Gene: AT4G22165
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT4G22165
- Transcript Identifier AT4G22165.1
- Gene Type Coding gene
- Location Chr4 : 11734328-11735419 : positive
Gene Family Information
- ID HOM05D001487
- #Genes/#Species 427/11
- Phylogenetic origin
- ID ORTHO05D001365
- #Genes/#Species 423/11
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid AT4G22165.1
- uniprot P0CG94
Descriptions
- Description F-box protein (DUF295)
- Computational description CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22660.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process | |
| GO:0009742 | ISO | PLAZA Tree-based Orthology | brassinosteroid mediated signaling pathway | AT3G03730 |
| GO:0006511 | ISO | PLAZA Tree-based Orthology | ubiquitin-dependent protein catabolic process | AT2G03560 |
| GO:1900459 | ISO | PLAZA Tree-based Orthology | positive regulation of brassinosteroid mediated signaling pathway | AT3G03730 |
| GO:0016567 | ISO | PLAZA Tree-based Orthology | protein ubiquitination | AT4G12810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0061630 | ISO | PLAZA Tree-based Orthology | ubiquitin protein ligase activity | AT4G12810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISM | Gene Ontology | nucleus | |
| GO:0009506 | ISO | PLAZA Tree-based Orthology | plasmodesma | AT4G14165 |
| GO:0005737 | ISO | PLAZA Tree-based Orthology | cytoplasm | AT4G12810 |
| GO:0019005 | ISO | PLAZA Tree-based Orthology | SCF ubiquitin ligase complex | AT4G12810 |
| GO:0005730 | ISO | PLAZA Tree-based Orthology | nucleolus | AT4G12810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |