Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.2e-216 755.4 379 100.0
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 9.1e-183 643.7 379 82.6
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.3e-173 613.2 379 79.7
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 8.9e-162 573.9 379 73.1
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 3.1e-154 548.9 378 68.5
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 2.4e-151 539.3 373 69.7
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.5e-145 520.0 409 66.3
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 2.4e-143 512.7 380 64.2
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 3.2e-143 512.3 383 65.3
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 1.2e-142 510.4 380 65.8
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 1.6e-142 510.0 381 65.4
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 3.5e-142 508.8 379 65.7
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 6.0e-142 508.1 383 64.8
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 1.0e-141 507.3 376 65.7
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 8.6e-141 504.2 380 65.3
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 7.3e-140 501.1 377 64.7
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 9.6e-140 500.7 380 64.5
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.2e-139 500.4 376 64.9
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 3.6e-139 498.8 380 64.2
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 8.1e-139 497.7 379 64.1
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 1.4e-138 496.9 402 61.2
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 1.8e-138 496.5 376 63.8
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 4.0e-138 495.4 377 64.2
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 6.9e-138 494.6 381 63.0
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.0e-138 494.2 374 64.4
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.5e-137 493.4 377 63.7
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 1.5e-137 493.4 377 64.2
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 3.4e-137 492.3 379 63.9
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 1.1e-135 487.3 373 63.5
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 1.1e-135 487.3 383 60.8
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 1.1e-135 487.3 379 63.1
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 1.2e-134 483.8 380 62.1
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 1.2e-134 483.8 379 60.9
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 3.5e-134 482.3 380 61.3
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 1.7e-133 479.9 351 65.5
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 3.9e-133 478.8 382 61.5
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.1e-132 477.2 376 61.2
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 7.3e-132 474.6 384 60.2
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 1.3e-131 473.8 376 60.9
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 1.3e-131 473.8 381 60.4
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 2.1e-131 473.0 377 61.0
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 3.6e-131 472.2 379 59.4
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 4.8e-131 471.9 378 63.5
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 8.1e-131 471.1 375 61.9
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 8.1e-131 471.1 375 61.3
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 1.1e-130 470.7 377 60.7
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 2.4e-130 469.5 382 61.0
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 2.4e-130 469.5 379 59.4
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 3.1e-130 469.2 379 59.6
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 9.0e-130 467.6 369 61.5
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 4.5e-129 465.3 349 65.9
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 3.8e-128 462.2 376 59.3
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 6.4e-128 461.5 376 62.5
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 4.2e-127 458.8 383 58.7
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 4.2e-127 458.8 379 60.7
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 7.1e-127 458.0 379 57.8
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 2.1e-126 456.4 381 59.1
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 2.7e-126 456.1 420 56.2
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 1.3e-125 453.8 381 58.3
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 1.3e-125 453.8 377 59.7
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 2.5e-124 449.5 378 60.8
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 9.6e-124 447.6 301 69.8
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 1.6e-123 446.8 380 57.1
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 2.1e-123 446.4 379 58.0
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 3.7e-123 445.7 376 57.2
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 4.8e-123 445.3 379 58.0
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 6.2e-123 444.9 379 58.0
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.4e-122 443.7 366 60.1
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.8e-122 443.4 373 58.7
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 1.8e-122 443.4 422 54.7
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 1.5e-121 440.3 408 56.9
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 3.4e-121 439.1 358 60.3
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 9.9e-121 437.6 381 56.4
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.3e-120 437.2 382 58.6
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 1.3e-120 437.2 374 59.4
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 3.8e-120 435.6 379 57.5
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 6.4e-120 434.9 374 57.5
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 3.2e-119 432.6 408 55.6
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 9.3e-119 431.0 378 55.8
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.2e-118 430.6 357 61.1
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 4.6e-118 428.7 374 57.2
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 6.0e-118 428.3 289 69.6
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 2.3e-117 426.4 376 59.0
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 3.0e-117 426.0 375 57.3
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 1.5e-116 423.7 374 57.0
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 9.6e-116 421.0 383 55.1
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 2.4e-114 416.4 379 53.6
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 3.8e-112 409.1 388 54.4
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 6.5e-112 408.3 390 54.6
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 7.1e-111 404.8 377 56.0
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 1.8e-109 400.2 378 55.8
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 1.5e-108 397.1 352 57.1
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 7.9e-102 374.8 315 57.8
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 3.9e-101 372.5 303 57.4
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 7.4e-100 368.2 374 55.3
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 1.3e-99 367.5 371 48.8
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 3.4e-97 359.4 399 48.1
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.4e-95 354.0 370 51.9
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 2.7e-78 296.6 382 42.1
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 7.0e-74 282.0 224 59.8
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.6e-68 263.5 188 68.1
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 4.7e-62 242.7 276 49.6
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 4.4e-52 209.5 174 60.3
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 1.8e-45 187.6 166 54.2
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 7.0e-42 175.6 164 54.9
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 9.2e-42 175.3 334 33.5
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 1.6e-41 174.5 158 53.8
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 5.4e-26 122.9 142 47.2
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 2.1e-25 120.9 138 46.4
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 2.3e-24 117.5 427 26.5
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 8.1e-22 109.0 80 61.2
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 1.8e-21 107.8 68 66.2
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 1.4e-18 98.2 117 45.3
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 1.0e-16 92.0 69 65.2
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 1.8e-13 81.3 95 45.3
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 2.3e-08 64.3 117 35.9
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 2.3e-08 64.3 68 57.4
vmacro19271 Vaccinium macrocarpon HOM05D000464 ORTHO05D006292 1.1e-07 62.0 186 27.4
vmacro23261 Vaccinium macrocarpon HOM05D000464 ORTHO05D006292 1.1e-07 62.0 186 27.4
FAN10G1082 Fragaria x ananassa HOM05D001335 ORTHO05D001184 7.4e-07 59.3 177 23.2
BraA09t41176Z Brassica rapa HOM05D004736 ORTHO05D006424 1.6e-06 58.2 223 21.5
MSTRG.9273 Avicennia marina HOM05D003769 ORTHO05D004521 2.8e-06 57.4 124 26.6
CDE08G0852 Ceratophyllum demersum HOM05D000464 ORTHO05D006292 3.7e-06 57.0 81 30.9
Eucgr.L00018 Eucalyptus grandis HOM05D005323 ORTHO05D006820 3.7e-06 57.0 113 33.6
SEGI_34732 Sequoiadendron giganteum HOM05D001335 ORTHO05D001184 3.7e-06 57.0 125 28.0
Dinv40419 Davidia involucrata HOM05D003769 ORTHO05D004521 4.8e-06 56.6 123 26.0
Phvul.005G107100 Phaseolus vulgaris HOM05D002332 ORTHO05D002509 6.2e-06 56.2 76 31.6
Zm00001eb250580 Zea mays HOM05D001335 ORTHO05D001184 6.2e-06 56.2 103 30.1


User provided reference genes

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