Gene: Carub.0007s1915

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0007s1915
  • Transcript Identifier Carub.0007s1915.1
  • Gene Type Coding gene
  • Location scaffold_7 : 7176872-7178077 : positive

Gene Family Information

  • ID HOM05D001487
  • #Genes/#Species 427/11
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0007s1915.v1.1
  • pacid 39234923
  • synonym Carubv10007075m.g

Descriptions

  • Description PTHR20995//PTHR20995:SF21 - FAMILY NOT NAMED // F-BOX FAMILY PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009742
ISO
PLAZA Tree-based Orthologybrassinosteroid mediated signaling pathway AT3G03730
GO:0006511
ISO
PLAZA Tree-based Orthologyubiquitin-dependent protein catabolic process AT2G03560
GO:1900459
ISO
PLAZA Tree-based Orthologypositive regulation of brassinosteroid mediated signaling pathway AT3G03730
GO:0016567
ISO
PLAZA Tree-based Orthologyprotein ubiquitination AT4G12810

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0061630
ISO
PLAZA Tree-based Orthologyubiquitin protein ligase activity AT4G12810

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Tree-based Orthologyplasmodesma AT4G14165
GO:0005737
ISO
PLAZA Tree-based Orthologycytoplasm AT4G12810
GO:0019005
ISO
PLAZA Tree-based OrthologySCF ubiquitin ligase complex AT4G12810
GO:0005730
ISO
PLAZA Tree-based Orthologynucleolus AT4G12810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001810 F-box domain
IPR005174 Domain unknown function DUF295
IPR036047 F-box-like domain superfamily
Mapman id Description
35.1 not assigned.annotated