Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 1.1e-190 669.8 346 100.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.9e-187 659.1 346 98.6
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.8e-185 652.5 345 97.7
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 2.1e-178 629.0 350 94.6
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 2.1e-178 629.0 350 94.6
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 6.0e-157 557.8 364 82.1
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 1.9e-147 526.2 371 76.8
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 2.2e-143 512.7 358 77.7
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.2e-143 512.7 361 78.1
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 2.5e-142 509.2 357 77.6
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-140 503.4 357 79.0
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 4.8e-138 495.0 370 73.5
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 1.3e-130 470.3 377 70.0
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 7.4e-115 417.9 364 62.9
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 5.2e-100 368.6 375 56.3
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.2e-99 367.5 346 59.2
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 4.4e-99 365.5 365 57.3
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.7e-95 353.6 369 54.7
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 2.5e-94 349.7 362 57.7
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.6e-93 347.1 365 55.9
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.6e-93 347.1 356 55.6
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 1.6e-93 347.1 370 54.1
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.8e-92 343.6 358 55.3
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.0e-91 340.1 377 51.2
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.1e-89 332.8 385 50.4
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 5.4e-89 332.0 382 49.7
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 2.7e-88 329.7 362 52.8
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.7e-88 329.7 352 52.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.3e-87 327.4 357 52.4
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 2.3e-87 326.6 311 55.3
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 2.3e-87 326.6 360 53.3
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 8.6e-87 324.7 369 51.2
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 4.3e-86 322.4 368 51.4
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 4.3e-86 322.4 384 49.0
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.6e-86 322.0 384 51.3
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 9.5e-86 321.2 372 53.0
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 9.5e-86 321.2 371 49.3
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 9.5e-86 321.2 380 51.1
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.2e-85 320.9 368 51.6
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 1.2e-85 320.9 370 49.7
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 3.6e-85 319.3 369 49.3
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.7e-85 318.9 358 51.4
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 6.1e-85 318.5 360 51.9
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 8.0e-85 318.2 354 50.0
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 8.0e-85 318.2 371 50.1
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.0e-84 317.8 371 50.1
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.8e-84 317.0 375 49.1
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.3e-84 316.6 380 50.0
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.0e-84 316.2 371 49.9
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 3.0e-84 316.2 385 49.6
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 4.0e-84 315.8 352 53.1
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 4.0e-84 315.8 367 49.0
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 5.2e-84 315.5 365 50.4
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 6.8e-84 315.1 384 48.4
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 6.8e-84 315.1 369 49.9
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 8.9e-84 314.7 356 51.1
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 1.2e-83 314.3 341 51.9
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 1.2e-83 314.3 369 49.9
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.5e-83 313.9 351 51.6
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 2.6e-83 313.2 369 50.7
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 3.4e-83 312.8 370 48.6
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 5.8e-83 312.0 372 48.7
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 7.5e-83 311.6 338 55.3
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 7.5e-83 311.6 352 50.6
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 1.3e-82 310.8 377 48.5
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.9e-82 309.7 358 49.7
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 2.9e-82 309.7 349 52.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 8.3e-82 308.1 355 50.1
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.1e-81 307.8 381 49.6
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 1.9e-81 307.0 347 52.7
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 3.2e-81 306.2 367 48.5
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 4.6e-80 302.4 371 46.1
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.0e-79 301.2 346 50.6
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.3e-79 300.8 326 52.5
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.0e-79 299.7 306 53.9
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 5.0e-79 298.9 358 47.8
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.3e-78 295.8 384 47.1
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.3e-78 295.8 380 45.5
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 8.0e-77 291.6 323 52.9
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 3.2e-73 279.6 443 41.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 5.4e-73 278.9 358 49.7
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 9.2e-73 278.1 314 50.0
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 2.8e-69 266.5 348 49.1
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 2.9e-66 256.5 320 44.4
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 3.5e-64 249.6 278 49.6
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 8.6e-63 245.0 341 44.9
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.5e-62 244.2 363 42.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.5e-62 244.2 329 43.5
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.1e-61 240.4 290 49.3
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 3.2e-57 226.5 272 47.1
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.2e-53 214.5 534 32.0
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 4.4e-51 206.1 316 38.0
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 4.2e-49 199.5 233 49.4
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.5e-48 196.4 174 60.3
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 6.6e-47 192.2 321 38.6
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.3e-46 189.9 161 60.2
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.4e-44 183.7 110 79.1
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.8e-39 167.5 198 53.0
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 8.1e-37 158.7 197 49.7
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.4e-36 157.9 365 33.4
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 5.8e-35 152.5 203 45.8
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.3e-34 151.4 132 56.1
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 8.4e-34 148.7 226 42.9
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 9.6e-30 135.2 97 58.8
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 2.8e-29 133.7 207 41.5
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.3e-22 109.8 245 35.1
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 7.4e-22 109.0 84 66.7
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 7.7e-19 99.0 142 43.7
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.2e-18 97.4 114 47.4
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 1.4e-07 61.6 126 31.7


User provided reference genes

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