Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02785 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 2.5e-50 201.8 102 100.0
Aqoxy3G02968 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 3.7e-38 161.4 87 96.6
Eucgr.H02616 Eucalyptus grandis HOM05D002725 ORTHO05D003279 3.1e-37 158.3 87 92.0
CANSAT56G0776 Cannabis sativa HOM05D002725 ORTHO05D003279 5.3e-37 157.5 87 92.0
SalBow2G2496 Salvia bowleyana HOM05D002725 ORTHO05D003279 7.0e-37 157.1 87 90.8
GSVIVG01020223001 Vitis vinifera HOM05D002725 ORTHO05D003279 7.0e-37 157.1 87 90.8
CDE11G0115 Ceratophyllum demersum HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 92.0
Duzib106G0624 Durio zibethinus HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 90.8
Duzib268G0345 Durio zibethinus HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 90.8
Gohir.A03G140600 Gossypium hirsutum HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 92.0
Gohir.D02G163400 Gossypium hirsutum HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 92.0
Gorai.005G183400 Gossypium raimondii HOM05D002725 ORTHO05D003279 9.1e-37 156.8 87 92.0
Glyma.16G063000 Glycine max HOM05D002725 ORTHO05D003279 1.2e-36 156.4 87 90.8
Glyma.19G082500 Glycine max HOM05D002725 ORTHO05D003279 1.2e-36 156.4 87 90.8
Mapoly0042s0037 Marchantia polymorpha HOM05D002725 ORTHO05D003279 1.2e-36 156.4 87 92.0
Dinv24871 Davidia involucrata HOM05D002725 ORTHO05D003279 1.6e-36 156.0 87 90.8
Manes.12G030200 Manihot esculenta HOM05D002725 ORTHO05D003279 2.0e-36 155.6 87 90.8
Phvul.003G041300 Phaseolus vulgaris HOM05D002725 ORTHO05D003279 2.0e-36 155.6 87 90.8
Potri.002G176000 Populus trichocarpa HOM05D002725 ORTHO05D003279 2.0e-36 155.6 87 90.8
Actinidia01708 Actinidia chinensis HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
CiPaw.14G100600 Carya illinoinensis HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 90.8
Ca_06608_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
Hma1.2p1_0867F.1_g230300 Hydrangea macrophylla HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
MD02G1186000 Malus domestica HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
Prupe.5G061600 Prunus persica HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
Prupe.6G220500 Prunus persica HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
VMungo0464G0614 Vigna mungo HOM05D002725 ORTHO05D003279 2.7e-36 155.2 87 89.7
Pp3c5_26190 Physcomitrium patens HOM05D002725 ORTHO05D003279 3.5e-36 154.8 87 90.8
CiPaw.05G149700 Carya illinoinensis HOM05D002725 ORTHO05D003279 4.5e-36 154.5 87 89.7
Lalb_Chr22g0360531 Lupinus albus HOM05D002725 ORTHO05D003279 4.5e-36 154.5 87 89.7
Psat3g161280 Pisum sativum HOM05D002725 ORTHO05D003279 4.5e-36 154.5 87 89.7
ATR0680G011 Amborella trichopoda HOM05D002725 ORTHO05D003279 5.9e-36 154.1 87 89.7
arahy.Tifrunner.gnm1.ann1.D69TB6 Arachis hypogaea HOM05D002725 ORTHO05D003279 7.7e-36 153.7 87 90.8
AUR62005361 Chenopodium quinoa HOM05D002725 ORTHO05D003279 7.7e-36 153.7 87 90.8
