Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01424 Aquilegia oxysepala HOM05D003289 ORTHO05D018396 2.7e-109 398.7 203 100.0
Aqoxy4G01245 Aquilegia oxysepala HOM05D003289 ORTHO05D018396 1.0e-95 353.6 199 92.5
Aqoxy2G01337 Aquilegia oxysepala HOM05D003289 ORTHO05D004594 5.8e-75 284.6 214 68.2
TAR636G3131 Trochodendron aralioides HOM05D003289 ORTHO05D004594 4.9e-50 201.8 202 54.0
Nn2g14071 Nelumbo nucifera HOM05D003289 ORTHO05D004594 1.7e-47 193.4 205 49.8
Rhsim13G0107600 Rhododendron simsii HOM05D003289 ORTHO05D004594 2.5e-46 189.5 204 51.5
Oeu031488.2 Olea europaea HOM05D003289 ORTHO05D004594 1.1e-44 184.1 187 52.4
vmacro03295 Vaccinium macrocarpon HOM05D003289 ORTHO05D004594 1.4e-44 183.7 204 49.5
CSS0049320 Camellia sinensis var. sinensis HOM05D003289 ORTHO05D004594 2.4e-44 183.0 207 52.2
MSTRG.17714 Avicennia marina HOM05D003289 ORTHO05D004594 5.3e-44 181.8 201 52.7
SalBow3G0618 Salvia bowleyana HOM05D003289 ORTHO05D004594 5.3e-44 181.8 201 53.2
Migut.N02501 Erythranthe guttata HOM05D003289 ORTHO05D004594 3.4e-43 179.1 206 47.6
Haze_23425 Corylus avellana HOM05D003289 ORTHO05D004594 4.5e-43 178.7 208 49.0
Lj2C988G5 Lonicera japonica HOM05D003289 ORTHO05D004594 3.8e-42 175.6 204 49.5
Actinidia07230 Actinidia chinensis HOM05D003289 ORTHO05D004594 8.4e-42 174.5 194 49.0
DCAR_012181 Daucus carota HOM05D003289 ORTHO05D004594 8.4e-42 174.5 201 48.3
CAN.G644.7 Capsicum annuum HOM05D003289 ORTHO05D004594 1.9e-41 173.3 210 47.1
HPP92_025278 Vanilla planifolia HOM05D003289 ORTHO05D004594 1.9e-41 173.3 199 49.2
CiPaw.13G138900 Carya illinoinensis HOM05D003289 ORTHO05D004594 3.2e-41 172.6 206 50.0
Potri.004G185700 Populus trichocarpa HOM05D003289 ORTHO05D004594 3.2e-41 172.6 207 45.9
Sabra04G0125000 Salix brachista HOM05D003289 ORTHO05D004594 5.5e-41 171.8 207 46.4
PSO384G0460 Papaver somniferum HOM05D003289 ORTHO05D004594 7.1e-41 171.4 174 51.7
Cc01_g09530 Coffea canephora HOM05D003289 ORTHO05D004594 9.3e-41 171.0 181 49.7
PSO425G0048 Papaver somniferum HOM05D003289 ORTHO05D004594 1.6e-40 170.2 174 51.1
THA.LOC104826411 Tarenaya hassleriana HOM05D003289 ORTHO05D004594 1.6e-40 170.2 208 43.3
Ciclev10027662m.g Citrus clementina HOM05D003289 ORTHO05D004594 2.7e-40 169.5 207 46.9
Manes.04G006100 Manihot esculenta HOM05D003289 ORTHO05D004594 2.7e-40 169.5 204 47.1
Sopen11g026820 Solanum pennellii HOM05D003289 ORTHO05D004594 3.5e-40 169.1 203 47.3
arahy.Tifrunner.gnm1.ann1.B2Y78K Arachis hypogaea HOM05D003289 ORTHO05D004594 6.0e-40 168.3 198 47.5
Thecc.09G288000 Theobroma cacao HOM05D003289 ORTHO05D004594 6.0e-40 168.3 197 49.2
GSVIVG01031365001 Vitis vinifera HOM05D003289 ORTHO05D004594 7.9e-40 167.9 182 50.0
HanXRQChr05g0145141 Helianthus annuus HOM05D003289 ORTHO05D004594 1.0e-39 167.5 174 51.7
Solyc11g067140.2 Solanum lycopersicum HOM05D003289 ORTHO05D004594 1.8e-39 166.8 180 49.4
Thhalv10006524m.g Eutrema salsugineum HOM05D003289 ORTHO05D004594 2.3e-39 166.4 173 52.6
Gohir.A05G082500 Gossypium hirsutum HOM05D003289 ORTHO05D004594 3.0e-39 166.0 198 47.5
Sp1g06890 Schrenkiella parvula HOM05D003289 ORTHO05D004594 3.9e-39 165.6 214 46.3
arahy.Tifrunner.gnm1.ann1.F25EMM Arachis hypogaea HOM05D003289 ORTHO05D004594 8.7e-39 164.5 200 47.5
Duzib168G1226 Durio zibethinus HOM05D003289 ORTHO05D004594 1.1e-38 164.1 205 46.3
