Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g047120 Amaranthus hybridus HOM05D001061 ORTHO05D006881 6.8e-93 344.0 172 100.0
AUR62036955 Chenopodium quinoa HOM05D001061 ORTHO05D006881 5.5e-18 95.1 259 33.6
EL10Ac5g11250 Beta vulgaris HOM05D001061 ORTHO05D006881 3.6e-17 92.4 200 36.5
AUR62032190 Chenopodium quinoa HOM05D001061 ORTHO05D006881 1.0e-16 90.9 267 31.8
Hund09999 Selenicereus undatus HOM05D001061 ORTHO05D006881 6.7e-16 88.2 200 33.5
Eucgr.B00700 Eucalyptus grandis HOM05D001061 ORTHO05D006881 1.3e-14 84.0 271 29.9
PGR083G2045 Punica granatum HOM05D001061 ORTHO05D006881 2.8e-14 82.8 271 30.6
Sc10g0009570 Simmondsia chinensis HOM05D001061 ORTHO05D006881 3.7e-14 82.4 221 33.9
COL.COLO4_22718 Corchorus olitorius HOM05D001061 ORTHO05D006881 8.2e-14 81.3 271 30.3
arahy.Tifrunner.gnm1.ann1.ERX1RE Arachis hypogaea HOM05D001061 ORTHO05D006881 2.4e-13 79.7 267 30.0
Nitab4.5_0001432g0030 Nicotiana tabacum HOM05D001061 ORTHO05D006881 2.4e-13 79.7 175 33.7
arahy.Tifrunner.gnm1.ann1.J2PRY0 Arachis hypogaea HOM05D001061 ORTHO05D006881 3.1e-13 79.3 267 30.0
Ca_02537_v3 Cicer arietinum L. HOM05D001061 ORTHO05D006881 3.1e-13 79.3 267 31.1
Duzib205G1584 Durio zibethinus HOM05D001061 ORTHO05D006881 3.1e-13 79.3 267 31.8
GSVIVG01008235001 Vitis vinifera HOM05D001061 ORTHO05D006881 3.1e-13 79.3 259 30.9
Gohir.A09G046500 Gossypium hirsutum HOM05D001061 ORTHO05D006881 5.3e-13 78.6 204 31.9
SGA_v2.0_scaffold19G08803 Striga asiatica HOM05D001061 ORTHO05D006881 5.3e-13 78.6 265 29.8
DCAR_023182 Daucus carota HOM05D001061 ORTHO05D006881 9.1e-13 77.8 267 30.3
TAR622G0643 Trochodendron aralioides HOM05D001061 ORTHO05D006881 9.1e-13 77.8 267 30.3
ClCG06G015030 Citrullus lanatus HOM05D001061 ORTHO05D006881 1.2e-12 77.4 267 29.6
Glyma.17G121400 Glycine max HOM05D001061 ORTHO05D006881 1.2e-12 77.4 267 29.6
Gohir.D09G046800 Gossypium hirsutum HOM05D001061 ORTHO05D006881 1.2e-12 77.4 204 31.4
Gorai.006G063300 Gossypium raimondii HOM05D001061 ORTHO05D006881 1.2e-12 77.4 204 31.4
vmacro17676 Vaccinium macrocarpon HOM05D001061 ORTHO05D006881 2.0e-12 76.6 267 30.3
Actinidia31031 Actinidia chinensis HOM05D001061 ORTHO05D006881 2.6e-12 76.3 267 31.1
ECA246G2868 Erigeron canadensis HOM05D001061 ORTHO05D006881 2.6e-12 76.3 267 28.8
PGSC0003DMG400004071 Solanum tuberosum HOM05D001061 ORTHO05D006881 2.6e-12 76.3 259 31.3
Thecc.03G028100 Theobroma cacao HOM05D001061 ORTHO05D006881 2.6e-12 76.3 204 31.4
Ciclev10018746m.g Citrus clementina HOM05D001061 ORTHO05D006881 3.4e-12 75.9 267 29.2
Haze_18615 Corylus avellana HOM05D001061 ORTHO05D006881 3.4e-12 75.9 200 31.5
Hma1.2p1_0340F.1_g129890 Hydrangea macrophylla HOM05D001061 ORTHO05D006881 3.4e-12 75.9 200 33.5
MD14G1221900 Malus domestica HOM05D001061 ORTHO05D006881 3.4e-12 75.9 267 29.6
Lalb_Chr12g0197571 Lupinus albus HOM05D001061 ORTHO05D006881 4.5e-12 75.5 267 28.8
Oeu031818.1 Olea europaea HOM05D001061 ORTHO05D006881 4.5e-12 75.5 258 31.4
MD06G1211200 Malus domestica HOM05D001061 ORTHO05D006881 5.9e-12 75.1 267 29.2
Rhsim08G0137000 Rhododendron simsii HOM05D001061 ORTHO05D006881 5.9e-12 75.1 269 29.7
Solyc06g069230.3 Solanum lycopersicum HOM05D001061 ORTHO05D006881 5.9e-12 75.1 259 31.3
Sopen06g026490 Solanum pennellii HOM05D001061 ORTHO05D006881 5.9e-12 75.1 259 31.3
Atru.chr9.754 Acer truncatum HOM05D001061 ORTHO05D006881 7.7e-12 74.7 200 30.5
CANSAT80G1355 Cannabis sativa HOM05D001061 ORTHO05D006881 7.7e-12 74.7 267 31.1
CAN.G587.78 Capsicum annuum HOM05D001061 ORTHO05D006881 7.7e-12 74.7 200 33.0
Cpa.g.c35114 Carica papaya HOM05D001061 ORTHO05D006881 7.7e-12 74.7 267 30.3
Potri.012G060000 Populus trichocarpa HOM05D001061 ORTHO05D006881 7.7e-12 74.7 225 31.6
CsaV3_1G003630 Cucumis sativus L. HOM05D001061 ORTHO05D006881 1.0e-11 74.3 271 28.4
Migut.I00396 Erythranthe guttata HOM05D001061 ORTHO05D006881 1.0e-11 74.3 261 30.3
Lj4g0007114 Lotus japonicus HOM05D001061 ORTHO05D006881 1.0e-11 74.3 200 30.0
QL10p022714 Quercus lobata HOM05D001061 ORTHO05D006881 1.3e-11 73.9 200 30.5
Cc04_g07520 Coffea canephora HOM05D001061 ORTHO05D006881 1.7e-11 73.6 259 30.1
Dinv36905 Davidia involucrata HOM05D001061 ORTHO05D006881 1.7e-11 73.6 204 30.9
Sed0003655 Sechium edule HOM05D001061 ORTHO05D006881 1.7e-11 73.6 268 28.4
SHI18889 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-11 73.2 200 29.5
CiPaw.15G126900 Carya illinoinensis HOM05D001061 ORTHO05D006881 2.9e-11 72.8 267 30.0
FAN04G0918 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.9e-11 72.8 259 30.9
Phvul.003G177100 Phaseolus vulgaris HOM05D001061 ORTHO05D006881 2.9e-11 72.8 267 30.0
Prupe.5G217300 Prunus persica HOM05D001061 ORTHO05D006881 2.9e-11 72.8 267 29.6
MSTRG.11316 Avicennia marina HOM05D001061 ORTHO05D006881 3.8e-11 72.4 200 30.5
Lalb_Chr13g0302331 Lupinus albus HOM05D001061 ORTHO05D006881 3.8e-11 72.4 200 31.0
Os05g0274200 Oryza sativa ssp. japonica HOM05D001061 ORTHO05D006881 3.8e-11 72.4 200 30.0
CDE10G0399 Ceratophyllum demersum HOM05D001061 ORTHO05D006881 5.0e-11 72.0 259 28.2
FvH4_5g12700 Fragaria vesca HOM05D001061 ORTHO05D006881 5.0e-11 72.0 259 30.5
FAN18G1105 Fragaria x ananassa HOM05D001061 ORTHO05D006881 5.0e-11 72.0 259 30.9
FAN18G1805 Fragaria x ananassa HOM05D001061 ORTHO05D006881 5.0e-11 72.0 259 30.5
Psat4g083360 Pisum sativum HOM05D001061 ORTHO05D006881 5.0e-11 72.0 221 33.9
RcHm_v2.0_Chr7g0184631 Rosa chinensis HOM05D001061 ORTHO05D006881 5.0e-11 72.0 259 30.9
Nn4g23718 Nelumbo nucifera HOM05D001061 ORTHO05D006881 6.5e-11 71.6 259 29.0
Peaxi162Scf00013g00939 Petunia axillaris HOM05D001061 ORTHO05D006881 6.5e-11 71.6 200 30.5
TPR.G26764 Trifolium pratense HOM05D001061 ORTHO05D006881 8.5e-11 71.2 267 29.6
MELO3C017287.2 Cucumis melo HOM05D001061 ORTHO05D006881 1.1e-10 70.9 271 28.0
FAN13G0485 Fragaria x ananassa HOM05D002339 ORTHO05D006881 1.1e-10 70.9 259 30.5
BcaC01g03695 Brassica carinata HOM05D001061 ORTHO05D006881 1.4e-10 70.5 200 29.0
C03p49490 Brassica napus HOM05D001061 ORTHO05D006881 1.4e-10 70.5 200 29.0
BolC3t17247H Brassica oleracea HOM05D001061 ORTHO05D006881 1.4e-10 70.5 200 29.0
CSS0050177 Camellia sinensis var. sinensis HOM05D001061 ORTHO05D006881 1.4e-10 70.5 200 31.5
Sabra12G0043000 Salix brachista HOM05D001061 ORTHO05D006881 1.4e-10 70.5 225 29.8
Aa31LG8G5400 Aethionema arabicum HOM05D001061 ORTHO05D006881 1.9e-10 70.1 204 29.9
PSO782G4375 Papaver somniferum HOM05D001061 ORTHO05D006881 1.9e-10 70.1 267 29.2
Sp3g16620 Schrenkiella parvula HOM05D001061 ORTHO05D006881 1.9e-10 70.1 200 29.5
FAN08G1716 Fragaria x ananassa HOM05D001061 ORTHO05D006881 2.5e-10 69.7 200 31.5
Medtr4g111945 Medicago truncatula HOM05D001061 ORTHO05D006881 2.5e-10 69.7 267 29.6
VMungo1215G1249 Vigna mungo HOM05D001061 ORTHO05D006881 2.5e-10 69.7 266 28.6
CARHR093910 Cardamine hirsuta HOM05D001061 ORTHO05D006881 4.2e-10 68.9 200 31.0
Zm00001eb016860 Zea mays HOM05D001061 ORTHO05D006881 4.2e-10 68.9 177 30.5
ATR0681G268 Amborella trichopoda HOM05D001061 ORTHO05D006881 5.5e-10 68.6 199 31.7
TWI15G0827 Tripterygium wilfordii HOM05D001061 ORTHO05D006881 7.2e-10 68.2 203 28.6
Lj5C145G2 Lonicera japonica HOM05D001061 ORTHO05D006881 9.4e-10 67.8 200 28.5
Manes.01G020600 Manihot esculenta HOM05D001061 ORTHO05D006881 9.4e-10 67.8 267 28.5
unitig_61.g26195 Utricularia gibba HOM05D001061 ORTHO05D006881 9.4e-10 67.8 200 28.0
AT3G18524 Arabidopsis thaliana HOM05D001061 ORTHO05D006881 1.2e-09 67.4 200 28.5
BraA03t13227Z Brassica rapa HOM05D001061 ORTHO05D006881 1.2e-09 67.4 204 27.9
BcaB04g18987 Brassica carinata HOM05D001061 ORTHO05D006881 1.6e-09 67.0 200 29.0
A03p40700 Brassica napus HOM05D001061 ORTHO05D006881 2.1e-09 66.6 204 27.9
Carub.0003s1832 Capsella rubella HOM05D001061 ORTHO05D006881 2.1e-09 66.6 200 28.0
AUR62043676 Chenopodium quinoa HOM05D001061 ORTHO05D006881 2.1e-09 66.6 249 30.5
PSO063G4650 Papaver somniferum HOM05D001061 ORTHO05D006881 2.1e-09 66.6 259 28.6
AL3G31850 Arabidopsis lyrata HOM05D001061 ORTHO05D006881 3.6e-09 65.9 200 28.0
Zm00001eb326520 Zea mays HOM05D001061 ORTHO05D006881 6.1e-09 65.1 267 26.2
Thhalv10020006m.g Eutrema salsugineum HOM05D001061 ORTHO05D006881 8.0e-09 64.7 198 28.8
HanXRQChr05g0153891 Helianthus annuus HOM05D001061 ORTHO05D006881 8.0e-09 64.7 267 28.5
Lsat_1_v5_gn_5_25080 Lactuca sativa HOM05D001061 ORTHO05D006881 8.0e-09 64.7 200 29.0
Zm00001eb079080 Zea mays HOM05D001061 ORTHO05D006881 1.0e-08 64.3 187 28.9
AagrBONN_evm.TU.Sc2ySwM_344.1255 Anthoceros agrestis HOM05D001061 ORTHO05D006881 1.8e-08 63.5 261 26.8
Aqoxy3G03903 Aquilegia oxysepala HOM05D001061 ORTHO05D006881 3.0e-08 62.8 200 29.0
Pp3c22_850 Physcomitrium patens HOM05D001061 ORTHO05D006881 2.0e-07 60.1 201 28.4
SMO347G0538 Selaginella moellendorffii HOM05D001061 ORTHO05D006881 2.6e-07 59.7 200 24.0
Psat4g043480 Pisum sativum HOM05D001061 ORTHO05D006881 6.3e-06 55.1 95 33.7


User provided reference genes

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