Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04515 Brassica carinata HOM05D001487 ORTHO05D001365 2.1e-48 195.3 91 100.0
BolC3t13871H Brassica oleracea HOM05D001487 ORTHO05D001365 1.7e-42 175.6 91 90.1
BcaC01g06628 Brassica carinata HOM05D001487 ORTHO05D001365 8.4e-42 173.3 91 89.0
A03p12160 Brassica napus HOM05D001487 ORTHO05D001365 1.1e-41 172.9 91 87.9
BcaB01g04511 Brassica carinata HOM05D001487 ORTHO05D001365 1.6e-40 169.1 91 86.8
BcaB01g04516 Brassica carinata HOM05D001487 ORTHO05D001365 1.6e-40 169.1 91 86.8
BolC3t13870H Brassica oleracea HOM05D001487 ORTHO05D001365 5.1e-39 164.1 91 83.5
BcaC01g06632 Brassica carinata HOM05D001487 ORTHO05D001365 4.8e-37 157.5 85 85.9
BcaB01g04509 Brassica carinata HOM05D001487 ORTHO05D001365 8.1e-37 156.8 92 82.6
Sp3g24140 Schrenkiella parvula HOM05D001487 ORTHO05D001365 1.3e-34 149.4 86 77.9
CARHR076060 Cardamine hirsuta HOM05D001487 ORTHO05D001365 3.2e-33 144.8 88 77.3
AL3G11210 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 9.0e-28 126.7 79 72.2
Carub.0002s2025 Capsella rubella HOM05D001487 ORTHO05D001365 9.0e-28 126.7 81 71.6
A02p29050 Brassica napus HOM05D001487 ORTHO05D001365 2.0e-27 125.6 81 70.4
BcaC09g47801 Brassica carinata HOM05D001487 ORTHO05D001365 4.5e-27 124.4 81 69.1
BcaC09g47807 Brassica carinata HOM05D001487 ORTHO05D001365 4.5e-27 124.4 81 69.1
BolC1t05751H Brassica oleracea HOM05D001487 ORTHO05D001365 4.5e-27 124.4 81 69.1
AT2G05970 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.8e-27 124.0 86 66.3
AT4G17565 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.7e-26 122.5 87 65.5
Thhalv10015550m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 2.2e-26 122.1 76 72.4
A09p39270 Brassica napus HOM05D001487 ORTHO05D001365 6.5e-26 120.6 81 67.9
CARHR052960 Cardamine hirsuta HOM05D001487 ORTHO05D001365 1.1e-25 119.8 90 64.4
Carub.0003s0112 Capsella rubella HOM05D001487 ORTHO05D001365 1.9e-25 119.0 79 65.8
Thhalv10027445m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.2e-25 118.2 86 65.1
AL7G37050 Arabidopsis lyrata HOM05D000053 ORTHO05D001365 7.9e-24 113.6 85 60.0
C01p11210 Brassica napus HOM05D001487 ORTHO05D001365 1.0e-23 113.2 86 66.3
AL7G37040 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.8e-23 112.5 77 67.5
BcaC01g06627 Brassica carinata HOM05D001487 ORTHO05D001365 2.3e-23 112.1 59 89.8
BraA01t00906Z Brassica rapa HOM05D001487 ORTHO05D001365 1.9e-22 109.0 87 65.5
BcaC09g51630 Brassica carinata HOM05D001487 ORTHO05D001365 2.2e-21 105.5 85 65.9
A01p09640 Brassica napus HOM05D001487 ORTHO05D001365 1.2e-16 89.7 76 64.5
Carub.0008s0080 Capsella rubella HOM05D001487 ORTHO05D001365 2.7e-16 88.6 80 55.0
BcaC09g47800 Brassica carinata HOM05D001487 ORTHO05D001365 6.1e-16 87.4 62 66.1
BcaC04g19949 Brassica carinata HOM05D001487 ORTHO05D001365 2.3e-15 85.5 82 52.4
BcaB05g22373 Brassica carinata HOM05D001487 ORTHO05D001365 6.7e-15 84.0 81 50.6
BcaC03g18566 Brassica carinata HOM05D001487 ORTHO05D001365 8.8e-15 83.6 81 50.6
C02p13880 Brassica napus HOM05D001487 ORTHO05D001365 8.8e-15 83.6 81 50.6
BolC2t07507H Brassica oleracea HOM05D001487 ORTHO05D001365 8.8e-15 83.6 81 50.6
