Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G500 Aethionema arabicum HOM05D005526 ORTHO05D006802 6.9e-221 770.4 407 100.0
Sp5g35600 Schrenkiella parvula HOM05D005526 ORTHO05D006802 3.7e-166 588.6 408 79.2
BcaB02g07290 Brassica carinata HOM05D005526 ORTHO05D006802 1.1e-165 587.0 426 75.8
Thhalv10018648m.g Eutrema salsugineum HOM05D005526 ORTHO05D006802 6.2e-161 571.2 408 78.2
CARHR074270 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.0e-160 568.5 411 77.4
C06p28990 Brassica napus HOM05D005526 ORTHO05D006802 4.4e-159 565.1 430 73.3
A07p26570 Brassica napus HOM05D005526 ORTHO05D006802 5.8e-159 564.7 430 73.3
BolC6t38065H Brassica oleracea HOM05D005526 ORTHO05D006802 1.3e-158 563.5 429 73.4
BcaC08g45297 Brassica carinata HOM05D005526 ORTHO05D006802 2.2e-158 562.8 426 73.2
THA.LOC104812497 Tarenaya hassleriana HOM05D005526 ORTHO05D006802 1.7e-155 553.1 416 74.0
AT3G06820 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 4.3e-154 548.5 409 75.8
AT1G80210 Arabidopsis thaliana HOM05D005526 ORTHO05D006802 1.1e-149 533.9 374 78.9
BraA07t30300Z Brassica rapa HOM05D005526 ORTHO05D006802 3.1e-144 515.8 406 71.7
Cpa.g.sc336.8 Carica papaya HOM05D005526 ORTHO05D006802 9.6e-138 494.2 419 67.3
Ciclev10025661m.g Citrus clementina HOM05D005526 ORTHO05D006802 7.1e-133 478.0 433 64.4
TWI75G1755 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 2.1e-132 476.5 436 63.8
TWI18G0833 Tripterygium wilfordii HOM05D005526 ORTHO05D006802 6.0e-132 474.9 436 63.5
AL3G17940 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 1.0e-131 474.2 299 84.3
Dinv38097 Davidia involucrata HOM05D005526 ORTHO05D006802 2.3e-131 473.0 410 65.4
Cfa002011 Carpinus fangiana HOM05D005526 ORTHO05D006802 3.9e-131 472.2 409 65.3
Manes.04G116500 Manihot esculenta HOM05D005526 ORTHO05D006802 5.1e-131 471.9 406 66.5
Atru.chr1.3093 Acer truncatum HOM05D005526 ORTHO05D006802 1.1e-130 470.7 438 63.5
Thecc.06G073100 Theobroma cacao HOM05D005526 ORTHO05D006802 1.1e-130 470.7 406 66.3
Duzib235G1092 Durio zibethinus HOM05D005526 ORTHO05D006802 3.7e-129 465.7 406 65.8
Actinidia08810 Actinidia chinensis HOM05D005526 ORTHO05D006802 1.1e-128 464.2 406 65.3
CiPaw.01G244400 Carya illinoinensis HOM05D005526 ORTHO05D006802 4.0e-128 462.2 399 64.4
TAR383G0281 Trochodendron aralioides HOM05D005526 ORTHO05D006802 9.0e-128 461.1 406 65.0
CSS0037293 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 4.5e-127 458.8 406 63.8
Gohir.D06G117200 Gossypium hirsutum HOM05D005526 ORTHO05D006802 4.5e-127 458.8 434 62.9
Gorai.010G134800 Gossypium raimondii HOM05D005526 ORTHO05D006802 1.3e-126 457.2 434 62.7
MD09G1221000 Malus domestica HOM05D005526 ORTHO05D006802 2.2e-126 456.4 403 65.5
Gohir.A06G112600 Gossypium hirsutum HOM05D005526 ORTHO05D006802 5.5e-125 451.8 413 64.6
FvH4_6g30340 Fragaria vesca HOM05D005526 ORTHO05D006802 2.7e-124 449.5 405 63.5
Lj3g0017842 Lotus japonicus HOM05D005526 ORTHO05D006802 2.7e-124 449.5 401 61.8
