Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g41967 Brassica carinata HOM05D003203 ORTHO05D003526 0.0e+00 1117.1 561 100.0
BcaC07g41968 Brassica carinata HOM05D003203 ORTHO05D003526 1.5e-96 357.8 274 73.7
C08p50260 Brassica napus HOM05D003203 ORTHO05D003526 1.5e-96 357.8 274 73.7
BolC8t52555H Brassica oleracea HOM05D003203 ORTHO05D003526 1.5e-96 357.8 274 73.7
A09p66110 Brassica napus HOM05D003203 ORTHO05D003526 1.3e-95 354.8 274 72.6
BraA09t41949Z Brassica rapa HOM05D003203 ORTHO05D003526 1.3e-95 354.8 274 72.6
C05p05960 Brassica napus HOM05D003203 ORTHO05D003526 1.3e-89 334.7 272 66.5
A06p05020 Brassica napus HOM05D003203 ORTHO05D003526 5.1e-89 332.8 272 66.9
BraA06t23708Z Brassica rapa HOM05D003203 ORTHO05D003526 8.7e-89 332.0 272 66.9
BolC5t29358H Brassica oleracea HOM05D003203 ORTHO05D003526 1.1e-88 331.6 272 65.8
Thhalv10006605m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 1.9e-88 330.9 273 66.7
BcaC05g24708 Brassica carinata HOM05D003203 ORTHO05D003526 4.3e-88 329.7 272 65.4
AL1G18200 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.6e-85 320.5 276 63.4
Carub.0011s0009 Capsella rubella HOM05D003203 ORTHO05D003526 2.6e-85 320.5 273 63.4
AL6G53580 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 2.9e-84 317.0 276 62.7
Carub.0001s0725 Capsella rubella HOM05D003203 ORTHO05D003526 2.9e-84 317.0 273 63.4
AL7G46960 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 1.1e-83 315.1 276 62.7
AT1G07910 Arabidopsis thaliana HOM05D003203 ORTHO05D003526 2.5e-83 313.9 273 62.3
AL7G46970 Arabidopsis lyrata HOM05D003203 ORTHO05D003526 4.2e-83 313.2 276 62.3
BcaC07g42504 Brassica carinata HOM05D003203 ORTHO05D003526 3.3e-80 303.5 292 62.3
Aa31sc36G120 Aethionema arabicum HOM05D003203 ORTHO05D003526 1.7e-76 291.2 273 58.6
THA.LOC104815752 Tarenaya hassleriana HOM05D003203 ORTHO05D003526 7.9e-74 282.3 273 57.1
BcaB02g06702 Brassica carinata HOM05D003203 ORTHO05D003526 1.8e-73 281.2 273 59.7
Glyma.11G152960 Glycine max HOM05D003203 ORTHO05D003526 1.9e-67 261.2 273 51.3
CSS0047004 Camellia sinensis var. sinensis HOM05D003203 ORTHO05D003526 7.2e-67 259.2 279 50.2
Manes.11G141000 Manihot esculenta HOM05D003203 ORTHO05D003526 9.4e-67 258.8 273 52.4
Lsat_1_v5_gn_6_26241 Lactuca sativa HOM05D003203 ORTHO05D003526 1.6e-66 258.1 273 50.2
MD11G1129800 Malus domestica HOM05D003203 ORTHO05D003526 3.6e-66 256.9 273 50.2
CiPaw.13G106900 Carya illinoinensis HOM05D003203 ORTHO05D003526 4.6e-66 256.5 279 49.8
COL.COLO4_25248 Corchorus olitorius HOM05D003203 ORTHO05D003526 4.6e-66 256.5 273 50.5
QL01p037166 Quercus lobata HOM05D003203 ORTHO05D003526 6.1e-66 256.1 273 50.9
Psat7g223280 Pisum sativum HOM05D003203 ORTHO05D003526 3.9e-65 253.4 277 48.4
