Gene: AT2G14290

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G14290
  • Transcript Identifier AT2G14290.1
  • Gene Type Coding gene
  • Location Chr2 : 6057439-6058500 : negative

Gene Family Information

  • ID HOM05D001487
  • #Genes/#Species 427/11
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G14290.1
  • uniprot Q9ZQ60

Descriptions

  • Description LL-diaminopimelate protein (DUF295)
  • Computational description CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT5G25290.1); Has 351 Blast hits to 340 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 349; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0009742
ISO
PLAZA Tree-based Orthologybrassinosteroid mediated signaling pathway AT3G03730
GO:0006511
ISO
PLAZA Tree-based Orthologyubiquitin-dependent protein catabolic process AT2G03560
GO:1900459
ISO
PLAZA Tree-based Orthologypositive regulation of brassinosteroid mediated signaling pathway AT3G03730
GO:0016567
ISO
PLAZA Tree-based Orthologyprotein ubiquitination AT4G12810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Tree-based Orthologyubiquitin protein ligase activity AT4G12810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISM
Gene Ontologychloroplast
GO:0009506
ISO
PLAZA Tree-based Orthologyplasmodesma AT4G14165
GO:0005737
ISO
PLAZA Tree-based Orthologycytoplasm AT4G12810
GO:0019005
ISO
PLAZA Tree-based OrthologySCF ubiquitin ligase complex AT4G12810
GO:0005730
ISO
PLAZA Tree-based Orthologynucleolus AT4G12810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR005174 Domain unknown function DUF295
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated