Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050650 Amaranthus hybridus HOM05D006570 ORTHO05D008193 6.9e-273 943.3 471 100.0
EL10Ac5g10565 Beta vulgaris HOM05D006570 ORTHO05D008193 1.9e-193 679.5 440 77.3
AUR62028620 Chenopodium quinoa HOM05D006570 ORTHO05D008193 1.5e-190 669.8 471 72.4
AUR62032342 Chenopodium quinoa HOM05D006570 ORTHO05D008193 3.1e-188 662.1 471 71.5
AUR62008045 Chenopodium quinoa HOM05D006570 ORTHO05D008193 9.0e-188 660.6 471 71.3
Hund09495 Selenicereus undatus HOM05D006570 ORTHO05D008193 1.6e-165 586.6 401 73.1
Atru.chr6.3468 Acer truncatum HOM05D006570 ORTHO05D008193 1.2e-160 570.5 429 66.9
Dinv28772 Davidia involucrata HOM05D006570 ORTHO05D008193 6.1e-160 568.2 432 65.7
Potri.014G198000 Populus trichocarpa HOM05D006570 ORTHO05D008193 1.8e-159 566.6 439 64.5
Manes.13G058200 Manihot esculenta HOM05D006570 ORTHO05D008193 9.7e-158 560.8 438 64.2
Oeu020442.2 Olea europaea HOM05D006570 ORTHO05D008193 1.7e-157 560.1 474 61.8
Lj2A1109T67 Lonicera japonica HOM05D006570 ORTHO05D008193 3.7e-157 558.9 466 60.9
Haze_04512 Corylus avellana HOM05D006570 ORTHO05D008193 4.1e-156 555.4 429 65.3
Actinidia11648 Actinidia chinensis HOM05D006570 ORTHO05D008193 2.6e-155 552.7 427 64.6
Prupe.6G214800 Prunus persica HOM05D006570 ORTHO05D008193 5.9e-155 551.6 409 66.3
TWI18G1431 Tripterygium wilfordii HOM05D006570 ORTHO05D008193 2.9e-154 549.3 467 59.5
TAR362G0032 Trochodendron aralioides HOM05D006570 ORTHO05D008193 6.5e-154 548.1 420 64.3
vmacro02851 Vaccinium macrocarpon HOM05D006570 ORTHO05D008193 6.5e-154 548.1 462 61.3
Cfa006298 Carpinus fangiana HOM05D006570 ORTHO05D008193 1.4e-153 547.0 429 64.1
Solyc09g018850.3 Solanum lycopersicum HOM05D006570 ORTHO05D008193 3.2e-153 545.8 424 63.7
Sopen09g012610 Solanum pennellii HOM05D006570 ORTHO05D008193 5.5e-153 545.0 424 63.4
Gohir.D07G093500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 7.2e-153 544.7 440 63.4
Gorai.001G100200 Gossypium raimondii HOM05D006570 ORTHO05D008193 7.2e-153 544.7 440 63.4
SalBow6G3933 Salvia bowleyana HOM05D006570 ORTHO05D008193 7.2e-153 544.7 459 61.2
SalBow2G2795 Salvia bowleyana HOM05D006570 ORTHO05D008193 9.4e-153 544.3 459 61.0
PGSC0003DMG400020287 Solanum tuberosum HOM05D006570 ORTHO05D008193 1.6e-152 543.5 424 63.4
Duzib133G0843 Durio zibethinus HOM05D006570 ORTHO05D008193 3.6e-152 542.3 437 63.2
CANSAT01G0840 Cannabis sativa HOM05D006570 ORTHO05D008193 1.0e-151 540.8 428 64.3
Migut.D00755 Erythranthe guttata HOM05D006570 ORTHO05D008193 1.0e-151 540.8 433 64.2
FvH4_3g28500 Fragaria vesca HOM05D006570 ORTHO05D008193 1.4e-151 540.4 423 65.5
Sc05g0001500 Simmondsia chinensis HOM05D006570 ORTHO05D008193 2.3e-151 539.7 488 59.0
Thecc.01G203700 Theobroma cacao HOM05D006570 ORTHO05D008193 2.3e-151 539.7 457 61.9
Lj3g0023743 Lotus japonicus HOM05D006570 ORTHO05D008193 3.0e-151 539.3 480 58.8
RcHm_v2.0_Chr5g0052821 Rosa chinensis HOM05D006570 ORTHO05D008193 8.8e-151 537.7 421 66.0
Gohir.A07G088500 Gossypium hirsutum HOM05D006570 ORTHO05D008193 5.7e-150 535.0 438 63.2
Cpa.g.sc8.9 Carica papaya HOM05D006570 ORTHO05D008193 1.7e-149 533.5 466 58.8
Ca_23570_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 4.8e-149 531.9 451 59.4
Ca_23579_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 4.8e-149 531.9 451 59.4
Ciclev10015195m.g Citrus clementina HOM05D006570 ORTHO05D008193 4.8e-149 531.9 410 63.9
FAN21G3910 Fragaria x ananassa HOM05D006570 ORTHO05D008193 6.3e-149 531.6 462 61.0
MBI10_g46813_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 8.2e-149 531.2 435 62.3
Peaxi162Scf12724g00014 Petunia axillaris HOM05D006570 ORTHO05D008193 2.4e-148 529.6 462 58.7
Hma1.2p1_0834F.1_g225720 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 3.1e-148 529.3 400 66.8
HanXRQChr16g0508391 Helianthus annuus HOM05D006570 ORTHO05D008193 1.2e-147 527.3 459 57.5
Cc01_g15710 Coffea canephora HOM05D006570 ORTHO05D008193 3.4e-147 525.8 434 60.4
Sabra14G0132400 Salix brachista HOM05D006570 ORTHO05D008193 4.5e-147 525.4 564 51.2
TPR.G5123 Trifolium pratense HOM05D006570 ORTHO05D008193 4.5e-147 525.4 465 57.8
Nitab4.5_0005967g0010 Nicotiana tabacum HOM05D006570 ORTHO05D008193 1.3e-146 523.9 415 61.9
PSO170G2695 Papaver somniferum HOM05D006570 ORTHO05D008193 1.3e-146 523.9 457 60.2
CiPaw.07G077200 Carya illinoinensis HOM05D006570 ORTHO05D008193 1.7e-146 523.5 458 58.7
Aa31sc565G50 Aethionema arabicum HOM05D006570 ORTHO05D008193 2.2e-146 523.1 434 60.8
COL.COLO4_19720 Corchorus olitorius HOM05D006570 ORTHO05D008193 2.9e-146 522.7 405 65.4
Glyma.07G059700 Glycine max HOM05D006570 ORTHO05D008193 2.9e-146 522.7 429 61.3
MD15G1141300 Malus domestica HOM05D006570 ORTHO05D008193 6.5e-146 521.5 410 64.6
Phvul.010G109900 Phaseolus vulgaris HOM05D006570 ORTHO05D008193 6.5e-146 521.5 434 61.1
VMungo0331G0798 Vigna mungo HOM05D006570 ORTHO05D008193 6.5e-146 521.5 437 61.1
Lalb_Chr10g0100201 Lupinus albus HOM05D006570 ORTHO05D008193 1.4e-145 520.4 424 61.8
PGR083G1749 Punica granatum HOM05D006570 ORTHO05D008193 5.5e-145 518.5 422 62.8
Medtr8g028105 Medicago truncatula HOM05D006570 ORTHO05D008193 9.4e-145 517.7 430 61.2
ECA236G3480 Erigeron canadensis HOM05D006570 ORTHO05D008193 2.7e-144 516.2 438 60.3
CsaV3_6G007600 Cucumis sativus L. HOM05D006570 ORTHO05D008193 1.4e-143 513.8 461 58.1
arahy.Tifrunner.gnm1.ann1.L2UBUE Arachis hypogaea HOM05D006570 ORTHO05D008193 1.1e-142 510.8 451 57.9
GSVIVG01004124001 Vitis vinifera HOM05D006570 ORTHO05D008193 1.1e-142 510.8 417 62.6
ATR0743G076 Amborella trichopoda HOM05D006570 ORTHO05D008193 1.3e-141 507.3 402 61.2
THA.LOC104815379 Tarenaya hassleriana HOM05D006570 ORTHO05D008193 2.8e-141 506.1 432 60.2
CDE09G0147 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 3.7e-141 505.8 419 59.4
Carub.0007s3008 Capsella rubella HOM05D006570 ORTHO05D008193 8.2e-141 504.6 424 59.4
HPP92_007590 Vanilla planifolia HOM05D006570 ORTHO05D008193 1.1e-140 504.2 439 60.6
arahy.Tifrunner.gnm1.ann1.N5JW36 Arachis hypogaea HOM05D006570 ORTHO05D008193 1.8e-140 503.4 451 57.4
AL9U11910 Arabidopsis lyrata HOM05D006570 ORTHO05D008193 4.1e-140 502.3 424 58.3
Aqoxy1G01428 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 9.1e-140 501.1 428 60.5
A04p09180 Brassica napus HOM05D006570 ORTHO05D008193 2.6e-139 499.6 423 59.8
Nitab4.5_0009028g0030 Nicotiana tabacum HOM05D006570 ORTHO05D008193 2.6e-139 499.6 439 58.8
Aqoxy7G03970 Aquilegia oxysepala HOM05D006570 ORTHO05D008193 4.5e-139 498.8 446 59.2
ClCG06G001630 Citrullus lanatus HOM05D006570 ORTHO05D008193 4.5e-139 498.8 424 60.6
AT4G12740 Arabidopsis thaliana HOM05D006570 ORTHO05D008193 2.2e-138 496.5 426 58.2
CARHR218120 Cardamine hirsuta HOM05D006570 ORTHO05D008193 2.2e-138 496.5 406 61.1
BcaC02g09469 Brassica carinata HOM05D006570 ORTHO05D008193 8.5e-138 494.6 425 59.8
C04p43140 Brassica napus HOM05D006570 ORTHO05D008193 1.5e-137 493.8 424 59.2
BcaB03g16147 Brassica carinata HOM05D006570 ORTHO05D008193 1.9e-137 493.4 432 57.9
Sp7g09050 Schrenkiella parvula HOM05D006570 ORTHO05D008193 1.9e-137 493.4 432 57.9
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.6e-136 490.3 398 64.3
CAN.G3.13 Capsicum annuum HOM05D006570 ORTHO05D008193 4.7e-136 488.8 381 62.7
Thhalv10024575m.g Eutrema salsugineum HOM05D006570 ORTHO05D008193 6.1e-136 488.4 434 56.5
SHI10196 Sapria himalayana HOM05D006570 ORTHO05D008193 1.4e-132 477.2 438 54.6
BolC4t25891H Brassica oleracea HOM05D006570 ORTHO05D008193 7.0e-132 474.9 417 58.0
BraA04t16613Z Brassica rapa HOM05D006570 ORTHO05D008193 1.2e-131 474.2 423 57.4
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.0e-130 471.1 392 60.7
Os12g0211400 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 8.5e-130 468.0 418 56.7
Psat4g158840 Pisum sativum HOM05D006570 ORTHO05D008193 1.9e-129 466.8 376 62.2
Zm00001eb411200 Zea mays HOM05D006570 ORTHO05D008193 1.8e-127 460.3 458 53.3
SEGI_12299 Sequoiadendron giganteum HOM05D006570 ORTHO05D008193 6.8e-127 458.4 462 53.9
MELO3C022371.2 Cucumis melo HOM05D006570 ORTHO05D008193 2.7e-123 446.4 428 55.6