AL2G41300 Arabidopsis lyrata HOM05D005526 ORTHO05D006802 3.5e-124 449.1 299 80.9
FAN02G2127 Fragaria x ananassa HOM05D005526 ORTHO05D006802 4.6e-124 448.7 405 63.5
Carub.0002s2731 Capsella rubella HOM05D005526 ORTHO05D006802 1.3e-123 447.2 300 81.0
Eucgr.J03045 Eucalyptus grandis HOM05D005526 ORTHO05D006802 3.9e-123 445.7 406 64.3
Prupe.3G079900 Prunus persica HOM05D005526 ORTHO05D006802 6.7e-123 444.9 399 65.4
CsaV3_4G001390 Cucumis sativus L. HOM05D005526 ORTHO05D006802 1.5e-122 443.7 407 62.2
Sed0002477 Sechium edule HOM05D005526 ORTHO05D006802 1.5e-122 443.7 406 61.6
Medtr2g103110 Medicago truncatula HOM05D005526 ORTHO05D006802 1.9e-122 443.4 396 63.6
Glyma.15G010400 Glycine max HOM05D005526 ORTHO05D006802 2.5e-122 443.0 400 62.0
Glyma.13G363400 Glycine max HOM05D005526 ORTHO05D006802 5.7e-122 441.8 400 61.8
Nn2g11952 Nelumbo nucifera HOM05D005526 ORTHO05D006802 2.2e-121 439.9 406 61.8
Ca_01085_v3 Cicer arietinum L. HOM05D005526 ORTHO05D006802 3.7e-121 439.1 416 60.8
Potri.001G172800 Populus trichocarpa HOM05D005526 ORTHO05D006802 3.7e-121 439.1 408 62.7
QL05p027824 Quercus lobata HOM05D005526 ORTHO05D006802 3.7e-121 439.1 491 54.0
ClCG07G012810 Citrullus lanatus HOM05D005526 ORTHO05D006802 4.8e-121 438.7 412 61.2
ECA234G2940 Erigeron canadensis HOM05D005526 ORTHO05D006802 2.0e-119 433.3 406 62.6
CANSAT56G0953 Cannabis sativa HOM05D005526 ORTHO05D006802 1.0e-118 431.0 423 61.0
Rhsim12G0193000 Rhododendron simsii HOM05D005526 ORTHO05D006802 9.4e-117 424.5 511 52.4
Phvul.005G174900 Phaseolus vulgaris HOM05D005526 ORTHO05D006802 1.2e-116 424.1 406 59.4
vmacro16915 Vaccinium macrocarpon HOM05D005526 ORTHO05D006802 1.6e-116 423.7 531 51.4
Aqoxy7G02084 Aquilegia oxysepala HOM05D005526 ORTHO05D006802 3.6e-116 422.5 406 63.3
DCAR_025483 Daucus carota HOM05D005526 ORTHO05D006802 4.6e-116 422.2 411 61.6
MD17G1204400 Malus domestica HOM05D005526 ORTHO05D006802 6.7e-115 418.3 484 54.5
Oeu052283.1 Olea europaea HOM05D005526 ORTHO05D006802 1.5e-114 417.2 445 57.5
PGR031G1627 Punica granatum HOM05D005526 ORTHO05D006802 2.5e-114 416.4 420 61.0
Lsat_1_v5_gn_5_132520 Lactuca sativa HOM05D005526 ORTHO05D006802 4.3e-114 415.6 405 60.7
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea HOM05D005526 ORTHO05D006802 9.7e-114 414.5 407 60.0
SalBow2G2365 Salvia bowleyana HOM05D005526 ORTHO05D006802 1.3e-113 414.1 411 59.4
AUR62011560 Chenopodium quinoa HOM05D005526 ORTHO05D006802 8.2e-113 411.4 406 59.9
MBI01_g11875_MAGBIO Magnolia biondii HOM05D005526 ORTHO05D006802 8.2e-113 411.4 417 59.0
Migut.D01055 Erythranthe guttata HOM05D005526 ORTHO05D006802 1.1e-112 411.0 391 60.6
Hund06580 Selenicereus undatus HOM05D005526 ORTHO05D006802 3.1e-112 409.5 408 59.1
PSO170G3249 Papaver somniferum HOM05D005526 ORTHO05D006802 6.9e-112 408.3 406 59.4
AUR62016379 Chenopodium quinoa HOM05D005526 ORTHO05D006802 2.0e-111 406.8 408 59.1
Dinv30571 Davidia involucrata HOM05D005526 ORTHO05D006802 3.4e-111 406.0 365 63.8
VMungo1080G0636 Vigna mungo HOM05D005526 ORTHO05D006802 7.7e-111 404.8 406 56.4
