Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC01g06037 Brassica carinata HOM05D000042 ORTHO05D003657 4.7e-53 211.1 117 100.0
BolC3t14347H Brassica oleracea HOM05D000042 ORTHO05D003657 2.1e-21 105.9 68 89.7
A03p16730 Brassica napus HOM05D000042 ORTHO05D003657 4.0e-20 101.7 68 86.8
BraA03t10958Z Brassica rapa HOM05D000042 ORTHO05D003657 4.0e-20 101.7 68 86.8
BcaB01g04138 Brassica carinata HOM05D000042 ORTHO05D003657 2.6e-19 99.0 74 78.4
A02p00340 Brassica napus HOM05D000042 ORTHO05D003657 1.6e-16 89.7 68 77.9
BraA02t05019Z Brassica rapa HOM05D000042 ORTHO05D003657 1.6e-16 89.7 68 77.9
Carub.0006s0860 Capsella rubella HOM05D000042 ORTHO05D003657 2.7e-16 89.0 70 75.7
BcaB01g05547 Brassica carinata HOM05D000042 ORTHO05D003657 7.8e-16 87.4 68 75.0
BcaC03g13297 Brassica carinata HOM05D000042 ORTHO05D003657 1.3e-15 86.7 68 75.0
C02p04280 Brassica napus HOM05D000042 ORTHO05D003657 1.3e-15 86.7 68 75.0
Thhalv10014726m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 1.9e-14 82.8 69 72.5
AT5G10140 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 4.3e-14 81.6 69 69.6
AL6G20600 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 5.6e-14 81.3 69 72.5
C03p19690 Brassica napus HOM05D000042 ORTHO05D003657 9.5e-14 80.5 54 87.0
AT1G77080 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.6e-13 79.7 67 71.6
CARHR203150 Cardamine hirsuta HOM05D000042 ORTHO05D003657 1.6e-13 79.7 69 71.0
BcaB08g37135 Brassica carinata HOM05D000042 ORTHO05D003657 2.1e-13 79.3 78 65.4
AL6G20630 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 3.6e-13 78.6 69 69.6
BcaC04g19338 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-13 78.6 76 65.8
BcaC04g19339 Brassica carinata HOM05D000042 ORTHO05D003657 3.6e-13 78.6 76 65.8
BcaC04g19334 Brassica carinata HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
BcaC04g19336 Brassica carinata HOM05D000042 ORTHO05D003657 4.7e-13 78.2 76 65.8
A10p27400 Brassica napus HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
C09p67320 Brassica napus HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
C09p67350 Brassica napus HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
C09p67380 Brassica napus HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
BolC9t59496H Brassica oleracea HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
BolC9t59500H Brassica oleracea HOM05D000042 ORTHO05D003657 4.7e-13 78.2 83 60.2
BolC9t59501H Brassica oleracea HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
BraA10t44790Z Brassica rapa HOM05D000042 ORTHO05D003657 4.7e-13 78.2 69 71.0
AL2G37250 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.1e-12 77.0 74 63.5
C03p04920 Brassica napus HOM05D000042 ORTHO05D003657 1.4e-12 76.6 68 70.6
BolC3t13023H Brassica oleracea HOM05D000042 ORTHO05D003657 1.4e-12 76.6 68 70.6
BcaC03g18294 Brassica carinata HOM05D000042 ORTHO05D003657 2.0e-11 72.8 76 60.5
A03p04430 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-11 72.8 68 69.1
C02p63700 Brassica napus HOM05D000042 ORTHO05D003657 2.0e-11 72.8 76 60.5
