tripterygium wilfordii HOM05D004823 ORTHO05D005814 1.0e-34 151.0 297 37.0
GSVIVG01018406001 Vitis vinifera HOM05D004823 ORTHO05D005814 2.3e-34 149.8 297 37.7
Aqoxy5G01066 Aquilegia oxysepala HOM05D004823 ORTHO05D005814 3.0e-34 149.4 297 36.7
Aqoxy7G00646 Aquilegia oxysepala HOM05D004823 ORTHO05D005814 3.0e-34 149.4 297 36.7
Potri.014G180200 Populus trichocarpa HOM05D004823 ORTHO05D005814 6.8e-34 148.3 297 38.0
RcHm_v2.0_Chr1g0343241 Rosa chinensis HOM05D004823 ORTHO05D005814 6.8e-34 148.3 297 37.4
CANSAT21G1834 Cannabis sativa HOM05D004823 ORTHO05D005814 1.5e-33 147.1 297 38.4
PSO782G4318 Papaver somniferum HOM05D004823 ORTHO05D005814 1.5e-33 147.1 297 36.4
PSO063G2621 Papaver somniferum HOM05D004823 ORTHO05D005814 2.0e-33 146.7 297 36.4
Cfa011006 Carpinus fangiana HOM05D004823 ORTHO05D005814 3.4e-33 146.0 297 38.0
Glyma.06G310500 Glycine max HOM05D004823 ORTHO05D005814 3.4e-33 146.0 297 38.7
TAR375G0889 Trochodendron aralioides HOM05D004823 ORTHO05D005814 3.4e-33 146.0 297 37.7
Lj1g0025017 Lotus japonicus HOM05D004823 ORTHO05D005814 4.4e-33 145.6 297 39.4
Ca_04616_v3 Cicer arietinum L. HOM05D004823 ORTHO05D005814 7.5e-33 144.8 297 37.4
Gorai.012G081700 Gossypium raimondii HOM05D004823 ORTHO05D005814 9.8e-33 144.4 297 37.4
Lalb_Chr03g0040711 Lupinus albus HOM05D004823 ORTHO05D005814 1.3e-32 144.1 297 38.4
CDE11G0321 Ceratophyllum demersum HOM05D004823 ORTHO05D005814 1.7e-32 143.7 235 39.6
Solyc01g088380.3 Solanum lycopersicum HOM05D004823 ORTHO05D005814 1.7e-32 143.7 297 38.4
Sopen01g035210 Solanum pennellii HOM05D004823 ORTHO05D005814 1.7e-32 143.7 297 38.4
Gohir.D04G072675 Gossypium hirsutum HOM05D004823 ORTHO05D005814 2.2e-32 143.3 297 37.0
Thecc.10G001100 Theobroma cacao HOM05D004823 ORTHO05D005814 2.2e-32 143.3 298 36.6
Ciclev10018521m.g Citrus clementina HOM05D004823 ORTHO05D005814 2.8e-32 142.9 298 35.6
Duzib106G1753 Durio zibethinus HOM05D004823 ORTHO05D005814 2.8e-32 142.9 298 37.2
Gohir.A05G333800 Gossypium hirsutum HOM05D004823 ORTHO05D005814 2.8e-32 142.9 297 37.0
unitig_8.g3844 Utricularia gibba HOM05D004823 ORTHO05D005814 2.8e-32 142.9 261 40.2
CAN.G1480.3 Capsicum annuum HOM05D004823 ORTHO05D005814 3.7e-32 142.5 297 38.0
COL.COLO4_19317 Corchorus olitorius HOM05D004823 ORTHO05D005814 3.7e-32 142.5 297 37.0
Manes.05G060200 Manihot esculenta HOM05D004823 ORTHO05D005814 3.7e-32 142.5 298 37.2
Psat3g163800 Pisum sativum HOM05D004823 ORTHO05D005814 3.7e-32 142.5 297 38.7
Prupe.2G112200 Prunus persica HOM05D004823 ORTHO05D005814 3.7e-32 142.5 297 37.4