EL10Ac7g15792 Beta vulgaris HOM05D003289 ORTHO05D004594 1.5e-38 163.7 171 51.5
CANSAT54G1671 Cannabis sativa HOM05D003289 ORTHO05D004594 1.5e-38 163.7 207 43.5
Cpa.g.sc32.131 Carica papaya HOM05D003289 ORTHO05D004594 1.9e-38 163.3 213 46.0
AUR62039240 Chenopodium quinoa HOM05D003289 ORTHO05D004594 1.9e-38 163.3 205 47.3
QL01p013239 Quercus lobata HOM05D003289 ORTHO05D004594 1.9e-38 163.3 207 47.8
Lsat_1_v5_gn_6_39380 Lactuca sativa HOM05D003289 ORTHO05D004594 2.5e-38 162.9 183 48.1
AUR62009793 Chenopodium quinoa HOM05D003289 ORTHO05D004594 3.3e-38 162.5 170 52.4
Carub.0001s0761 Capsella rubella HOM05D003289 ORTHO05D004594 4.3e-38 162.2 178 49.4
Eucgr.B03882 Eucalyptus grandis HOM05D003289 ORTHO05D004594 5.6e-38 161.8 171 52.0
Gohir.D05G085400 Gossypium hirsutum HOM05D003289 ORTHO05D004594 9.6e-38 161.0 198 48.0
Gorai.009G087200 Gossypium raimondii HOM05D003289 ORTHO05D004594 9.6e-38 161.0 198 48.0
Lsat_1_v5_gn_6_39840 Lactuca sativa HOM05D003289 ORTHO05D004594 9.6e-38 161.0 172 48.8
Lalb_Chr19g0136661 Lupinus albus HOM05D003289 ORTHO05D004594 9.6e-38 161.0 190 49.5
Lj3g0000987 Lotus japonicus HOM05D003289 ORTHO05D004594 2.1e-37 159.8 209 46.4
ECA233G3796 Erigeron canadensis HOM05D003289 ORTHO05D004594 2.8e-37 159.5 169 50.3
QL02p000117 Quercus lobata HOM05D003289 ORTHO05D004594 2.8e-37 159.5 207 46.9
AL1G18660 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 3.7e-37 159.1 178 48.9
Phvul.011G091900 Phaseolus vulgaris HOM05D003289 ORTHO05D004594 1.8e-36 156.8 190 45.8
HanXRQChr09g0249471 Helianthus annuus HOM05D003289 ORTHO05D004594 2.4e-36 156.4 168 53.0
AT1G08260 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 3.1e-36 156.0 169 50.3
CARHR008100 Cardamine hirsuta HOM05D003289 ORTHO05D004594 9.0e-36 154.5 169 50.9
Hund20868 Selenicereus undatus HOM05D003289 ORTHO05D004594 1.2e-35 154.1 176 44.3
Medtr4g054980 Medicago truncatula HOM05D003289 ORTHO05D004594 2.0e-35 153.3 189 46.0
CsaV3_6G014890 Cucumis sativus L. HOM05D003289 ORTHO05D004594 2.6e-35 152.9 173 48.6
Glyma.11G237700 Glycine max HOM05D003289 ORTHO05D004594 2.6e-35 152.9 179 47.5
Sed0008797 Sechium edule HOM05D003289 ORTHO05D004594 5.8e-35 151.8 206 43.2
Sc21g0007220 Simmondsia chinensis HOM05D003289 ORTHO05D004594 5.8e-35 151.8 170 50.0
Zm00001eb241860 Zea mays HOM05D003289 ORTHO05D004594 1.0e-34 151.0 198 41.4
AL4G20650 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.3e-34 150.6 178 46.6
BolC5t29391H Brassica oleracea HOM05D003289 ORTHO05D004594 1.3e-34 150.6 172 49.4
Ca_19261_v3 Cicer arietinum L. HOM05D003289 ORTHO05D004594 1.7e-34 150.2 170 50.6
VMungo1127G1826 Vigna mungo HOM05D003289 ORTHO05D004594 1.7e-34 150.2 171 47.4
Prupe.6G124200 Prunus persica HOM05D003289 ORTHO05D004594 2.2e-34 149.8 212 43.9
AT2G27120 Arabidopsis thaliana HOM05D003289 ORTHO05D004594 6.5e-34 148.3 177 46.9
MELO3C021434.2 Cucumis melo HOM05D003289 ORTHO05D004594 6.5e-34 148.3 170 46.5
TPR.G15595 Trifolium pratense HOM05D003289 ORTHO05D004594 6.5e-34 148.3 193 46.1
ClCG02G022050 Citrullus lanatus HOM05D003289 ORTHO05D004594 3.2e-33 146.0 178 45.5
Psat7g189880 Pisum sativum HOM05D003289 ORTHO05D004594 3.2e-33 146.0 192 47.4
ATR0820G092 Amborella trichopoda HOM05D003289 ORTHO05D004594 4.2e-33 145.6 195 45.6
Atru.chr3.3336 Acer truncatum HOM05D003289 ORTHO05D004594 5.5e-33 145.2 211 41.7