SGA_v2.0_scaffold16G07615 Striga asiatica HOM05D005526 ORTHO05D006802 1.7e-110 403.7 423 57.2
MSTRG.9436 Avicennia marina HOM05D005526 ORTHO05D006802 2.9e-110 402.9 432 56.9
EL10Ac9g21940 Beta vulgaris HOM05D005526 ORTHO05D006802 1.4e-109 400.6 402 57.7
Solyc06g067990.3 Solanum lycopersicum HOM05D005526 ORTHO05D006802 2.5e-109 399.8 427 57.4
Nitab4.5_0000620g0060 Nicotiana tabacum HOM05D005526 ORTHO05D006802 1.2e-108 397.5 428 57.2
Sc10g0005720 Simmondsia chinensis HOM05D005526 ORTHO05D006802 1.8e-107 393.7 406 59.6
FAN09G0405 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.1e-104 384.4 404 57.4
CDE02G1452 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 1.5e-103 380.6 387 57.1
Ah.01g020810 Amaranthus hybridus HOM05D005526 ORTHO05D006802 3.5e-103 379.4 405 56.3
CiPaw.02G154800 Carya illinoinensis HOM05D005526 ORTHO05D006802 1.5e-98 364.0 323 65.3
Peaxi162Scf00207g00731 Petunia axillaris HOM05D005526 ORTHO05D006802 8.5e-94 348.2 435 50.6
GSVIVG01017251001 Vitis vinifera HOM05D005526 ORTHO05D006802 1.0e-91 341.3 297 62.6
Os05g0542600 Oryza sativa ssp. japonica HOM05D005526 ORTHO05D006802 1.8e-91 340.5 387 52.5
Lj5C68G25 Lonicera japonica HOM05D005526 ORTHO05D006802 4.0e-91 339.3 300 63.3
CSS0003126 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.0e-90 337.0 297 64.3
Zm00001eb294490 Zea mays HOM05D005526 ORTHO05D006802 2.0e-90 337.0 407 51.6
COL.COLO4_12896 Corchorus olitorius HOM05D005526 ORTHO05D006802 2.6e-90 336.7 301 64.5
RcHm_v2.0_Chr2g0136621 Rosa chinensis HOM05D005526 ORTHO05D006802 5.7e-90 335.5 321 59.5
SEGI_35764 Sequoiadendron giganteum HOM05D005526 ORTHO05D006802 3.1e-88 329.7 411 50.1
Psat5g300440 Pisum sativum HOM05D005526 ORTHO05D006802 7.0e-88 328.6 305 60.3
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea HOM05D005526 ORTHO05D006802 1.6e-87 327.4 428 50.7
MELO3C017901.2 Cucumis melo HOM05D005526 ORTHO05D006802 3.5e-87 326.2 297 60.6
Nitab4.5_0013710g0010 Nicotiana tabacum HOM05D005526 ORTHO05D006802 5.9e-87 325.5 434 51.6
HanXRQChr10g0303071 Helianthus annuus HOM05D005526 ORTHO05D006802 3.8e-86 322.8 299 61.5
TPR.G37284 Trifolium pratense HOM05D005526 ORTHO05D006802 2.7e-84 316.6 286 60.5
Lalb_Chr14g0373681 Lupinus albus HOM05D005526 ORTHO05D006802 1.4e-83 314.3 301 59.1
CAN.G395.46 Capsicum annuum HOM05D005526 ORTHO05D006802 1.1e-80 304.7 318 59.7
SGA_v2.0_scaffold37G14789 Striga asiatica HOM05D005526 ORTHO05D006802 3.1e-80 303.1 389 50.9
Sopen06g025270 Solanum pennellii HOM05D005526 ORTHO05D006802 1.0e-78 298.1 319 57.1
Oeu063802.2 Olea europaea HOM05D005526 ORTHO05D006802 1.9e-77 293.9 323 55.7
Cc04_g04020 Coffea canephora HOM05D005526 ORTHO05D006802 1.2e-76 291.2 295 58.0
unitig_899.g14780 Utricularia gibba HOM05D005526 ORTHO05D006802 1.6e-76 290.8 392 48.7
CDE01G0292 Ceratophyllum demersum HOM05D005526 ORTHO05D006802 5.2e-75 285.8 389 47.6
Pp3c27_4740 Physcomitrium patens HOM05D005526 ORTHO05D006802 1.6e-71 274.2 411 43.1