BcaNung01709 Brassica carinata HOM05D001487 ORTHO05D001365 1.1e-14 83.2 79 53.2
BcaNung01710 Brassica carinata HOM05D001487 ORTHO05D001365 3.3e-14 81.6 80 55.0
A03p53200 Brassica napus HOM05D001487 ORTHO05D001365 3.3e-14 81.6 82 47.6
BraA03t14395Z Brassica rapa HOM05D001487 ORTHO05D001365 3.3e-14 81.6 77 51.9
A03p53240 Brassica napus HOM05D001487 ORTHO05D001365 4.3e-14 81.3 82 51.2
CARHR061980 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.3e-14 81.3 86 52.3
BraA03t14390Z Brassica rapa HOM05D001487 ORTHO05D001365 5.7e-14 80.9 82 47.6
BcaNung00815 Brassica carinata HOM05D001487 ORTHO05D001365 7.4e-14 80.5 83 51.8
C07p51560 Brassica napus HOM05D001487 ORTHO05D001365 7.4e-14 80.5 83 51.8
Thhalv10013894m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 7.4e-14 80.5 81 50.6
AL7G31490 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 9.7e-14 80.1 81 48.1
AT4G22165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.3e-13 79.7 83 49.4
Carub.0007s1915 Capsella rubella HOM05D001487 ORTHO05D001365 2.2e-13 79.0 79 48.1
CARHR072250 Cardamine hirsuta HOM05D001487 ORTHO05D001365 3.7e-13 78.2 82 48.8
AT4G22060 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 6.3e-13 77.4 90 46.7
BcaNung00079 Brassica carinata HOM05D001487 ORTHO05D001365 1.8e-12 75.9 61 67.2
A03p53270 Brassica napus HOM05D001487 ORTHO05D001365 3.1e-12 75.1 71 52.1
BraA03t14387Z Brassica rapa HOM05D001487 ORTHO05D001365 3.1e-12 75.1 82 47.6
CARHR199170 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.1e-12 74.7 80 50.0
Carub.0006s1237 Capsella rubella HOM05D001487 ORTHO05D001365 5.3e-12 74.3 80 50.0
AL7G31480 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 6.9e-12 73.9 79 45.6
C08p53010 Brassica napus HOM05D001487 ORTHO05D001365 6.9e-12 73.9 78 51.3
Carub.0007s1930 Capsella rubella HOM05D001487 ORTHO05D001365 6.9e-12 73.9 86 46.5
AT4G22180 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 9.1e-12 73.6 79 44.3
C08p52970 Brassica napus HOM05D001487 ORTHO05D001365 9.1e-12 73.6 78 51.3
BolC8t52813H Brassica oleracea HOM05D001487 ORTHO05D001365 9.1e-12 73.6 78 51.3
A09p68400 Brassica napus HOM05D001487 ORTHO05D001365 1.2e-11 73.2 82 47.6
BraA09t42176Z Brassica rapa HOM05D001487 ORTHO05D001365 1.2e-11 73.2 82 47.6
AL8G44570 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.5e-11 72.8 82 46.3
BcaB02g09869 Brassica carinata HOM05D001487 ORTHO05D001365 1.5e-11 72.8 80 45.0
CARHR283650 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.0e-11 72.4 78 48.7
AL6G24840 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.6e-11 72.0 80 47.5
AT4G22660 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 3.4e-11 71.6 80 46.2
BcaB01g05410 Brassica carinata HOM05D001487 ORTHO05D001365 3.4e-11 71.6 88 45.5
BcaC01g00756 Brassica carinata HOM05D001487 ORTHO05D001365 3.4e-11 71.6 91 44.0
AT5G66830 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 4.5e-11 71.2 82 46.3
AT1G69090 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.9e-11 70.9 80 46.2
A03p53350 Brassica napus HOM05D001487 ORTHO05D001365 5.9e-11 70.9 78 47.4
BraA03t14399Z Brassica rapa HOM05D001487 ORTHO05D001365 5.9e-11 70.9 78 47.4
Carub.0007s1928 Capsella rubella HOM05D001487 ORTHO05D001365 5.9e-11 70.9 87 46.0