Phvul.011G072500 Phaseolus vulgaris HOM05D003203 ORTHO05D003526 5.1e-65 253.1 277 50.2
Prupe.6G094700 Prunus persica HOM05D003203 ORTHO05D003526 5.1e-65 253.1 273 50.2
Atru.chr3.3692 Acer truncatum HOM05D003203 ORTHO05D003526 8.8e-65 252.3 273 49.8
Lalb_Chr03g0027111 Lupinus albus HOM05D003203 ORTHO05D003526 8.8e-65 252.3 276 49.6
Ciclev10027702m.g Citrus clementina HOM05D003203 ORTHO05D003526 1.1e-64 251.9 277 49.1
CsaV3_1G013020 Cucumis sativus L. HOM05D003203 ORTHO05D003526 1.5e-64 251.5 273 50.2
Oeu005910.3 Olea europaea HOM05D003203 ORTHO05D003526 2.0e-64 251.1 273 49.5
GSVIVG01025133001 Vitis vinifera HOM05D003203 ORTHO05D003526 2.0e-64 251.1 277 50.5
Eucgr.B02467 Eucalyptus grandis HOM05D003203 ORTHO05D003526 2.6e-64 250.8 273 49.5
Haze_23916 Corylus avellana HOM05D003203 ORTHO05D003526 4.4e-64 250.0 277 50.2
HanXRQChr13g0401461 Helianthus annuus HOM05D003203 ORTHO05D003526 4.4e-64 250.0 273 49.8
TAR636G0568 Trochodendron aralioides HOM05D003203 ORTHO05D003526 4.4e-64 250.0 277 48.4
Cfa011365 Carpinus fangiana HOM05D003203 ORTHO05D003526 5.7e-64 249.6 273 50.2
Dinv32789 Davidia involucrata HOM05D003203 ORTHO05D003526 7.4e-64 249.2 273 50.2
AUR62025015 Chenopodium quinoa HOM05D003203 ORTHO05D003526 9.7e-64 248.8 273 49.8
Potri.016G083100 Populus trichocarpa HOM05D003203 ORTHO05D003526 9.7e-64 248.8 273 49.5
MELO3C005030.2 Cucumis melo HOM05D003203 ORTHO05D003526 1.7e-63 248.1 273 49.5
SGA_v2.0_scaffold97G29171 Striga asiatica HOM05D003203 ORTHO05D003526 1.7e-63 248.1 273 49.8
Aqoxy4G03208 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 2.2e-63 247.7 279 47.7
CANSAT54G1869 Cannabis sativa HOM05D003203 ORTHO05D003526 2.2e-63 247.7 273 49.1
Duzib168G0563 Durio zibethinus HOM05D003203 ORTHO05D003526 2.2e-63 247.7 273 49.1
PGR102G2647 Punica granatum HOM05D003203 ORTHO05D003526 2.2e-63 247.7 319 43.6
VMungo1127G1096 Vigna mungo HOM05D003203 ORTHO05D003526 2.8e-63 247.3 277 49.1
arahy.Tifrunner.gnm1.ann1.DWB64P Arachis hypogaea HOM05D003203 ORTHO05D003526 3.7e-63 246.9 283 48.1
TPR.G14912 Trifolium pratense HOM05D003203 ORTHO05D003526 3.7e-63 246.9 273 47.3
Gohir.D05G077500 Gossypium hirsutum HOM05D003203 ORTHO05D003526 6.3e-63 246.1 273 48.4
ATR1159G092 Amborella trichopoda HOM05D003203 ORTHO05D003526 1.1e-62 245.4 273 48.0
AUR62006513 Chenopodium quinoa HOM05D003203 ORTHO05D003526 1.8e-62 244.6 279 49.5
arahy.Tifrunner.gnm1.ann1.GJ7521 Arachis hypogaea HOM05D003203 ORTHO05D003526 3.1e-62 243.8 288 47.9
Gorai.009G078900 Gossypium raimondii HOM05D003203 ORTHO05D003526 4.1e-62 243.4 272 47.8
RcHm_v2.0_Chr5g0060751 Rosa chinensis HOM05D003203 ORTHO05D003526 4.1e-62 243.4 282 47.2
Sabra16G0090500 Salix brachista HOM05D003203 ORTHO05D003526 5.3e-62 243.0 273 49.5