Cc00_g16960 Coffea canephora HOM05D004823 ORTHO05D005814 4.9e-32 142.1 297 35.0
SGA_v2.0_scaffold578G53026 Striga asiatica HOM05D004823 ORTHO05D005814 1.1e-31 141.0 265 40.4
Atru.chr5.23 Acer truncatum HOM05D004823 ORTHO05D005814 1.4e-31 140.6 305 33.8
Atru.chr5.51 Acer truncatum HOM05D004823 ORTHO05D005814 1.4e-31 140.6 305 33.8
Peaxi162Scf00417g00039 Petunia axillaris HOM05D004823 ORTHO05D005814 1.4e-31 140.6 297 36.7
Medtr7g034575 Medicago truncatula HOM05D004823 ORTHO05D005814 1.8e-31 140.2 298 36.2
AUR62013806 Chenopodium quinoa HOM05D004823 ORTHO05D005814 3.1e-31 139.4 298 35.6
Eucgr.D01139 Eucalyptus grandis HOM05D004823 ORTHO05D005814 3.1e-31 139.4 299 36.5
FAN03G0722 Fragaria x ananassa HOM05D004823 ORTHO05D005814 3.1e-31 139.4 297 35.0
Lj7C553G7 Lonicera japonica HOM05D004823 ORTHO05D005814 3.1e-31 139.4 271 37.6
FvH4_7g08480 Fragaria vesca HOM05D004823 ORTHO05D005814 4.1e-31 139.0 297 35.0
FAN06G0930 Fragaria x ananassa HOM05D004823 ORTHO05D005814 4.1e-31 139.0 297 35.0
arahy.Tifrunner.gnm1.ann1.GG1KFP Arachis hypogaea HOM05D004823 ORTHO05D005814 5.4e-31 138.7 297 36.7
FAN10G0616 Fragaria x ananassa HOM05D004823 ORTHO05D005814 5.4e-31 138.7 297 34.7
FAN10G1986 Fragaria x ananassa HOM05D004823 ORTHO05D005814 5.4e-31 138.7 297 34.7
EL10Ac8g19253 Beta vulgaris HOM05D004823 ORTHO05D005814 7.0e-31 138.3 298 34.6
AUR62023352 Chenopodium quinoa HOM05D004823 ORTHO05D005814 9.2e-31 137.9 297 35.4
CsaV3_3G010270 Cucumis sativus L. HOM05D004823 ORTHO05D005814 9.2e-31 137.9 298 33.2
Peaxi162Scf01124g00124 Petunia axillaris HOM05D004823 ORTHO05D005814 1.2e-30 137.5 297 36.4
Ah.15g091500 Amaranthus hybridus HOM05D004823 ORTHO05D005814 1.6e-30 137.1 295 34.9
arahy.Tifrunner.gnm1.ann1.61K3Y7 Arachis hypogaea HOM05D004823 ORTHO05D005814 1.6e-30 137.1 297 36.7
Phvul.005G016100 Phaseolus vulgaris HOM05D004823 ORTHO05D005814 1.6e-30 137.1 299 35.5
QL04p025376 Quercus lobata HOM05D004823 ORTHO05D005814 2.0e-30 136.7 335 34.6
TPR.G14862 Trifolium pratense HOM05D004823 ORTHO05D005814 2.0e-30 136.7 298 34.9
HanXRQChr08g0226321 Helianthus annuus HOM05D004823 ORTHO05D005814 2.7e-30 136.3 299 35.1
Carub.0001s0819 Capsella rubella HOM05D004823 ORTHO05D005814 3.5e-30 136.0 145 60.0
Oeu034864.1 Olea europaea HOM05D004823 ORTHO05D005814 7.7e-30 134.8 297 36.0
Hund17140 Selenicereus undatus HOM05D004823 ORTHO05D005814 7.7e-30 134.8 297 34.3
ATR0705G006 Amborella trichopoda HOM05D004823 ORTHO05D005814 1.3e-29 134.0 298 33.9