Thhalv10028141m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.0e-10 70.1 81 44.4
BcaB01g05407 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-10 69.3 88 43.2
BcaB01g05408 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-10 69.3 88 43.2
BcaB01g05409 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-10 69.3 88 43.2
BcaNung00809 Brassica carinata HOM05D001487 ORTHO05D001365 1.7e-10 69.3 79 44.3
AT4G22170 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.2e-10 68.9 77 44.2
CARHR229040 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.2e-10 68.9 81 46.9
BcaNung00808 Brassica carinata HOM05D001487 ORTHO05D001365 2.9e-10 68.6 79 44.3
Carub.0007s2121 Capsella rubella HOM05D001487 ORTHO05D001365 2.9e-10 68.6 96 41.7
BcaNung00818 Brassica carinata HOM05D001487 ORTHO05D001365 3.8e-10 68.2 76 48.7
A03p05550 Brassica napus HOM05D001487 ORTHO05D001365 3.8e-10 68.2 88 44.3
BcaC01g04751 Brassica carinata HOM05D001487 ORTHO05D001365 5.0e-10 67.8 74 45.9
A08p15560 Brassica napus HOM05D001487 ORTHO05D001365 5.0e-10 67.8 91 41.8
C03p34190 Brassica napus HOM05D001487 ORTHO05D001365 5.0e-10 67.8 74 45.9
BolC3t15728H Brassica oleracea HOM05D001487 ORTHO05D001365 5.0e-10 67.8 77 44.2
BraA03t12034Z Brassica rapa HOM05D001487 ORTHO05D001365 5.0e-10 67.8 74 45.9
BraA08t33536Z Brassica rapa HOM05D001487 ORTHO05D001365 5.0e-10 67.8 91 41.8
Carub.0007s1914 Capsella rubella HOM05D001487 ORTHO05D001365 5.0e-10 67.8 78 43.6
CARHR229010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.5e-10 67.4 80 46.2
BcaB01g02842 Brassica carinata HOM05D001487 ORTHO05D001365 8.5e-10 67.0 76 43.4
BraA03t09894Z Brassica rapa HOM05D001487 ORTHO05D001365 1.1e-09 66.6 88 43.2
Carub.0001s2909 Capsella rubella HOM05D001487 ORTHO05D001365 1.1e-09 66.6 85 42.4
Carub.0004s0068 Capsella rubella HOM05D001487 ORTHO05D001365 1.1e-09 66.6 83 43.4
AL1G60840 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.4e-09 66.2 80 47.5
AT5G14160 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.4e-09 66.2 73 46.6
AL7G30780 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.5e-09 65.5 76 44.7
AL7G31500 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.2e-09 65.1 76 46.1
A02p04530 Brassica napus HOM05D001487 ORTHO05D001365 3.2e-09 65.1 76 44.7
BraA02t05414Z Brassica rapa HOM05D001487 ORTHO05D001365 3.2e-09 65.1 76 44.7
CARHR229570 Cardamine hirsuta HOM05D001487 ORTHO05D001365 3.2e-09 65.1 78 44.9
Thhalv10026778m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.2e-09 65.1 70 45.7
C07p51570 Brassica napus HOM05D001487 ORTHO05D001365 4.2e-09 64.7 46 65.2
Carub.0006s2739 Capsella rubella HOM05D001487 ORTHO05D001365 4.2e-09 64.7 77 48.1
CARHR061990 Cardamine hirsuta HOM05D001487 ORTHO05D001365 4.2e-09 64.7 63 50.8
AL7G31520 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.5e-09 64.3 73 49.3
AL9U10710 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.5e-09 64.3 37 75.7
Carub.0007s3024 Capsella rubella HOM05D001487 ORTHO05D001365 5.5e-09 64.3 79 41.8
CARHR062010 Cardamine hirsuta HOM05D001487 ORTHO05D001365 5.5e-09 64.3 93 38.7
Thhalv10026894m.g Eutrema salsugineum HOM05D001110 ORTHO05D000942 5.5e-09 64.3 81 45.7