Rhsim01G0220300 Rhododendron simsii HOM05D003203 ORTHO05D003526 6.9e-62 242.7 283 47.7
Medtr4g060795 Medicago truncatula HOM05D003203 ORTHO05D003526 9.1e-62 242.3 273 47.3
Cc01_g11550 Coffea canephora HOM05D003203 ORTHO05D003526 1.2e-61 241.9 273 48.0
DCAR_006042 Daucus carota HOM05D003203 ORTHO05D003526 1.5e-61 241.5 283 47.0
CDE07G0939 Ceratophyllum demersum HOM05D003203 ORTHO05D003526 2.0e-61 241.1 279 47.3
Gohir.A05G074700 Gossypium hirsutum HOM05D003203 ORTHO05D003526 2.0e-61 241.1 273 47.6
FvH4_3g33360 Fragaria vesca HOM05D003203 ORTHO05D003526 3.4e-61 240.4 282 46.8
FAN11G3892 Fragaria x ananassa HOM05D003203 ORTHO05D003526 3.4e-61 240.4 282 46.8
MSTRG.21144 Avicennia marina HOM05D003203 ORTHO05D003526 4.5e-61 240.0 277 47.7
HanXRQChr09g0243461 Helianthus annuus HOM05D003203 ORTHO05D003526 4.5e-61 240.0 285 47.7
Peaxi162Scf00389g00932 Petunia axillaris HOM05D003203 ORTHO05D003526 4.5e-61 240.0 273 47.6
Ca_19241_v3 Cicer arietinum L. HOM05D003203 ORTHO05D003526 5.9e-61 239.6 278 47.8
CAN.G553.12 Capsicum annuum HOM05D003203 ORTHO05D003526 7.7e-61 239.2 273 48.7
RcHm_v2.0_Chr4g0389641 Rosa chinensis HOM05D003203 ORTHO05D003526 7.7e-61 239.2 282 47.2
FAN16G3448 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.0e-60 238.8 282 46.5
Lj3g0012673 Lotus japonicus HOM05D003203 ORTHO05D003526 1.0e-60 238.8 273 48.4
Sp1g06590 Schrenkiella parvula HOM05D003203 ORTHO05D003526 2.2e-60 237.7 164 76.2
TWI31G0332 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 2.2e-60 237.7 274 48.2
Sopen11g030070 Solanum pennellii HOM05D003203 ORTHO05D003526 5.0e-60 236.5 273 47.6
Nn2g10680 Nelumbo nucifera HOM05D003203 ORTHO05D003526 6.5e-60 236.1 273 46.9
Thecc.09G260300 Theobroma cacao HOM05D003203 ORTHO05D003526 1.1e-59 235.3 274 49.3
unitig_736.g22420 Utricularia gibba HOM05D003203 ORTHO05D003526 1.1e-59 235.3 273 46.9
Migut.D02182 Erythranthe guttata HOM05D003203 ORTHO05D003526 1.9e-59 234.6 274 46.7
Lj1C185T11 Lonicera japonica HOM05D003203 ORTHO05D003526 3.2e-59 233.8 273 47.6
vmacro14071 Vaccinium macrocarpon HOM05D003203 ORTHO05D003526 5.5e-59 233.0 339 42.5
FAN12G0401 Fragaria x ananassa HOM05D003203 ORTHO05D003526 7.2e-59 232.6 282 46.8
Nitab4.5_0002129g0110 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.2e-58 231.9 274 48.2
FvH4_4g02320 Fragaria vesca HOM05D003203 ORTHO05D003526 1.6e-58 231.5 282 46.5
PSO765G0203 Papaver somniferum HOM05D003203 ORTHO05D003526 1.6e-58 231.5 273 47.3
Sed0015984 Sechium edule HOM05D003203 ORTHO05D003526 2.1e-58 231.1 273 46.2
Lj1A185G36 Lonicera japonica HOM05D003203 ORTHO05D003526 6.1e-58 229.6 272 47.1
Aqoxy3G02870 Aquilegia oxysepala HOM05D003203 ORTHO05D003526 1.4e-57 228.4 276 43.5