Os12g0212100 Oryza sativa ssp. japonica HOM05D006570 ORTHO05D008193 1.5e-121 440.7 363 60.6
Lsat_1_v5_gn_8_98640 Lactuca sativa HOM05D006570 ORTHO05D008193 4.7e-120 435.6 425 56.0
Hma1.2p1_0834F.1_g225710 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 2.0e-118 430.3 364 61.8
unitig_90.g27554 Utricularia gibba HOM05D006570 ORTHO05D008193 4.3e-113 412.5 426 52.1
FAN25G2405 Fragaria x ananassa HOM05D006570 ORTHO05D008193 6.8e-111 405.2 520 46.3
Actinidia23139 Actinidia chinensis HOM05D006570 ORTHO05D008193 6.6e-106 388.7 446 48.7
Pp3c18_200 Physcomitrium patens HOM05D006570 ORTHO05D008193 5.6e-105 385.6 387 54.3
MBI10_g40441_MAGBIO Magnolia biondii HOM05D006570 ORTHO05D008193 1.5e-102 377.5 319 61.1
Hma1.2p1_1756F.1_g301050 Hydrangea macrophylla HOM05D006570 ORTHO05D008193 5.8e-102 375.6 320 60.9
Eucgr.H00676 Eucalyptus grandis HOM05D006570 ORTHO05D008193 2.2e-101 373.6 297 62.3
Mapoly0043s0062 Marchantia polymorpha HOM05D006570 ORTHO05D008193 2.2e-101 373.6 388 51.3
SMO202G0040 Selaginella moellendorffii HOM05D006570 ORTHO05D008193 6.4e-85 318.9 296 58.1
FAN11G0847 Fragaria x ananassa HOM05D006570 ORTHO05D008193 1.2e-75 288.1 242 61.2
PRCOL_00001086 Prasinoderma coloniale HOM05D006570 ORTHO05D008193 4.8e-72 276.2 404 42.1
MCO12G048 Micromonas commoda HOM05D006570 ORTHO05D008193 9.0e-71 271.9 469 38.8
QL01p050877 Quercus lobata HOM05D006570 ORTHO05D008193 1.6e-67 261.2 270 51.5
Cre02.g082000 Chlamydomonas reinhardtii HOM05D006570 ORTHO05D008193 4.3e-57 226.5 286 43.7
CSS0008113 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 3.2e-52 210.3 126 80.2
CSS0032158 Camellia sinensis var. sinensis HOM05D006570 ORTHO05D008193 3.2e-52 210.3 126 80.2
GSVIVG01038286001 Vitis vinifera HOM05D006570 ORTHO05D008193 5.7e-49 199.5 184 53.8
Ca_29093_v3 Cicer arietinum L. HOM05D006570 ORTHO05D008193 1.4e-42 178.3 276 38.4
QL01p050896 Quercus lobata HOM05D006570 ORTHO05D008193 6.9e-39 166.0 112 71.4
DCAR_012713 Daucus carota HOM05D006570 ORTHO05D008193 1.7e-37 161.4 127 65.4
CDE02G1275 Ceratophyllum demersum HOM05D006570 ORTHO05D008193 1.1e-31 142.1 110 62.7
QL05p014267 Quercus lobata HOM05D006570 ORTHO05D008193 3.3e-25 120.6 187 40.1
CBR_g38520 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-23 112.8 96 58.3
Glyma.16G028601 Glycine max HOM05D006570 ORTHO05D008193 3.5e-22 110.5 114 46.5
PGR142G0081 Punica granatum HOM05D006570 ORTHO05D008193 7.7e-22 109.4 130 49.2
QL05p014599 Quercus lobata HOM05D006570 ORTHO05D008193 5.5e-20 103.2 128 47.7
CBR_g38518 Chara braunii HOM05D000019 ORTHO05D000048 4.5e-14 83.6 140 37.9


User provided reference genes

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