DCAR_029534 Daucus carota HOM05D004823 ORTHO05D005814 1.7e-29 133.7 297 36.0
ECA234G1924 Erigeron canadensis HOM05D004823 ORTHO05D005814 1.7e-29 133.7 297 34.0
VMungo1080G1086 Vigna mungo HOM05D004823 ORTHO05D005814 2.3e-29 133.3 301 35.9
HPP92_003324 Vanilla planifolia HOM05D004823 ORTHO05D005814 5.0e-29 132.1 297 35.7
Migut.B01471 Erythranthe guttata HOM05D004823 ORTHO05D005814 1.1e-28 131.0 297 35.0
Sed0025177 Sechium edule HOM05D004823 ORTHO05D005814 1.9e-28 130.2 298 31.5
Lsat_1_v5_gn_4_44681 Lactuca sativa HOM05D004823 ORTHO05D005814 2.5e-28 129.8 272 36.8
vmacro21094 Vaccinium macrocarpon HOM05D004823 ORTHO05D005814 2.8e-27 126.3 323 33.1
MD07G1085900 Malus domestica HOM05D004823 ORTHO05D005814 3.6e-27 125.9 298 34.6
Rhsim01G0145100 Rhododendron simsii HOM05D004823 ORTHO05D005814 4.7e-27 125.6 343 31.2
Os04g0588200 Oryza sativa ssp. japonica HOM05D004823 ORTHO05D005814 6.1e-27 125.2 297 33.3
Actinidia33293 Actinidia chinensis HOM05D004823 ORTHO05D005814 1.8e-26 123.6 275 34.5
Sabra14G0140300 Salix brachista HOM05D004823 ORTHO05D005814 1.7e-24 117.1 364 31.0
Atru.chr5.137 Acer truncatum HOM05D004823 ORTHO05D005814 9.5e-20 101.3 277 30.7
SHI13671 Sapria himalayana HOM05D004823 ORTHO05D005814 2.1e-19 100.1 143 47.6
Zm00001eb072560 Zea mays HOM05D004823 ORTHO05D005814 1.4e-18 97.4 143 44.1
Nitab4.5_0007244g0010 Nicotiana tabacum HOM05D004823 ORTHO05D005814 1.2e-17 94.4 190 37.9
MELO3C006248.2 Cucumis melo HOM05D004823 ORTHO05D005814 1.5e-17 94.0 281 29.9
AagrBONN_evm.TU.Sc2ySwM_362.2737 Anthoceros agrestis HOM05D004823 ORTHO05D005814 1.3e-16 90.9 144 39.6
Haze_02925 Corylus avellana HOM05D004823 ORTHO05D005814 2.2e-16 90.1 83 56.6
Glyma.04G128350 Glycine max HOM05D004823 ORTHO05D005814 1.9e-15 87.0 63 65.1
Hma1.2p1_0601F.1_g187180 Hydrangea macrophylla HOM05D004823 ORTHO05D005814 4.6e-14 82.4 63 60.3
Nitab4.5_0006227g0020 Nicotiana tabacum HOM05D004823 ORTHO05D005814 3.9e-13 79.3 62 64.5
SEGI_26005 Sequoiadendron giganteum HOM05D004823 ORTHO05D005814 1.5e-12 77.4 79 53.2
Mapoly0039s0120 Marchantia polymorpha HOM05D004823 ORTHO05D005814 1.9e-12 77.0 144 36.1
CBR_g41486 Chara braunii HOM05D004823 ORTHO05D005814 8.1e-11 71.6 135 39.3
SHI13670 Sapria himalayana HOM05D004823 ORTHO05D005814 1.1e-10 71.2 64 54.7
SEGI_04112 Sequoiadendron giganteum HOM05D004823 ORTHO05D005814 4.0e-10 69.3 63 57.1
Cfa026676 Carpinus fangiana HOM05D004823 ORTHO05D005814 1.7e-08 63.9 137 33.6


User provided reference genes

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