FAN22G0069 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.8e-57 228.0 282 45.7
Lj3g0020808 Lotus japonicus HOM05D003203 ORTHO05D003526 2.3e-57 227.6 303 44.6
ECA233G2891 Erigeron canadensis HOM05D003203 ORTHO05D003526 1.1e-56 225.3 270 46.3
EL10Ac9g22449 Beta vulgaris HOM05D003203 ORTHO05D003526 2.0e-56 224.6 273 45.4
Os07g0191700 Oryza sativa ssp. japonica HOM05D003203 ORTHO05D003526 4.4e-56 223.4 279 44.8
DCAR_024905 Daucus carota HOM05D003203 ORTHO05D003526 5.3e-54 216.5 275 44.4
Migut.N02091 Erythranthe guttata HOM05D003203 ORTHO05D003526 7.0e-54 216.1 278 43.9
CARHR007720 Cardamine hirsuta HOM05D003203 ORTHO05D003526 9.1e-54 215.7 220 57.3
Nitab4.5_0000848g0100 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.0e-53 214.5 292 42.5
SEGI_33151 Sequoiadendron giganteum HOM05D003203 ORTHO05D003526 2.6e-53 214.2 269 43.9
Zm00001eb302520 Zea mays HOM05D003203 ORTHO05D003526 2.2e-52 211.1 277 42.6
Nitab4.5_0004347g0030 Nicotiana tabacum HOM05D003203 ORTHO05D003526 3.8e-52 210.3 273 43.6
PSO063G5461 Papaver somniferum HOM05D003203 ORTHO05D003526 3.8e-52 210.3 274 43.8
HPP92_010123 Vanilla planifolia HOM05D002295 ORTHO05D002789 3.8e-52 210.3 271 42.1
Thhalv10023078m.g Eutrema salsugineum HOM05D003203 ORTHO05D003526 2.1e-50 204.5 281 47.0
Cpa.g.sc139.68 Carica papaya HOM05D003203 ORTHO05D003526 6.7e-49 199.5 251 45.8
Nitab4.5_0010520g0020 Nicotiana tabacum HOM05D003203 ORTHO05D003526 1.2e-48 198.7 272 41.2
SalBow6G0781 Salvia bowleyana HOM05D003203 ORTHO05D003526 1.7e-47 194.9 281 44.8
SalBow3G4618 Salvia bowleyana HOM05D003203 ORTHO05D003526 2.7e-45 187.6 278 42.1
PGSC0003DMG400027376 Solanum tuberosum HOM05D003203 ORTHO05D003526 3.2e-43 180.6 239 42.7
Lj2A1035T51 Lonicera japonica HOM05D003203 ORTHO05D003526 9.8e-40 169.1 162 51.9
CAN.G352.39 Capsicum annuum HOM05D003203 ORTHO05D003526 3.7e-39 167.2 169 52.7
AagrBONN_evm.TU.Sc2ySwM_362.2654 Anthoceros agrestis HOM05D003203 ORTHO05D003526 1.2e-37 162.2 276 32.6
Nitab4.5_0001802g0120 Nicotiana tabacum HOM05D003203 ORTHO05D003526 2.0e-37 161.4 169 52.1
AagrBONN_evm.TU.Sc2ySwM_244.3 Anthoceros agrestis HOM05D003203 ORTHO05D003526 3.5e-37 160.6 284 32.4
SpUn0840_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 5.9e-37 159.8 87 90.8
FAN21G1129 Fragaria x ananassa HOM05D003203 ORTHO05D003526 7.7e-37 159.5 169 51.5
Mapoly0005s0012 Marchantia polymorpha HOM05D003203 ORTHO05D003526 8.6e-36 156.0 283 33.6
CARHR204760 Cardamine hirsuta HOM05D003203 ORTHO05D003526 2.5e-35 154.5 141 61.0
Actinidia15612 Actinidia chinensis HOM05D003203 ORTHO05D003526 7.2e-35 152.9 161 49.7
SMO223G0015 Selaginella moellendorffii HOM05D003203 ORTHO05D003526 7.2e-35 152.9 280 34.6
