Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy523s001 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.9e-245 852.0 431 100.0
Aqoxy3G03623 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 9.6e-237 823.2 425 98.1
Aqoxy4G02207 Aquilegia oxysepala HOM05D000924 ORTHO05D001209 1.6e-199 699.5 425 84.5
TAR622G0150 Trochodendron aralioides HOM05D000924 ORTHO05D001209 1.1e-155 553.9 425 66.6
Nn4g23416 Nelumbo nucifera HOM05D000924 ORTHO05D001209 1.0e-145 520.8 425 63.3
Dinv17404 Davidia involucrata HOM05D000924 ORTHO05D001209 9.8e-141 504.2 425 61.4
Cfa019322 Carpinus fangiana HOM05D000924 ORTHO05D001209 6.4e-140 501.5 426 61.7
PSO478G0555 Papaver somniferum HOM05D000924 ORTHO05D001209 2.5e-136 489.6 430 62.3
MBI16_g05786_MAGBIO Magnolia biondii HOM05D000924 ORTHO05D001209 7.3e-136 488.0 426 61.7
QL10p019292 Quercus lobata HOM05D000924 ORTHO05D001209 8.1e-135 484.6 426 60.8
PSO017G0961 Papaver somniferum HOM05D000924 ORTHO05D001209 1.4e-134 483.8 430 61.9
Prupe.4G035000 Prunus persica HOM05D000924 ORTHO05D001209 1.2e-133 480.7 425 59.1
Potri.015G056501 Populus trichocarpa HOM05D000924 ORTHO05D001209 4.4e-133 478.8 427 58.1
CANSAT80G0652 Cannabis sativa HOM05D000924 ORTHO05D001209 2.9e-132 476.1 429 59.7
Ciclev10020262m.g Citrus clementina HOM05D000924 ORTHO05D001209 6.4e-132 474.9 427 59.0
GSVIVG01007875001 Vitis vinifera HOM05D000924 ORTHO05D001209 8.3e-132 474.6 425 58.8
Duzib205G0140 Durio zibethinus HOM05D000924 ORTHO05D001209 5.4e-131 471.9 427 59.0
Atru.chr9.419 Acer truncatum HOM05D000924 ORTHO05D001209 3.9e-129 465.7 427 58.5
Gorai.008G198400 Gossypium raimondii HOM05D000924 ORTHO05D001209 1.1e-128 464.2 426 58.7
Gohir.A12G182100 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.5e-128 463.8 427 59.3
Lj5C103G8 Lonicera japonica HOM05D000924 ORTHO05D001209 1.9e-128 463.4 426 57.0
FvH4_5g13990 Fragaria vesca HOM05D000924 ORTHO05D001209 7.3e-128 461.5 426 58.7
Manes.06G085400 Manihot esculenta HOM05D000924 ORTHO05D001209 7.3e-128 461.5 429 57.8
FAN18G1430 Fragaria x ananassa HOM05D000924 ORTHO05D001209 9.5e-128 461.1 426 58.7
Lsat_1_v5_gn_5_22540 Lactuca sativa HOM05D000924 ORTHO05D001209 2.1e-127 459.9 426 58.0
MD06G1201900 Malus domestica HOM05D000924 ORTHO05D001209 3.6e-127 459.1 426 58.7
RcHm_v2.0_Chr7g0182981 Rosa chinensis HOM05D000924 ORTHO05D001209 4.7e-127 458.8 429 58.7
COL.COLO4_06749 Corchorus olitorius HOM05D000924 ORTHO05D001209 4.0e-126 455.7 426 58.2
Thecc.03G100600 Theobroma cacao HOM05D000924 ORTHO05D001209 3.4e-125 452.6 425 56.7
Cpa.g.sc94.44 Carica papaya HOM05D000924 ORTHO05D001209 9.9e-125 451.1 426 56.6
EL10Ac5g11118 Beta vulgaris HOM05D000924 ORTHO05D001209 4.9e-124 448.7 427 57.6
HanXRQChr05g0157291 Helianthus annuus HOM05D000924 ORTHO05D001209 1.1e-123 447.6 429 56.2
THA.LOC104818343 Tarenaya hassleriana HOM05D000924 ORTHO05D001209 2.4e-123 446.4 427 55.0
Hund09903 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.2e-123 445.7 425 56.9
Hund09904 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.2e-123 445.7 425 56.9
TWI60G0107 Tripterygium wilfordii HOM05D000924 ORTHO05D001209 4.2e-123 445.7 430 56.0
AUR62021574 Chenopodium quinoa HOM05D000924 ORTHO05D001209 5.4e-123 445.3 425 57.4
Rhsim08G0146700 Rhododendron simsii HOM05D000924 ORTHO05D001209 9.2e-123 444.5 426 55.9
Glyma.06G202500 Glycine max HOM05D000924 ORTHO05D001209 6.0e-122 441.8 425 55.5
Lj1g0003461 Lotus japonicus HOM05D000924 ORTHO05D001209 6.0e-122 441.8 426 55.4
Ah.11g047880 Amaranthus hybridus HOM05D000924 ORTHO05D001209 1.0e-121 441.0 425 56.5
Haze_07712 Corylus avellana HOM05D000924 ORTHO05D001209 1.7e-121 440.3 410 58.3
vmacro17603 Vaccinium macrocarpon HOM05D000924 ORTHO05D001209 2.3e-121 439.9 425 55.5
Cc00_g02560 Coffea canephora HOM05D000924 ORTHO05D001209 6.6e-121 438.3 428 55.4
CSS0010952 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 2.5e-120 436.4 425 55.5
Sed0023477 Sechium edule HOM05D000924 ORTHO05D001209 2.5e-120 436.4 426 55.6
CSS0043185 Camellia sinensis var. sinensis HOM05D000924 ORTHO05D001209 3.3e-120 436.0 425 55.5
SalBow7G1805 Salvia bowleyana HOM05D000924 ORTHO05D001209 4.3e-120 435.6 426 54.9
Sc03g0008290 Simmondsia chinensis HOM05D000924 ORTHO05D001209 5.6e-120 435.3 425 57.4
Carub.0008s2181 Capsella rubella HOM05D000924 ORTHO05D001209 7.3e-120 434.9 428 55.1
PGR083G0994 Punica granatum HOM05D000924 ORTHO05D001209 3.6e-119 432.6 428 55.1
SGA_v2.0_scaffold7G04039 Striga asiatica HOM05D000924 ORTHO05D001209 4.8e-119 432.2 425 55.3
Thhalv10003505m.g Eutrema salsugineum HOM05D000924 ORTHO05D001209 5.3e-118 428.7 427 54.8
Hma1.2p1_0060F.1_g033190 Hydrangea macrophylla HOM05D000924 ORTHO05D001209 6.9e-118 428.3 528 47.9
AL8G37790 Arabidopsis lyrata HOM05D000924 ORTHO05D001209 2.0e-117 426.8 428 54.2
CARHR274830 Cardamine hirsuta HOM05D000924 ORTHO05D001209 2.0e-117 426.8 428 55.1
Sp2g24390 Schrenkiella parvula HOM05D000924 ORTHO05D001209 3.4e-117 426.0 427 54.8
arahy.Tifrunner.gnm1.ann1.QJ15ZQ Arachis hypogaea HOM05D000924 ORTHO05D001209 5.8e-117 425.2 426 54.5
A02p41450 Brassica napus HOM05D000924 ORTHO05D001209 9.9e-117 424.5 430 54.7
arahy.Tifrunner.gnm1.ann1.TAYI6X Arachis hypogaea HOM05D000924 ORTHO05D001209 1.3e-116 424.1 425 54.1
BraA02t09087Z Brassica rapa HOM05D000924 ORTHO05D001209 2.9e-116 422.9 430 54.4
C02p61380 Brassica napus HOM05D000924 ORTHO05D001209 3.8e-116 422.5 429 54.1
BolC2t12187H Brassica oleracea HOM05D000924 ORTHO05D001209 6.4e-116 421.8 429 54.3
Eucgr.B00583 Eucalyptus grandis HOM05D000924 ORTHO05D001209 8.4e-116 421.4 431 52.4
Gohir.D12G185001 Gossypium hirsutum HOM05D000924 ORTHO05D001209 1.4e-115 420.6 412 56.8
VMungo1309G1347 Vigna mungo HOM05D000924 ORTHO05D001209 1.4e-115 420.6 425 52.9
Lalb_Chr14g0362841 Lupinus albus HOM05D000924 ORTHO05D001209 1.9e-115 420.2 428 53.7
AT5G61140 Arabidopsis thaliana HOM05D000924 ORTHO05D001209 2.4e-115 419.9 429 53.6
Solyc06g069480.3 Solanum lycopersicum HOM05D000924 ORTHO05D001209 2.4e-115 419.9 425 53.2
DCAR_011555 Daucus carota HOM05D000924 ORTHO05D001209 5.4e-115 418.7 428 54.7
Sopen06g026770 Solanum pennellii HOM05D000924 ORTHO05D001209 7.1e-115 418.3 425 52.9
TPR.G12162 Trifolium pratense HOM05D000924 ORTHO05D001209 7.1e-115 418.3 425 52.9
Phvul.009G192100 Phaseolus vulgaris HOM05D000924 ORTHO05D001209 9.3e-115 417.9 425 52.5
MSTRG.4451 Avicennia marina HOM05D000924 ORTHO05D001209 2.1e-114 416.8 427 52.5
CsaV3_1G005930 Cucumis sativus L. HOM05D000924 ORTHO05D001209 2.1e-114 416.8 429 53.8
CAN.G587.45 Capsicum annuum HOM05D000924 ORTHO05D001209 2.7e-114 416.4 425 52.5
Aa31LG11G2210 Aethionema arabicum HOM05D000924 ORTHO05D001209 4.6e-114 415.6 427 53.4
AUR62008516 Chenopodium quinoa HOM05D000924 ORTHO05D001209 4.6e-114 415.6 425 54.8
Nitab4.5_0001328g0010 Nicotiana tabacum HOM05D000924 ORTHO05D001209 6.0e-114 415.2 430 53.0
ClCG04G011840 Citrullus lanatus HOM05D000924 ORTHO05D001209 4.3e-112 409.1 461 49.7
Migut.D01699 Erythranthe guttata HOM05D000924 ORTHO05D001209 4.3e-112 409.1 429 53.8
Medtr3g025300 Medicago truncatula HOM05D000924 ORTHO05D001209 1.1e-110 404.4 425 50.8
CDE06G1554 Ceratophyllum demersum HOM05D000924 ORTHO05D001209 2.7e-106 389.8 426 48.8
Zm00001eb400270 Zea mays HOM05D000924 ORTHO05D001209 9.0e-102 374.8 427 49.6
Actinidia25776 Actinidia chinensis HOM05D000924 ORTHO05D001209 3.4e-101 372.9 423 51.1
MELO3C002023.2 Cucumis melo HOM05D000924 ORTHO05D001209 6.0e-98 362.1 362 54.1
Oeu031662.3 Olea europaea HOM05D000924 ORTHO05D001209 3.3e-96 356.3 349 55.9
Ca_26749_v3 Cicer arietinum L. HOM05D000924 ORTHO05D001209 3.7e-95 352.8 387 49.4
ATR0064G009 Amborella trichopoda HOM05D000924 ORTHO05D001209 2.6e-93 346.7 373 52.5
FAN08G2399 Fragaria x ananassa HOM05D000924 ORTHO05D001209 3.8e-84 316.2 321 54.2
Peaxi162Scf00013g00069 Petunia axillaris HOM05D000924 ORTHO05D001209 1.9e-83 313.9 314 52.2
HPP92_009485 Vanilla planifolia HOM05D000924 ORTHO05D001209 8.2e-79 298.5 428 43.2
CiPaw.11G052300 Carya illinoinensis HOM05D000924 ORTHO05D001209 6.3e-71 272.3 174 77.6
AagrBONN_evm.TU.Sc2ySwM_228.4663 Anthoceros agrestis HOM05D000924 ORTHO05D001209 6.3e-63 245.7 463 38.7
Pp3c2_9850 Physcomitrium patens HOM05D000924 ORTHO05D001209 1.1e-54 218.4 458 36.2
CBR_g38192 Chara braunii HOM05D000924 ORTHO05D001209 9.8e-48 195.3 456 33.1
Mapoly0046s0099 Marchantia polymorpha HOM05D000924 ORTHO05D001209 1.3e-47 194.9 216 50.9
SMO116G0141 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 2.3e-44 184.1 276 42.8
SMO195G0012 Selaginella moellendorffii HOM05D000924 ORTHO05D001209 6.6e-44 182.6 280 42.1
HanXRQChr11g0333861 Helianthus annuus HOM05D000924 ORTHO05D038057 7.3e-35 152.5 172 48.3
Oeu052476.1 Olea europaea HOM05D000924 ORTHO05D030917 2.3e-20 104.4 120 48.3
CDE04G1372 Ceratophyllum demersum HOM05D000924 ORTHO05D130120 8.9e-17 92.4 90 53.3
PRCOL_00000726 Prasinoderma coloniale HOM05D000924 ORTHO05D001209 1.5e-16 91.7 235 33.2
Actinidia16120 Actinidia chinensis HOM05D000924 ORTHO05D056428 3.9e-12 77.0 50 68.0
Actinidia27219 Actinidia chinensis HOM05D000924 ORTHO05D030917 6.6e-12 76.3 91 48.4


User provided reference genes

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