Ca_25613_v3 Cicer arietinum L. HOM05D002725 ORTHO05D003279 7.7e-36 153.7 87 87.4
arahy.Tifrunner.gnm1.ann1.JTBU3D Arachis hypogaea HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 89.7
arahy.Tifrunner.gnm1.ann1.JXF13M Arachis hypogaea HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 89.7
arahy.Tifrunner.gnm1.ann1.LYET28 Arachis hypogaea HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 89.7
Haze_12164 Corylus avellana HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 88.5
HanXRQChr08g0234721 Helianthus annuus HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 88.5
Nn3g16917 Nelumbo nucifera HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 88.5
Rhsim12G0121500 Rhododendron simsii HOM05D002725 ORTHO05D003279 1.0e-35 153.3 87 87.4
Ciclev10031363m.g Citrus clementina HOM05D002725 ORTHO05D003279 1.3e-35 152.9 87 89.7
Sabra02G0137700 Salix brachista HOM05D002725 ORTHO05D003279 1.3e-35 152.9 87 89.7
PGR119G1015 Punica granatum HOM05D002725 ORTHO05D003279 1.7e-35 152.5 87 88.5
AUR62014016 Chenopodium quinoa HOM05D002725 ORTHO05D003279 2.2e-35 152.1 87 89.7
QL03p061701 Quercus lobata HOM05D002725 ORTHO05D003279 2.2e-35 152.1 87 87.4
TAR629G1020 Trochodendron aralioides HOM05D002725 ORTHO05D003279 2.2e-35 152.1 94 84.0
EL10Ac6g13658 Beta vulgaris HOM05D002725 ORTHO05D003279 2.9e-35 151.8 87 88.5
SHI27131 Sapria himalayana HOM05D002725 ORTHO05D003279 2.9e-35 151.8 87 87.4
AagrBONN_evm.TU.Sc2ySwM_344.2036 Anthoceros agrestis HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 87.4
AagrBONN_evm.TU.Sc2ySwM_368.3392 Anthoceros agrestis HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 87.4
ClCG05G025230 Citrullus lanatus HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 88.5
MELO3C012005.2 Cucumis melo HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 88.5
CsaV3_5G031650 Cucumis sativus L. HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 88.5
unitig_22.g6933 Utricularia gibba HOM05D002725 ORTHO05D003279 3.8e-35 151.4 87 87.4
Cpa.g.sc824.3 Carica papaya HOM05D002725 ORTHO05D003279 5.0e-35 151.0 87 89.7
DCAR_031095 Daucus carota HOM05D002725 ORTHO05D003279 5.0e-35 151.0 87 89.7
Migut.K01129 Erythranthe guttata HOM05D002725 ORTHO05D003279 8.5e-35 150.2 87 87.4
TPR.G9070 Trifolium pratense HOM05D002725 ORTHO05D003279 8.5e-35 150.2 87 86.2
Lsat_1_v5_gn_1_10560 Lactuca sativa HOM05D002725 ORTHO05D003279 1.1e-34 149.8 87 87.4
Lsat_1_v5_gn_8_158161 Lactuca sativa HOM05D002725 ORTHO05D003279 1.1e-34 149.8 87 87.4
Phvul.008G149300 Phaseolus vulgaris HOM05D002725 ORTHO05D003279 1.1e-34 149.8 87 87.4
FvH4_1g17710 Fragaria vesca HOM05D002725 ORTHO05D003279 1.5e-34 149.4 88 87.5
FAN19G1008 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.5e-34 149.4 88 87.5
FAN23G0685 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.5e-34 149.4 88 87.5
FAN26G2216 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.5e-34 149.4 88 87.5
Ah.02g129870 Amaranthus hybridus HOM05D002725 ORTHO05D003279 1.9e-34 149.1 86 88.4