PGR102G2277 Punica granatum HOM05D003289 ORTHO05D004594 5.5e-33 145.2 203 40.9
ClCG09G020580 Citrullus lanatus HOM05D003289 ORTHO05D004594 9.3e-33 144.4 207 42.5
unitig_22.g6642 Utricularia gibba HOM05D003289 ORTHO05D004594 3.5e-32 142.5 173 45.1
MELO3C002892.2 Cucumis melo HOM05D003289 ORTHO05D004594 1.0e-31 141.0 168 47.0
AL4G20810 Arabidopsis lyrata HOM05D003289 ORTHO05D004594 1.8e-31 140.2 158 48.7
MD03G1139200 Malus domestica HOM05D003289 ORTHO05D004594 1.8e-31 140.2 215 40.5
SEGI_26591 Sequoiadendron giganteum HOM05D003289 ORTHO05D004594 2.3e-31 139.8 209 39.2
RcHm_v2.0_Chr5g0054631 Rosa chinensis HOM05D003289 ORTHO05D004594 3.9e-31 139.0 209 38.3
arahy.Tifrunner.gnm1.ann1.U78W58 Arachis hypogaea HOM05D003289 ORTHO05D004594 8.7e-31 137.9 251 36.3
SGA_v2.0_scaffold102G29919 Striga asiatica HOM05D003289 ORTHO05D004594 3.3e-30 136.0 93 71.0
MD11G1160700 Malus domestica HOM05D003289 ORTHO05D004594 4.3e-30 135.6 213 39.4
Peaxi162Scf00544g00919 Petunia axillaris HOM05D003289 ORTHO05D004594 2.1e-29 133.3 93 69.9
CDE02G3272 Ceratophyllum demersum HOM05D003289 ORTHO05D004594 3.7e-29 132.5 93 65.6
FvH4_3g29570 Fragaria vesca HOM05D003289 ORTHO05D004594 4.8e-29 132.1 208 37.5
Nitab4.5_0003532g0050 Nicotiana tabacum HOM05D003289 ORTHO05D004594 4.8e-29 132.1 93 68.8
Nitab4.5_0004240g0020 Nicotiana tabacum HOM05D003289 ORTHO05D004594 2.4e-28 129.8 93 67.7
SHI18830 Sapria himalayana HOM05D003289 ORTHO05D004594 2.4e-28 129.8 165 43.0
SGA_v2.0_scaffold424G51466 Striga asiatica HOM05D003289 ORTHO05D018396 3.4e-27 125.9 93 64.5
COL.COLO4_19937 Corchorus olitorius HOM05D003289 ORTHO05D004594 4.5e-27 125.6 205 41.5
Aa31LG2G19310 Aethionema arabicum HOM05D003289 ORTHO05D004594 1.0e-26 124.4 177 40.1
MBI18_g03519_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 6.5e-26 121.7 132 49.2
COL.COLO4_06999 Corchorus olitorius HOM05D003289 ORTHO05D004594 1.9e-25 120.2 186 43.5
Pp3c13_4500 Physcomitrium patens HOM05D003289 ORTHO05D004594 2.5e-25 119.8 175 39.4
Glyma.12G087000 Glycine max HOM05D003289 ORTHO05D004594 1.2e-24 117.5 181 38.7
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 7.9e-24 114.8 155 41.3
FAN16G3075 Fragaria x ananassa HOM05D003289 ORTHO05D004594 2.5e-22 109.8 268 29.5
AagrBONN_evm.TU.Sc2ySwM_340.389 Anthoceros agrestis HOM05D003289 ORTHO05D004594 5.3e-20 102.1 188 33.5
Mapoly0006s0290 Marchantia polymorpha HOM05D003289 ORTHO05D004594 9.0e-20 101.3 167 37.1
BcaB07g34067 Brassica carinata HOM05D003289 ORTHO05D004594 3.4e-19 99.4 169 38.5
C05p06350 Brassica napus HOM05D003289 ORTHO05D004594 3.4e-19 99.4 169 38.5
CAN.G1177.9 Capsicum annuum HOM05D003289 ORTHO05D004594 4.5e-19 99.0 101 52.5
A06p05280 Brassica napus HOM05D003289 ORTHO05D004594 1.0e-18 97.8 169 36.7
BraA06t23736Z Brassica rapa HOM05D003289 ORTHO05D004594 1.0e-18 97.8 169 36.7
FAN11G3202 Fragaria x ananassa HOM05D003289 ORTHO05D004594 8.5e-18 94.7 300 26.0
MBI06_g41845_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 1.7e-10 70.5 149 32.9
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 2.1e-08 63.5 149 30.2
Nitab4.5_0003532g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 4.4e-06 55.8 63 47.6
Nitab4.5_0004240g0030 Nicotiana tabacum HOM05D003289 ORTHO05D004594 5.7e-06 55.5 63 46.0


User provided reference genes

Program Settings