Mapoly0053s0043 Marchantia polymorpha HOM05D005526 ORTHO05D006802 3.9e-70 269.6 403 44.9
ATR1156G007 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.5e-69 266.9 305 52.8
CBR_g46861 Chara braunii HOM05D005526 ORTHO05D006802 9.5e-69 265.0 422 42.9
HPP92_009843 Vanilla planifolia HOM05D005526 ORTHO05D006802 6.0e-63 245.7 281 52.7
Haze_16512 Corylus avellana HOM05D005526 ORTHO05D006802 2.9e-57 226.9 229 59.4
Haze_16513 Corylus avellana HOM05D005526 ORTHO05D006802 4.9e-57 226.1 190 63.2
FAN14G4362 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.2e-50 204.9 272 48.2
Oeu014842.2 Olea europaea HOM05D005526 ORTHO05D006802 9.2e-48 195.3 325 44.9
Zm00001eb342510 Zea mays HOM05D005526 ORTHO05D006802 1.8e-43 181.0 220 53.2
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis HOM05D005526 ORTHO05D006802 4.0e-43 179.9 306 41.8
FAN05G1558 Fragaria x ananassa HOM05D005526 ORTHO05D006802 1.7e-33 147.9 81 91.4
RcHm_v2.0_Chr2g0136631 Rosa chinensis HOM05D005526 ORTHO05D006802 1.7e-33 147.9 81 91.4
CSS0009710 Camellia sinensis var. sinensis HOM05D005526 ORTHO05D006802 2.2e-33 147.5 112 72.3
Sabra01G0138900 Salix brachista HOM05D005526 ORTHO05D006802 2.4e-32 144.1 83 86.7
GSVIVG01017250001 Vitis vinifera HOM05D005526 ORTHO05D006802 5.4e-32 142.9 78 91.0
ATR1156G076 Amborella trichopoda HOM05D005526 ORTHO05D006802 2.1e-31 141.0 88 83.0
Sed0012845 Sechium edule HOM05D005526 ORTHO05D006802 1.3e-30 138.3 327 36.7
TPR.G37278 Trifolium pratense HOM05D005526 ORTHO05D006802 1.7e-30 137.9 84 82.1
HanXRQChr10g0303081 Helianthus annuus HOM05D005526 ORTHO05D006802 3.0e-30 137.1 82 86.6
Lj5A68T70 Lonicera japonica HOM05D005526 ORTHO05D006802 1.1e-29 135.2 82 81.7
SMO196G0028 Selaginella moellendorffii HOM05D005526 ORTHO05D006802 3.3e-29 133.7 272 34.6
Cc04_g04010 Coffea canephora HOM05D005526 ORTHO05D006802 4.3e-29 133.3 82 82.9
Lalb_Chr14g0373671 Lupinus albus HOM05D005526 ORTHO05D006802 5.6e-29 132.9 82 79.3
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis HOM05D005526 ORTHO05D006802 6.2e-28 129.4 81 77.8
Sopen06g025280 Solanum pennellii HOM05D005526 ORTHO05D006802 6.2e-28 129.4 82 78.0
PGSC0003DMG401028513 Solanum tuberosum HOM05D005526 ORTHO05D006802 6.2e-28 129.4 82 78.0
Cre11.g475400 Chlamydomonas reinhardtii HOM05D005526 ORTHO05D006802 7.6e-18 95.9 202 38.1
Gohir.A10G140700 Gossypium hirsutum HOM05D000009 ORTHO05D000008 9.6e-13 79.0 42 90.5
SalBow8G0881 Salvia bowleyana HOM05D005526 ORTHO05D006802 2.8e-12 77.4 88 55.7
CAN.G395.47 Capsicum annuum HOM05D005526 ORTHO05D006802 2.0e-10 71.2 47 72.3
Pp3c6_24500 Physcomitrium patens HOM05D005526 ORTHO05D006802 2.2e-09 67.8 74 44.6
CARHR177930 Cardamine hirsuta HOM05D005526 ORTHO05D006802 4.2e-08 63.5 58 63.8
COL.COLO4_12895 Corchorus olitorius HOM05D005526 ORTHO05D006802 4.2e-08 63.5 30 100.0
Pp3c25_2940 Physcomitrium patens HOM05D005526 ORTHO05D311957 4.2e-08 63.5 90 44.4


User provided reference genes

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