ECA233G4284 Erigeron canadensis HOM05D002725 ORTHO05D003279 2.5e-34 148.7 87 85.1
Sed0004453 Sechium edule HOM05D002725 ORTHO05D003279 2.5e-34 148.7 87 86.2
Cc11_g14540 Coffea canephora HOM05D002725 ORTHO05D003279 3.2e-34 148.3 86 88.4
MSTRG.7887 Avicennia marina HOM05D002725 ORTHO05D003279 1.2e-33 146.4 87 86.2
TPR.G37028 Trifolium pratense HOM05D002725 ORTHO05D003279 2.1e-33 145.6 87 85.1
CBR_g50945 Chara braunii HOM05D002725 ORTHO05D003279 6.1e-33 144.1 87 82.8
MD15G1297400 Malus domestica HOM05D002725 ORTHO05D003279 2.3e-32 142.1 86 83.7
TPR.G10571 Trifolium pratense HOM05D002725 ORTHO05D003279 3.0e-32 141.7 87 82.8
THA.LOC104812782 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 8.8e-32 140.2 89 84.3
SMO139G0072 Selaginella moellendorffii HOM05D002725 ORTHO05D003279 2.0e-31 139.0 87 82.8
DCAR_025614 Daucus carota HOM05D002725 ORTHO05D003279 3.4e-31 138.3 87 83.9
SGA_v2.0_scaffold165G38254 Striga asiatica HOM05D002725 ORTHO05D003279 3.4e-31 138.3 84 83.3
THA.LOC104816751 Tarenaya hassleriana HOM05D002725 ORTHO05D003279 3.4e-31 138.3 89 83.1
COL.COLO4_36975 Corchorus olitorius HOM05D002725 ORTHO05D003279 7.5e-31 137.1 87 81.6
Nitab4.5_0001381g0050 Nicotiana tabacum HOM05D002725 ORTHO05D003279 6.3e-30 134.0 87 79.3
Nitab4.5_0002289g0110 Nicotiana tabacum HOM05D002725 ORTHO05D003279 6.3e-30 134.0 87 79.3
CAN.G1178.23 Capsicum annuum HOM05D002725 ORTHO05D003279 8.3e-30 133.7 87 78.2
Peaxi162Scf00301g00128 Petunia axillaris HOM05D002725 ORTHO05D003279 8.3e-30 133.7 87 78.2
Potri.014G102800 Populus trichocarpa HOM05D002725 ORTHO05D003279 8.3e-30 133.7 88 80.7
Solyc08g078430.4 Solanum lycopersicum HOM05D002725 ORTHO05D003279 8.3e-30 133.7 87 78.2
Sopen08g026920 Solanum pennellii HOM05D002725 ORTHO05D003279 8.3e-30 133.7 87 78.2
PGSC0003DMG400004771 Solanum tuberosum HOM05D002725 ORTHO05D003279 8.3e-30 133.7 87 78.2
Manes.13G031300 Manihot esculenta HOM05D002725 ORTHO05D003279 1.1e-29 133.3 87 79.3
MBI10_g36211_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 1.8e-29 132.5 87 80.5
MBI18_g25085_MAGBIO Magnolia biondii HOM05D002725 ORTHO05D003279 1.8e-29 132.5 87 80.5
Aa31LG2G10130 Aethionema arabicum HOM05D002725 ORTHO05D003279 2.4e-29 132.1 94 76.6
Medtr7g037560 Medicago truncatula HOM05D002725 ORTHO05D003279 2.4e-29 132.1 87 78.2
FAN28G0598 Fragaria x ananassa HOM05D002725 ORTHO05D003279 3.1e-29 131.7 88 78.4
RcHm_v2.0_Chr2g0108041 Rosa chinensis HOM05D002725 ORTHO05D003279 3.1e-29 131.7 88 78.4
AL2G16480 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 9.1e-29 130.2 94 74.5
Carub.0002s0508 Capsella rubella HOM05D002725 ORTHO05D003279 9.1e-29 130.2 94 74.5
CARHR292010 Cardamine hirsuta HOM05D002725 ORTHO05D003279 9.1e-29 130.2 94 74.5
Sp2g04490 Schrenkiella parvula HOM05D002725 ORTHO05D003279 1.6e-28 129.4 94 74.5
CAN.G1178.19 Capsicum annuum HOM05D002725 ORTHO05D003279 2.7e-28 128.6 87 75.9
AT1G60170 Arabidopsis thaliana HOM05D002725 ORTHO05D003279 3.5e-28 128.3 94 73.4
