Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 4.0e-129 464.9 262 100.0
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 2.8e-74 282.7 266 66.5
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 1.4e-73 280.4 276 65.2
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 5.0e-71 271.9 265 64.9
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 7.2e-70 268.1 263 64.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 2.1e-69 266.5 267 61.4
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.1e-69 266.5 258 61.2
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 1.5e-67 260.4 265 61.9
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 4.4e-67 258.8 262 61.1
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.8e-66 256.1 262 54.6
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 6.3e-66 255.0 258 58.9
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.8e-65 253.4 263 60.1
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 2.4e-65 253.1 262 61.5
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 3.1e-65 252.7 264 57.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 5.3e-65 251.9 263 58.2
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 5.3e-65 251.9 265 58.1
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 7.0e-65 251.5 264 56.8
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 7.0e-65 251.5 267 62.9
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.0e-64 250.0 262 55.7
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 2.7e-64 249.6 261 58.6
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.7e-64 249.6 262 56.5
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 2.7e-64 249.6 262 60.3
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 4.5e-64 248.8 262 59.5
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 5.9e-64 248.4 262 56.1
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 7.7e-64 248.1 259 53.7
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 1.7e-63 246.9 262 60.3
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 2.9e-63 246.1 263 59.7
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 2.9e-63 246.1 263 59.7
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 5.0e-63 245.4 262 61.5
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 6.5e-63 245.0 264 59.1
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 8.5e-63 244.6 266 53.4
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 1.1e-62 244.2 262 60.7
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.1e-62 244.2 263 60.1
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.1e-62 244.2 261 58.6
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 3.2e-62 242.7 262 57.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 3.2e-62 242.7 267 61.8
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.2e-62 242.7 292 49.3
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 4.2e-62 242.3 264 58.7
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 5.5e-62 241.9 261 62.5
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.6e-61 240.4 259 59.1
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 1.6e-61 240.4 262 55.3
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 2.1e-61 240.0 258 54.7
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 3.6e-61 239.2 289 48.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 4.7e-61 238.8 262 58.4
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 4.7e-61 238.8 263 58.9
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 4.7e-61 238.8 262 60.3
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 6.1e-61 238.4 268 58.6
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 6.1e-61 238.4 264 58.7
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 1.0e-60 237.7 262 55.0
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.0e-60 236.1 262 54.6
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.0e-60 235.7 262 59.2
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 6.8e-60 235.0 262 59.2
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 8.8e-60 234.6 262 59.2
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.4e-59 232.6 262 55.7
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.4e-59 232.6 265 57.0
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 1.3e-58 230.7 268 58.2
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.7e-58 229.2 262 56.9
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.4e-57 227.3 266 56.8
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.4e-57 226.5 262 55.0
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 2.4e-57 226.5 258 51.2
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 4.1e-57 225.7 264 56.1
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 7.0e-57 224.9 258 50.8
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 2.3e-55 219.9 261 55.6
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.3e-55 219.9 250 58.0
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 6.6e-55 218.4 262 55.7
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 6.6e-55 218.4 259 58.7
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 2.5e-54 216.5 263 54.0
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 2.5e-54 216.5 263 57.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 5.5e-54 215.3 261 57.9
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 5.5e-54 215.3 258 53.5
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 7.2e-54 214.9 261 52.5
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 2.3e-52 209.9 262 48.5
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 2.3e-52 209.9 306 49.7
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.3e-52 209.9 259 56.8
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 3.0e-52 209.5 264 54.2
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 5.7e-51 205.3 261 51.0
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.8e-50 203.0 301 51.2
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 3.7e-50 202.6 263 52.1
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 4.9e-50 202.2 259 50.6
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 6.3e-50 201.8 265 50.6
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 1.2e-48 197.6 260 52.3
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.0e-47 194.5 262 53.4
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 1.0e-47 194.5 256 44.9
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 8.6e-47 191.4 260 52.7
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.1e-46 191.0 260 47.3
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 9.5e-46 188.0 265 50.6
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 6.1e-45 185.3 262 47.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 1.5e-43 180.6 259 46.7
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 4.4e-43 179.1 260 46.5
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.7e-42 177.2 262 50.8
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.1e-41 174.5 262 45.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.1e-41 174.5 301 45.8
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.3e-39 167.5 261 47.1
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 6.6e-39 165.2 249 42.6
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.9e-38 163.7 116 68.1
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 2.5e-38 163.3 218 54.6
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 4.3e-38 162.5 293 45.1
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 2.8e-37 159.8 217 55.8
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 4.1e-33 146.0 295 42.7
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 4.3e-30 136.0 102 64.7
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 3.6e-29 132.9 287 38.7
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 8.9e-28 128.3 149 55.7
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 1.2e-27 127.9 334 34.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 2.6e-27 126.7 216 45.8
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 1.6e-24 117.5 70 77.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.7e-24 116.7 188 40.4
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.3e-23 113.6 188 40.4
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.0e-23 113.2 70 75.7
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 8.6e-23 111.7 262 35.5
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 8.1e-21 105.1 147 51.7
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.0e-19 100.5 152 53.3
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.7e-16 90.1 210 44.8
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 2.8e-13 80.1 123 46.3
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 74.3 146 37.0
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.5e-11 74.3 146 37.0
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.0e-11 73.9 190 33.2
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.4e-09 67.0 188 31.4
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 5.1e-07 59.3 62 54.8


User provided reference genes

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