Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC07g38067 Brassica carinata HOM05D005550 ORTHO05D006679 7.4e-56 220.3 112 100.0
BolC8t48465H Brassica oleracea HOM05D005550 ORTHO05D006679 1.3e-44 183.0 94 97.9
BolC8t48469H Brassica oleracea HOM05D005550 ORTHO05D006679 1.3e-44 183.0 94 97.9
BcaC07g38064 Brassica carinata HOM05D005550 ORTHO05D006679 1.7e-44 182.6 94 96.8
BcaB04g18410 Brassica carinata HOM05D005550 ORTHO05D006679 3.8e-44 181.4 94 96.8
A08p13130 Brassica napus HOM05D005550 ORTHO05D006679 1.4e-43 179.5 94 95.7
BraA08t33293Z Brassica rapa HOM05D005550 ORTHO05D006679 1.4e-43 179.5 94 95.7
AL7G37330 Arabidopsis lyrata HOM05D005550 ORTHO05D006679 1.9e-43 179.1 94 96.8
AT4G17380 Arabidopsis thaliana HOM05D005550 ORTHO05D006679 1.9e-43 179.1 94 96.8
Thhalv10024454m.g Eutrema salsugineum HOM05D005550 ORTHO05D006679 1.9e-43 179.1 94 96.8
Carub.0007s2403 Capsella rubella HOM05D005550 ORTHO05D006679 2.5e-43 178.7 94 95.7
CARHR223990 Cardamine hirsuta HOM05D005550 ORTHO05D006679 1.2e-42 176.4 94 94.7
Aa31LG6G120 Aethionema arabicum HOM05D005550 ORTHO05D006679 1.6e-42 176.0 94 94.7
THA.LOC104812808 Tarenaya hassleriana HOM05D005550 ORTHO05D006679 1.1e-38 163.3 91 91.2
Gorai.008G234100 Gossypium raimondii HOM05D005550 ORTHO05D006679 1.5e-37 159.5 91 89.0
CANSAT21G2208 Cannabis sativa HOM05D005550 ORTHO05D006679 2.0e-37 159.1 91 87.9
COL.COLO4_37144 Corchorus olitorius HOM05D005550 ORTHO05D006679 2.0e-37 159.1 91 87.9
RcHm_v2.0_Chr7g0203731 Rosa chinensis HOM05D005550 ORTHO05D006679 2.0e-37 159.1 91 89.0
Thecc.03G248800 Theobroma cacao HOM05D005550 ORTHO05D006679 2.6e-37 158.7 91 86.8
Gohir.D12G218532 Gossypium hirsutum HOM05D005550 ORTHO05D006679 3.4e-37 158.3 90 88.9
HanXRQChr06g0164431 Helianthus annuus HOM05D005550 ORTHO05D006679 3.4e-37 158.3 91 87.9
FvH4_5g19230 Fragaria vesca HOM05D005550 ORTHO05D006679 4.5e-37 157.9 91 87.9
FAN04G3230 Fragaria x ananassa HOM05D005550 ORTHO05D006679 4.5e-37 157.9 91 87.9
FAN08G0299 Fragaria x ananassa HOM05D005550 ORTHO05D006679 4.5e-37 157.9 91 87.9
Hma1.2p1_1136F.1_g260510 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 5.9e-37 157.5 91 86.8
Hma1.2p1_1136F.1_g260520 Hydrangea macrophylla HOM05D005550 ORTHO05D006679 5.9e-37 157.5 91 86.8
Actinidia02146 Actinidia chinensis HOM05D005550 ORTHO05D006679 1.7e-36 156.0 91 86.8
Sed0012504 Sechium edule HOM05D005550 ORTHO05D006679 1.7e-36 156.0 91 86.8
Atru.chr9.1288 Acer truncatum HOM05D005550 ORTHO05D006679 2.2e-36 155.6 94 83.0
Haze_16325 Corylus avellana HOM05D005550 ORTHO05D006679 2.9e-36 155.2 91 87.9
Duzib068G0290 Durio zibethinus HOM05D005550 ORTHO05D006679 2.9e-36 155.2 91 86.8
Aqoxy7G00819 Aquilegia oxysepala HOM05D005550 ORTHO05D006679 5.0e-36 154.5 90 86.7