Thhalv10023432m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 3.5e-28 128.3 89 77.5
Zm00001eb074440 Zea mays HOM05D002725 ORTHO05D003279 4.5e-28 127.9 87 77.0
PSO063G5148 Papaver somniferum HOM05D002725 ORTHO05D003279 1.0e-27 126.7 88 77.3
PSO832G2366 Papaver somniferum HOM05D002725 ORTHO05D003279 1.0e-27 126.7 88 77.3
BcaC06g31807 Brassica carinata HOM05D002725 ORTHO05D003279 1.3e-27 126.3 94 71.3
PSO832G3550 Papaver somniferum HOM05D002725 ORTHO05D003279 1.7e-27 125.9 86 75.6
COL.COLO4_32664 Corchorus olitorius HOM05D002725 ORTHO05D003279 2.9e-27 125.2 91 72.5
Peaxi162Scf01086g00013 Petunia axillaris HOM05D002725 ORTHO05D003279 2.9e-27 125.2 87 78.2
HPP92_018031 Vanilla planifolia HOM05D002725 ORTHO05D003279 3.8e-27 124.8 87 74.7
BcaB04g20253 Brassica carinata HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
BcaC02g10686 Brassica carinata HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
BcaC09g49421 Brassica carinata HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
A01p29130 Brassica napus HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
C01p36870 Brassica napus HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
C05p51290 Brassica napus HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
BolC1t03648H Brassica oleracea HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
BolC4t24141H Brassica oleracea HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
BraA01t02981Z Brassica rapa HOM05D002725 ORTHO05D003279 5.0e-27 124.4 94 70.2
Hund25340 Selenicereus undatus HOM05D002725 ORTHO05D003279 6.5e-27 124.0 87 75.9
Os02g0730100 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 8.6e-27 123.6 84 77.4
Lj1g0003905 Lotus japonicus HOM05D002725 ORTHO05D003279 1.6e-25 119.4 87 73.6
Actinidia08169 Actinidia chinensis HOM05D002725 ORTHO05D003279 4.7e-25 117.9 87 73.6
TWI75G1526 Tripterygium wilfordii HOM05D002725 ORTHO05D003279 1.4e-24 116.3 87 71.3
Thecc.02G244300 Theobroma cacao HOM05D002725 ORTHO05D003279 1.8e-24 115.9 87 71.3
CSS0011985 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 2.6e-23 112.1 87 69.0
CSS0030976 Camellia sinensis var. sinensis HOM05D002725 ORTHO05D003279 2.6e-23 112.1 87 69.0
Os04g0555400 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 1.7e-22 109.4 87 67.8
Os07g0141600 Oryza sativa ssp. japonica HOM05D002725 ORTHO05D003279 2.8e-22 108.6 87 69.0
DCAR_027104 Daucus carota HOM05D002725 ORTHO05D003279 3.7e-22 108.2 87 70.1
C04p26660 Brassica napus HOM05D002725 ORTHO05D003279 8.3e-22 107.1 85 67.1
PGSC0003DMG400019262 Solanum tuberosum HOM05D002725 ORTHO05D003279 8.3e-22 107.1 89 68.5
Nitab4.5_0001219g0140 Nicotiana tabacum HOM05D002725 ORTHO05D003279 1.1e-21 106.7 86 72.1
BcaC05g25456 Brassica carinata HOM05D002725 ORTHO05D003279 1.4e-21 106.3 99 63.6
C05p13400 Brassica napus HOM05D002725 ORTHO05D003279 1.4e-21 106.3 99 63.6
BolC5t30077H Brassica oleracea HOM05D002725 ORTHO05D003279 1.4e-21 106.3 99 63.6
vmacro16261 Vaccinium macrocarpon HOM05D002725 ORTHO05D003279 2.4e-21 105.5 84 69.0
