Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G01245 Aquilegia oxysepala HOM05D003289 ORTHO05D018396 1.3e-100 369.8 190 100.0
Aqoxy3G01424 Aquilegia oxysepala HOM05D003289 ORTHO05D018396 4.7e-95 351.3 199 92.5
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 4.9e-68 261.5 214 66.4
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 8.4e-44 181.0 202 51.5
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 3.9e-41 172.2 205 47.3
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 3.3e-40 169.1 204 49.0
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 4.8e-39 165.2 207 49.8
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 1.4e-38 163.7 204 47.1
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 9.0e-38 161.0 179 50.3
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 3.4e-37 159.1 208 47.1
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 1.0e-36 157.5 201 49.3
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 1.3e-36 157.1 207 46.4
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 1.7e-36 156.8 201 48.8
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 1.7e-36 156.8 201 46.3
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 6.5e-36 154.8 199 48.2
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 1.4e-35 153.7 210 44.8
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 1.4e-35 153.7 206 48.1
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 1.9e-35 153.3 194 45.9
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 2.5e-35 152.9 206 43.7
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 3.2e-35 152.5 203 44.8
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 5.5e-35 151.8 207 43.5
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 9.3e-35 151.0 206 45.6
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 9.3e-35 151.0 207 44.0
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 1.2e-34 150.6 181 47.0
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 1.2e-34 150.6 188 46.3
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 1.6e-34 150.2 174 49.4
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 2.7e-34 149.4 203 44.8
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 2.7e-34 149.4 197 47.2
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 3.5e-34 149.1 182 47.8
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 4.6e-34 148.7 178 49.4
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 4.6e-34 148.7 174 48.9
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 4.6e-34 148.7 205 45.4
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 4.6e-34 148.7 214 44.9
Solyc11g067140.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 4.6e-34 148.7 180 47.2
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 6.0e-34 148.3 198 45.5
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 1.3e-33 147.1 197 45.2
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 1.3e-33 147.1 206 45.6
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 6.7e-33 144.8 205 44.4
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 6.7e-33 144.8 171 50.3
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 8.7e-33 144.4 200 45.5
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 8.7e-33 144.4 190 44.7
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 8.7e-33 144.4 197 46.2
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 8.7e-33 144.4 197 46.2
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.1e-32 144.1 171 49.1
QL02p000117 Quercus lobata HOM05D003289 ORTHO05D004594 1.9e-32 143.3 206 44.7
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 2.5e-32 142.9 213 43.7
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 7.4e-32 141.4 170 48.8
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 7.4e-32 141.4 207 44.9
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 9.6e-32 141.0 183 44.8
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 1.3e-31 140.6 208 43.3
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 2.1e-31 139.8 172 45.3
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.8e-31 139.4 178 46.6
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 2.8e-31 139.4 190 47.4
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 4.8e-31 138.7 178 45.5
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 6.3e-31 138.3 200 42.5
HanXRQChr09g0249471 Helianthus annuus HOM05D003289 ORTHO05D004594 1.1e-30 137.5 168 50.6
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 1.8e-30 136.7 170 48.8
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 2.4e-30 136.3 173 47.4
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 5.3e-30 135.2 169 47.3
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 9.0e-30 134.4 169 47.9
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 9.0e-30 134.4 213 43.2
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 9.0e-30 134.4 176 42.0
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 1.2e-29 134.0 190 43.2
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 1.5e-29 133.7 197 43.7
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 2.0e-29 133.3 178 44.4
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 2.0e-29 133.3 194 43.8
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 4.5e-29 132.1 170 45.3
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 4.5e-29 132.1 198 39.4
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 5.9e-29 131.7 203 40.9
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 7.6e-29 131.3 179 45.3
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 1.0e-28 131.0 177 44.6
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 1.3e-28 130.6 172 45.9
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.3e-28 130.6 200 43.0
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 1.3e-28 130.6 171 45.0
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 2.9e-28 129.4 178 44.4
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 8.4e-28 127.9 179 44.1
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 8.4e-28 127.9 197 43.7
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 1.4e-27 127.1 211 40.3
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 1.4e-27 127.1 173 42.8
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 2.5e-27 126.3 195 43.6
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 2.5e-27 126.3 193 43.5
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 4.2e-27 125.6 209 37.8
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 7.2e-27 124.8 168 45.8
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 2.1e-26 123.2 215 39.1
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 2.1e-26 123.2 215 39.1
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 2.7e-26 122.9 178 41.6
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 7.9e-26 121.3 158 45.6
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 1.8e-25 120.2 208 36.5
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 8.7e-25 117.9 251 34.7
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 1.1e-24 117.5 93 65.6
Peaxi162Scf00544g00919 Petunia axillaris HOM05D003289 ORTHO05D004594 1.6e-23 113.6 93 63.4
Nitab4.5_0003532g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 3.7e-23 112.5 93 62.4
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 3.7e-23 112.5 165 41.2
CDE02G3272 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 4.8e-23 112.1 93 60.2
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 1.8e-22 110.2 177 39.5
Nitab4.5_0004240g0020 Nicotiana tabacum HOM05D003289 ORTHO05D004594 1.8e-22 110.2 93 61.3
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 4.1e-22 109.0 205 40.5
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 6.9e-22 108.2 197 39.6
SGA_v2.0_scaffold424G51466 Striga asiatica HOM05D003289 ORTHO05D018396 1.2e-21 107.5 93 59.1
COL.COLO4_06999 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.7e-20 103.6 180 43.3
MBI18_g03519_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 1.9e-19 100.1 132 45.5
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 4.2e-19 99.0 181 37.0
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 9.4e-19 97.8 268 28.4
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 4.6e-18 95.5 155 36.1
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 6.3e-15 85.1 191 33.0
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 1.4e-14 84.0 191 32.5
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 3.1e-14 82.8 300 25.3
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 2.6e-13 79.7 169 34.3
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 2.6e-13 79.7 169 34.3
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 4.5e-13 79.0 169 34.9
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 4.5e-13 79.0 169 34.9
MBI06_g41845_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 1.0e-12 77.8 140 35.7
CAN.G1177.9 Capsicum annuum HOM05D003289 ORTHO05D004594 2.2e-12 76.6 101 45.5
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 7.2e-11 71.6 140 33.6
Nitab4.5_0003532g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 3.1e-06 56.2 63 47.6
HPP92_025208 Vanilla planifolia HOM05D003289 ORTHO05D028359 9.1e-06 54.7 144 31.2


User provided reference genes

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