Prupe.5G066100 Prunus persica HOM05D005550 ORTHO05D006679 5.0e-36 154.5 91 86.8
QL12p011636 Quercus lobata HOM05D005550 ORTHO05D006679 6.5e-36 154.1 91 86.8
MBI04_g09523_MAGBIO Magnolia biondii HOM05D005550 ORTHO05D006679 8.5e-36 153.7 91 85.7
Rhsim11G0009700 Rhododendron simsii HOM05D005550 ORTHO05D006679 1.1e-35 153.3 91 84.6
CiPaw.11G081300 Carya illinoinensis HOM05D005550 ORTHO05D006679 1.4e-35 152.9 91 85.7
TWI15G1253 Tripterygium wilfordii HOM05D005550 ORTHO05D006679 1.4e-35 152.9 91 85.7
CSS0014382 Camellia sinensis var. sinensis HOM05D005550 ORTHO05D006679 1.9e-35 152.5 91 85.7
ClCG01G004190 Citrullus lanatus HOM05D005550 ORTHO05D006679 1.9e-35 152.5 92 84.8
Lj2C221G5 Lonicera japonica HOM05D005550 ORTHO05D006679 2.5e-35 152.1 94 84.0
GSVIVG01004726001 Vitis vinifera HOM05D005550 ORTHO05D006679 3.2e-35 151.8 91 86.8
Ciclev10018920m.g Citrus clementina HOM05D005550 ORTHO05D006679 4.2e-35 151.4 91 83.5
Lsat_1_v5_gn_3_1200 Lactuca sativa HOM05D005550 ORTHO05D006679 4.2e-35 151.4 92 85.9
Potri.001G156200 Populus trichocarpa HOM05D005550 ORTHO05D006679 4.2e-35 151.4 91 82.4
ECA248G1640 Erigeron canadensis HOM05D005550 ORTHO05D006679 5.5e-35 151.0 90 83.3
Nitab4.5_0002225g0010 Nicotiana tabacum HOM05D005550 ORTHO05D006679 1.2e-34 149.8 91 84.6
Solyc08g007330.3 Solanum lycopersicum HOM05D005550 ORTHO05D006679 1.2e-34 149.8 91 83.5
FAN18G0162 Fragaria x ananassa HOM05D005550 ORTHO05D006679 1.6e-34 149.4 91 85.7
Migut.A01122 Erythranthe guttata HOM05D005550 ORTHO05D006679 2.1e-34 149.1 91 83.5
Cc08_g12230 Coffea canephora HOM05D005550 ORTHO05D006679 2.7e-34 148.7 89 83.1
Glyma.11G034600 Glycine max HOM05D005550 ORTHO05D006679 2.7e-34 148.7 91 80.2
Sopen08g003270 Solanum pennellii HOM05D005550 ORTHO05D006679 3.6e-34 148.3 91 82.4
Cpa.g.sc29.180 Carica papaya HOM05D005550 ORTHO05D006679 6.1e-34 147.5 91 80.2
PGR042G2104 Punica granatum HOM05D005550 ORTHO05D006679 6.1e-34 147.5 90 85.6
TAR375G0818 Trochodendron aralioides HOM05D005550 ORTHO05D006679 1.8e-33 146.0 89 82.0
Sc22g0000960 Simmondsia chinensis HOM05D005550 ORTHO05D006679 3.0e-33 145.2 91 79.1
MSTRG.12114 Avicennia marina HOM05D005550 ORTHO05D006679 3.9e-33 144.8 92 82.6
Sabra01G0134700 Salix brachista HOM05D005550 ORTHO05D006679 3.9e-33 144.8 91 79.1
unitig_744.g24475 Utricularia gibba HOM05D005550 ORTHO05D006679 5.1e-33 144.4 91 82.4
Nitab4.5_0000712g0130 Nicotiana tabacum HOM05D005550 ORTHO05D006679 8.8e-33 143.7 96 80.2
PSO063G2362 Papaver somniferum HOM05D005550 ORTHO05D006679 8.8e-33 143.7 96 79.2
Phvul.002G057100 Phaseolus vulgaris HOM05D005550 ORTHO05D006679 8.8e-33 143.7 90 78.9
Hund11605 Selenicereus undatus HOM05D005550 ORTHO05D006679 8.8e-33 143.7 91 79.1
Eucgr.E00409 Eucalyptus grandis HOM05D005550 ORTHO05D006679 1.1e-32 143.3 91 82.4