AL3G44040 Arabidopsis lyrata HOM05D002725 ORTHO05D003279 7.0e-21 104.0 93 66.7
BcaC05g25461 Brassica carinata HOM05D002725 ORTHO05D003279 7.0e-21 104.0 107 59.8
Thhalv10009759m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 3.5e-20 101.7 96 63.5
A06p11270 Brassica napus HOM05D002725 ORTHO05D003279 7.8e-20 100.5 99 62.6
BraA06t24307Z Brassica rapa HOM05D002725 ORTHO05D003279 7.8e-20 100.5 99 62.6
Aqoxy1G03248 Aquilegia oxysepala HOM05D002725 ORTHO05D003279 1.0e-19 100.1 87 62.1
SGA_v2.0_scaffold36G14409 Striga asiatica HOM05D002725 ORTHO05D003279 6.6e-19 97.4 61 83.6
Nitab4.5_0000368g0220 Nicotiana tabacum HOM05D002725 ORTHO05D003279 1.1e-18 96.7 79 67.1
Solyc07g064070.3 Solanum lycopersicum HOM05D002725 ORTHO05D003279 2.5e-18 95.5 89 61.8
Sopen07g032210 Solanum pennellii HOM05D002725 ORTHO05D003279 1.2e-17 93.2 87 62.1
Sopen01g038100 Solanum pennellii HOM05D002725 ORTHO05D003279 6.1e-17 90.9 88 59.1
CAN.G78.53 Capsicum annuum HOM05D002725 ORTHO05D003279 8.0e-17 90.5 88 60.2
PGSC0003DMG400000023 Solanum tuberosum HOM05D002725 ORTHO05D003279 8.0e-17 90.5 88 60.2
Cre10.g424850 Chlamydomonas reinhardtii HOM05D002725 ORTHO05D003279 1.0e-16 90.1 89 56.2
CAN.G337.150 Capsicum annuum HOM05D002725 ORTHO05D003279 4.0e-16 88.2 68 70.6
Duzib248G0107 Durio zibethinus HOM05D002725 ORTHO05D003279 6.8e-16 87.4 59 74.6
Migut.N01594 Erythranthe guttata HOM05D002725 ORTHO05D003279 1.5e-15 86.3 83 60.2
FAN18G3093 Fragaria x ananassa HOM05D002725 ORTHO05D003279 1.5e-15 86.3 80 66.2
Thhalv10003005m.g Eutrema salsugineum HOM05D002725 ORTHO05D003279 4.4e-15 84.7 89 59.6
AUR62024795 Chenopodium quinoa HOM05D002725 ORTHO05D003279 1.8e-13 79.3 65 63.1
ECA233G0293 Erigeron canadensis HOM05D002725 ORTHO05D003279 2.4e-13 79.0 63 68.3
TAR371G0609 Trochodendron aralioides HOM05D002725 ORTHO05D003279 2.4e-13 79.0 38 97.4
FAN13G3129 Fragaria x ananassa HOM05D002725 ORTHO05D003279 9.2e-13 77.0 39 92.3
Sed0011360 Sechium edule HOM05D002725 ORTHO05D003279 1.7e-11 72.8 40 85.0
MCO14G503 Micromonas commoda HOM05D002725 ORTHO05D003279 3.9e-11 71.6 93 49.5
Rhsim12G0147600 Rhododendron simsii HOM05D002725 ORTHO05D003052 6.2e-09 64.3 66 50.0
QL06p007601 Quercus lobata HOM05D002725 ORTHO05D003279 8.0e-09 63.9 41 70.7
Rhsim02G0180300 Rhododendron simsii HOM05D002725 ORTHO05D003279 1.1e-08 63.5 35 80.0
Haze_26190 Corylus avellana HOM05D002725 ORTHO05D003279 1.4e-08 63.2 96 43.8
GSVIVG01037241001 Vitis vinifera HOM05D002725 ORTHO05D438117 3.1e-08 62.0 49 65.3
PRCOL_00005735 Prasinoderma coloniale HOM05D002725 ORTHO05D003279 4.0e-08 61.6 94 44.7
Sc14g0008580 Simmondsia chinensis HOM05D002725 ORTHO05D003279 2.6e-07 58.9 28 100.0
Oeu001743.1 Olea europaea HOM05D002725 ORTHO05D003279 3.4e-07 58.5 28 96.4
Solyc01g094300.1 Solanum lycopersicum HOM05D002725 ORTHO05D003279 3.4e-07 58.5 63 60.3
FAN08G0728 Fragaria x ananassa HOM05D002725 ORTHO05D003279 6.4e-06 54.3 44 68.2


User provided reference genes

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