Gene: AT4G22060

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G22060
  • Transcript Identifier AT4G22060.1
  • Gene Type Coding gene
  • Location Chr4 : 11687620-11688819 : positive

Gene Family Information

  • ID HOM05D001487
  • #Genes/#Species 427/11
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G22060.1
  • uniprot O65454

Descriptions

  • Description F-box protein (DUF295)
  • Computational description CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Protein of unknown function DUF295 (InterPro:IPR005174); BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22180.1); Has 455 Blast hits to 441 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 453; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008150
ND
Gene Ontologybiological_process
GO:0009742
ISO
PLAZA Tree-based Orthologybrassinosteroid mediated signaling pathway AT3G03730
GO:0006511
ISO
PLAZA Tree-based Orthologyubiquitin-dependent protein catabolic process AT2G03560
GO:1900459
ISO
PLAZA Tree-based Orthologypositive regulation of brassinosteroid mediated signaling pathway AT3G03730
GO:0016567
ISO
PLAZA Tree-based Orthologyprotein ubiquitination AT4G12810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003674
ND
Gene Ontologymolecular_function
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Tree-based Orthologyubiquitin protein ligase activity AT4G12810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0009506
ISO
PLAZA Tree-based Orthologyplasmodesma AT4G14165
GO:0005737
ISO
PLAZA Tree-based Orthologycytoplasm AT4G12810
GO:0019005
ISO
PLAZA Tree-based OrthologySCF ubiquitin ligase complex AT4G12810
GO:0005730
ISO
PLAZA Tree-based Orthologynucleolus AT4G12810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005174 Domain unknown function DUF295
IPR036047 F-box-like domain superfamily
IPR001810 F-box domain
Mapman id Description
35.1 not assigned.annotated