Thhalv10025429m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 7.2e-09 63.9 75 46.7
BraA01t01294Z Brassica rapa HOM05D001487 ORTHO05D001365 9.4e-09 63.5 78 41.0
AL919U10020 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.2e-08 63.2 94 40.4
AT3G03730 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 1.2e-08 63.2 94 39.4
A01p13530 Brassica napus HOM05D001487 ORTHO05D001365 1.6e-08 62.8 78 39.7
AT4G14165 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.1e-08 62.4 72 44.4
BcaNung00814 Brassica carinata HOM05D001487 ORTHO05D001365 2.1e-08 62.4 39 69.2
BcaNung01712 Brassica carinata HOM05D001487 ORTHO05D001365 2.1e-08 62.4 64 50.0
CARHR224270 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.1e-08 62.4 38 71.1
BolC3t13163H Brassica oleracea HOM05D001487 ORTHO05D001365 2.7e-08 62.0 88 43.2
BraA06t27782Z Brassica rapa HOM05D001487 ORTHO05D001365 2.7e-08 62.0 82 43.9
Carub.0007s1850 Capsella rubella HOM05D001487 ORTHO05D001365 2.7e-08 62.0 73 43.8
Aa31LG5G4870 Aethionema arabicum HOM05D001487 ORTHO05D001365 3.6e-08 61.6 85 43.5
AL3G13540 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.6e-08 61.6 94 40.4
Aa31LG7G13450 Aethionema arabicum HOM05D001487 ORTHO05D001365 4.7e-08 61.2 83 45.8
Aa31LG7G12950 Aethionema arabicum HOM05D001487 ORTHO05D001365 6.1e-08 60.8 83 44.6
CARHR174970 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.1e-08 60.8 80 47.5
CARHR188180 Cardamine hirsuta HOM05D001487 ORTHO05D001365 6.1e-08 60.8 85 42.4
Thhalv10027492m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 6.1e-08 60.8 75 44.0
Aa31LG7G13500 Aethionema arabicum HOM05D001487 ORTHO05D001365 7.9e-08 60.5 80 45.0
BcaNung03757 Brassica carinata HOM05D001487 ORTHO05D001365 7.9e-08 60.5 78 38.5
C07p51640 Brassica napus HOM05D001487 ORTHO05D001365 1.0e-07 60.1 73 43.8
BolC7t46800H Brassica oleracea HOM05D001487 ORTHO05D001365 1.0e-07 60.1 82 42.7
BolC9t52936H Brassica oleracea HOM05D001487 ORTHO05D001365 1.0e-07 60.1 88 40.9
Thhalv10009751m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.0e-07 60.1 79 44.3
AL6G37020 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.4e-07 59.7 81 45.7
BcaC03g17988 Brassica carinata HOM05D001487 ORTHO05D001365 1.4e-07 59.7 82 43.9
C02p60390 Brassica napus HOM05D002415 ORTHO05D002522 1.4e-07 59.7 82 43.9
C07p41400 Brassica napus HOM05D001487 ORTHO05D001365 1.4e-07 59.7 82 42.7
Thhalv10025466m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.4e-07 59.7 78 46.2
Aa31LG7G13440 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.8e-07 59.3 87 42.5
Aa31LG7G13480 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.8e-07 59.3 83 43.4
AL7G31470 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.8e-07 59.3 59 44.1
BcaNung02037 Brassica carinata HOM05D001487 ORTHO05D001365 1.8e-07 59.3 79 45.6
Aa31LG7G13070 Aethionema arabicum HOM05D001487 ORTHO05D001365 2.3e-07 58.9 82 41.5
AL3G44060 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.3e-07 58.9 79 43.0
AL6G44880 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 2.3e-07 58.9 83 43.4
AT2G14290 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 2.3e-07 58.9 84 41.7
A06p35190 Brassica napus HOM05D001487 ORTHO05D001365 2.3e-07 58.9 79 44.3
C03p06460 Brassica napus HOM05D001487 ORTHO05D001365 2.3e-07 58.9 88 43.2
BraA06t26440Z Brassica rapa HOM05D001487 ORTHO05D001365 2.3e-07 58.9 79 44.3
Carub.0007s3493 Capsella rubella HOM05D001487 ORTHO05D001365 2.3e-07 58.9 82 45.1
C07p43370 Brassica napus HOM05D001487 ORTHO05D001365 3.0e-07 58.5 79 45.6
CARHR229730 Cardamine hirsuta HOM05D001487 ORTHO05D001365 3.0e-07 58.5 84 41.7
AL6G37130 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.9e-07 58.2 79 44.3
Thhalv10010442m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 3.9e-07 58.2 80 45.0
AL1G41000 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 5.1e-07 57.8 79 46.8
AT5G25290 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.1e-07 57.8 79 45.6
BcaB05g25248 Brassica carinata HOM05D001487 ORTHO05D001365 5.1e-07 57.8 82 41.5
BcaB07g29903 Brassica carinata HOM05D001487 ORTHO05D001365 5.1e-07 57.8 87 42.5
BraA01t01297Z Brassica rapa HOM05D001487 ORTHO05D001365 5.1e-07 57.8 78 43.6
BraA02t09019Z Brassica rapa HOM05D001487 ORTHO05D001365 6.7e-07 57.4 79 44.3
AL998U10020 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 8.8e-07 57.0 94 39.4
BcaC02g09409 Brassica carinata HOM05D001487 ORTHO05D001365 8.8e-07 57.0 91 41.8
Carub.0003s2688 Capsella rubella HOM05D001487 ORTHO05D001365 8.8e-07 57.0 88 39.8
CARHR229070 Cardamine hirsuta HOM05D001487 ORTHO05D001365 8.8e-07 57.0 55 54.5
Aa31LG7G13420 Aethionema arabicum HOM05D001487 ORTHO05D001365 1.1e-06 56.6 80 41.2
A01p13550 Brassica napus HOM05D001487 ORTHO05D001365 1.1e-06 56.6 78 42.3
BolC4t25814H Brassica oleracea HOM05D001487 ORTHO05D001365 1.1e-06 56.6 91 41.8
AL1G41020 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 1.5e-06 56.2 79 46.8
BolC2t12094H Brassica oleracea HOM05D002415 ORTHO05D002522 1.5e-06 56.2 82 42.7
Thhalv10003406m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 1.5e-06 56.2 85 44.7
CARHR229030 Cardamine hirsuta HOM05D001487 ORTHO05D001365 2.0e-06 55.8 76 44.7
Thhalv10003011m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 2.6e-06 55.5 86 41.9
AL3G13350 Arabidopsis lyrata HOM05D001487 ORTHO05D001365 3.3e-06 55.1 89 33.7
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 3.3e-06 55.1 87 37.9
Aa31LG7G13470 Aethionema arabicum HOM05D001487 ORTHO05D001365 4.4e-06 54.7 81 43.2
AT2G24080 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 4.4e-06 54.7 82 39.0
BcaB02g09872 Brassica carinata HOM05D001487 ORTHO05D001365 4.4e-06 54.7 60 41.7
AT1G27540 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.7e-06 54.3 79 44.3
AT1G27580 Arabidopsis thaliana HOM05D001487 ORTHO05D001365 5.7e-06 54.3 79 44.3
A02p40670 Brassica napus HOM05D001487 ORTHO05D001365 5.7e-06 54.3 87 39.1
BraA02t09013Z Brassica rapa HOM05D002415 ORTHO05D002522 5.7e-06 54.3 87 39.1
Thhalv10005623m.g Eutrema salsugineum HOM05D001487 ORTHO05D001365 5.7e-06 54.3 83 41.0
BcaB07g29901 Brassica carinata HOM05D001487 ORTHO05D001365 7.4e-06 53.9 81 42.0
Carub.0006s2740 Capsella rubella HOM05D001487 ORTHO05D001365 7.4e-06 53.9 86 44.2


User provided reference genes

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