BolC2t12438H Brassica oleracea HOM05D000042 ORTHO05D003657 2.0e-11 72.8 76 60.5
BraA03t09788Z Brassica rapa HOM05D000042 ORTHO05D003657 2.0e-11 72.8 68 69.1
Sp6g33260 Schrenkiella parvula HOM05D000042 ORTHO05D003657 3.4e-11 72.0 102 52.0
BolC2t12443H Brassica oleracea HOM05D000042 ORTHO05D003657 4.4e-11 71.6 69 60.9
C02p63750 Brassica napus HOM05D000042 ORTHO05D003657 5.8e-11 71.2 76 59.2
BcaB07g29771 Brassica carinata HOM05D000042 ORTHO05D003657 2.2e-10 69.3 76 57.9
AT5G65050 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 2.9e-10 68.9 68 61.8
BcaC03g18301 Brassica carinata HOM05D000042 ORTHO05D003657 2.9e-10 68.9 69 56.5
A02p43650 Brassica napus HOM05D000042 ORTHO05D003657 2.9e-10 68.9 69 60.9
C02p63770 Brassica napus HOM05D000042 ORTHO05D003657 2.9e-10 68.9 69 56.5
CARHR278980 Cardamine hirsuta HOM05D000042 ORTHO05D003657 2.9e-10 68.9 69 58.0
CARHR278990 Cardamine hirsuta HOM05D000042 ORTHO05D003657 8.3e-10 67.4 71 54.9
AT5G65060 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.1e-09 67.0 69 60.9
Sp2g28130 Schrenkiella parvula HOM05D000042 ORTHO05D003657 1.1e-09 67.0 73 56.2
BraA02t09289Z Brassica rapa HOM05D000042 ORTHO05D003657 1.9e-09 66.2 69 60.9
CARHR278970 Cardamine hirsuta HOM05D000042 ORTHO05D003657 2.4e-09 65.9 53 66.0
Sp2g28150 Schrenkiella parvula HOM05D000042 ORTHO05D003657 2.4e-09 65.9 63 60.3
Aa31LG1G16890 Aethionema arabicum HOM05D000042 ORTHO05D003657 4.1e-09 65.1 69 59.4
A02p43670 Brassica napus HOM05D000042 ORTHO05D003657 4.1e-09 65.1 69 53.6
C03p61060 Brassica napus HOM05D000042 ORTHO05D003657 4.1e-09 65.1 76 53.9
BolC3t18368H Brassica oleracea HOM05D000042 ORTHO05D003657 4.1e-09 65.1 76 53.9
BraA02t09291Z Brassica rapa HOM05D000042 ORTHO05D003657 4.1e-09 65.1 69 53.6
AL233U10010 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 5.4e-09 64.7 68 58.8
Carub.0002s2396 Capsella rubella HOM05D000042 ORTHO05D003657 5.4e-09 64.7 58 60.3
Thhalv10004949m.g Eutrema salsugineum HOM05D000042 ORTHO05D003657 5.4e-09 64.7 69 53.6
AL8G42580 Arabidopsis lyrata HOM05D000042 ORTHO05D003657 1.6e-08 63.2 78 52.6
AT5G65070 Arabidopsis thaliana HOM05D000042 ORTHO05D003657 1.6e-08 63.2 69 55.1
BraA02t09290Z Brassica rapa HOM05D000042 ORTHO05D003657 2.7e-08 62.4 65 53.8
BcaB07g29773 Brassica carinata HOM05D000042 ORTHO05D003657 6.0e-08 61.2 69 52.2
BraA06t26122Z Brassica rapa HOM05D000042 ORTHO05D003657 6.0e-08 61.2 69 53.6
Carub.0008s2591 Capsella rubella HOM05D000042 ORTHO05D003657 6.0e-08 61.2 69 55.1
C02p63760 Brassica napus HOM05D000042 ORTHO05D003657 3.9e-07 58.5 68 50.0
A06p31880 Brassica napus HOM05D000042 ORTHO05D003657 1.5e-06 56.6 69 55.1
BolC2t12446H Brassica oleracea HOM05D000042 ORTHO05D003657 1.9e-06 56.2 73 49.3
BcaC01g02737 Brassica carinata HOM05D000042 ORTHO05D003657 3.3e-06 55.5 70 52.9
A06p31890 Brassica napus HOM05D000042 ORTHO05D003657 7.3e-06 54.3 70 51.4
Peaxi162Scf00023g02913 Petunia axillaris HOM05D000042 ORTHO05D003657 7.3e-06 54.3 58 46.6


User provided reference genes

Program Settings