PSO782G0795 Papaver somniferum HOM05D005550 ORTHO05D006679 1.1e-32 143.3 87 83.9
MELO3C005519.2 Cucumis melo HOM05D005550 ORTHO05D006679 2.0e-32 142.5 91 82.4
Lj2g0021636 Lotus japonicus HOM05D005550 ORTHO05D006679 2.0e-32 142.5 91 76.9
VMungo1215G0570 Vigna mungo HOM05D005550 ORTHO05D006679 2.0e-32 142.5 91 81.3
Nn6g33903 Nelumbo nucifera HOM05D005550 ORTHO05D006679 2.6e-32 142.1 92 77.2
EL10Ac5g12365 Beta vulgaris HOM05D005550 ORTHO05D006679 7.4e-32 140.6 91 81.3
Lalb_Chr16g0379511 Lupinus albus HOM05D005550 ORTHO05D006679 7.4e-32 140.6 93 73.1
AUR62007105 Chenopodium quinoa HOM05D005550 ORTHO05D006679 1.3e-31 139.8 91 80.2
AUR62019968 Chenopodium quinoa HOM05D005550 ORTHO05D006679 1.3e-31 139.8 91 80.2
ATR0057G027 Amborella trichopoda HOM05D005550 ORTHO05D006679 3.7e-31 138.3 91 74.7
arahy.Tifrunner.gnm1.ann1.7NLF36 Arachis hypogaea HOM05D005550 ORTHO05D006679 3.7e-31 138.3 91 76.9
arahy.Tifrunner.gnm1.ann1.XE7N8H Arachis hypogaea HOM05D005550 ORTHO05D006679 3.7e-31 138.3 91 76.9
Ca_24591_v3 Cicer arietinum L. HOM05D005550 ORTHO05D006679 3.7e-31 138.3 90 76.7
Medtr5g012900 Medicago truncatula HOM05D005550 ORTHO05D006679 3.7e-31 138.3 91 76.9
CsaV3_5G004390 Cucumis sativus L. HOM05D005550 ORTHO05D006679 4.8e-31 137.9 85 82.4
SGA_v2.0_scaffold104G30171 Striga asiatica HOM05D005550 ORTHO05D006679 8.2e-31 137.1 92 77.2
Psat2g176640 Pisum sativum HOM05D005550 ORTHO05D006679 2.4e-30 135.6 94 72.3
SHI20465 Sapria himalayana HOM05D005550 ORTHO05D006679 2.4e-30 135.6 91 76.9
TPR.G18117 Trifolium pratense HOM05D005550 ORTHO05D006679 2.4e-30 135.6 94 74.5
Os07g0486000 Oryza sativa ssp. japonica HOM05D005550 ORTHO05D006679 4.1e-30 134.8 87 79.3
SEGI_18944 Sequoiadendron giganteum HOM05D005550 ORTHO05D006679 2.2e-28 129.0 88 72.7
vmacro00189 Vaccinium macrocarpon HOM05D005550 ORTHO05D006679 1.8e-25 119.4 70 84.3
SalBow6G3355 Salvia bowleyana HOM05D005550 ORTHO05D006679 4.4e-24 114.8 121 57.0
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 1.1e-22 110.2 71 77.5
HPP92_025386 Vanilla planifolia HOM05D005550 ORTHO05D006679 1.6e-21 106.3 73 74.0
Mapoly0001s0167 Marchantia polymorpha HOM05D005550 ORTHO05D006679 3.5e-21 105.1 81 64.2
Pp3c2_940 Physcomitrium patens HOM05D005550 ORTHO05D006679 7.7e-21 104.0 83 57.8
AagrBONN_evm.TU.Sc2ySwM_344.184 Anthoceros agrestis HOM05D005550 ORTHO05D006679 2.1e-18 95.9 91 50.5
SMO340G0170 Selaginella moellendorffii HOM05D005550 ORTHO05D006679 3.6e-18 95.1 101 54.5
Peaxi162Scf00102g01071 Petunia axillaris HOM05D005550 ORTHO05D006679 8.0e-18 94.0 53 88.7
Nn1g05728 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.6e-13 79.7 57 71.9
Nn1g05737 Nelumbo nucifera HOM05D005550 ORTHO05D006679 1.6e-13 79.7 57 71.9


User provided reference genes

Program Settings