AagrBONN_evm.TU.Sc2ySwM_341.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 3.6e-34 150.6 275 31.6
Sp3g30710 Schrenkiella parvula HOM05D003203 ORTHO05D003526 1.4e-33 148.7 79 88.6
TAR633G1300 Trochodendron aralioides HOM05D003203 ORTHO05D003526 4.0e-33 147.1 168 46.4
AagrBONN_evm.TU.Sc2ySwM_117.4033 Anthoceros agrestis HOM05D003203 ORTHO05D003526 7.0e-30 136.3 275 30.2
PSO339G3960 Papaver somniferum HOM05D003203 ORTHO05D003526 1.2e-29 135.6 163 44.2
FAN17G1794 Fragaria x ananassa HOM05D003203 ORTHO05D003526 5.9e-29 133.3 142 50.0
Pp3c27_2850 Physcomitrium patens HOM05D003203 ORTHO05D003526 1.0e-28 132.5 283 30.7
COL.COLO4_32909 Corchorus olitorius HOM05D003203 ORTHO05D003526 5.6e-27 126.7 78 75.6
PSO765G0134 Papaver somniferum HOM05D003203 ORTHO05D003526 6.1e-26 123.2 132 50.8
CBR_g39406 Chara braunii HOM05D003203 ORTHO05D003526 1.0e-25 122.5 276 28.6
Hma1.2p1_0559F.1_g178620 Hydrangea macrophylla HOM05D003203 ORTHO05D003526 8.9e-25 119.4 100 59.0
AagrBONN_evm.TU.Sc2ySwM_342.1 Anthoceros agrestis HOM05D003203 ORTHO05D003526 7.5e-24 116.3 171 37.4
SHI27633 Sapria himalayana HOM05D003203 ORTHO05D003526 8.3e-23 112.8 78 64.1
Dinv24671 Davidia involucrata HOM05D003203 ORTHO05D003526 1.0e-20 105.9 117 47.9
SpUn0831_0010 Schrenkiella parvula HOM05D003203 ORTHO05D003526 5.0e-20 103.6 54 87.0
Actinidia00021 Actinidia chinensis HOM05D003203 ORTHO05D003526 8.0e-18 96.3 61 72.1
TWI75G1314 Tripterygium wilfordii HOM05D003203 ORTHO05D003526 1.5e-16 92.0 82 59.8
Sc15g0001570 Simmondsia chinensis HOM05D003203 ORTHO05D003526 4.4e-16 90.5 60 65.0
arahy.Tifrunner.gnm1.ann1.VS5L85 Arachis hypogaea HOM05D003203 ORTHO05D003526 5.8e-16 90.1 180 32.8
Lj2A1035T52 Lonicera japonica HOM05D003203 ORTHO05D003526 5.8e-16 90.1 74 59.5
CAN.G352.40 Capsicum annuum HOM05D003203 ORTHO05D003526 1.1e-14 85.9 54 72.2
Cc04_g16280 Coffea canephora HOM05D003203 ORTHO05D003526 1.1e-14 85.9 149 36.2
SHI27629 Sapria himalayana HOM05D003203 ORTHO05D003526 4.1e-14 84.0 60 55.0
FAN17G1981 Fragaria x ananassa HOM05D003203 ORTHO05D003526 1.2e-13 82.4 54 66.7
BcaB02g06701 Brassica carinata HOM05D006884 ORTHO05D008604 2.3e-09 68.2 58 69.0
AT1G07970 Arabidopsis thaliana HOM05D006884 ORTHO05D008604 1.7e-07 62.0 33 97.0
BraA06t23709Z Brassica rapa HOM05D006884 ORTHO05D008604 1.7e-07 62.0 33 97.0
Carub.0001s0732 Capsella rubella HOM05D006884 ORTHO05D008604 2.2e-07 61.6 53 66.0
CARHR007750 Cardamine hirsuta HOM05D006884 ORTHO05D008604 2.9e-07 61.2 33 93.9
A06p05030 Brassica napus HOM05D006884 ORTHO05D008604 4.9e-07 60.5 33 93.9
C05p05970 Brassica napus HOM05D006884 ORTHO05D008604 2.4e-06 58.2 45 75.6
AL1G18300 Arabidopsis lyrata HOM05D006884 ORTHO05D008604 3.2e-06 57.8 33 90.9


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