Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aa31LG4G15310 Aethionema arabicum HOM05D005175 ORTHO05D006302 1.2e-52 209.5 104 100.0
Carub.0005s1205 Capsella rubella HOM05D005175 ORTHO05D006302 1.4e-45 186.0 110 86.4
AL5G25000 Arabidopsis lyrata HOM05D005175 ORTHO05D006302 2.1e-44 182.2 110 83.6
CARHR154650 Cardamine hirsuta HOM05D005175 ORTHO05D006302 4.6e-44 181.0 110 83.6
BcaC01g01925 Brassica carinata HOM05D005175 ORTHO05D006302 1.0e-43 179.9 106 86.8
C03p70530 Brassica napus HOM05D005175 ORTHO05D006302 1.3e-43 179.5 106 85.8
BraA06t25187Z Brassica rapa HOM05D005175 ORTHO05D006302 5.1e-43 177.6 106 85.8
A06p20990 Brassica napus HOM05D005175 ORTHO05D006302 6.6e-43 177.2 106 84.9
BolC3t19335H Brassica oleracea HOM05D005175 ORTHO05D006302 6.6e-43 177.2 106 84.9
Thhalv10002814m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 6.6e-43 177.2 108 82.4
AT3G46210 Arabidopsis thaliana HOM05D005175 ORTHO05D006302 1.6e-41 172.6 110 80.9
Sp5g15420 Schrenkiella parvula HOM05D005175 ORTHO05D006302 8.1e-41 170.2 110 80.0
THA.LOC104814772 Tarenaya hassleriana HOM05D005175 ORTHO05D006302 1.9e-37 159.1 107 75.7
Atru.chr7.2095 Acer truncatum HOM05D005175 ORTHO05D006302 3.3e-34 148.3 111 70.3
Atru.chr7.2109 Acer truncatum HOM05D005175 ORTHO05D006302 3.3e-34 148.3 111 70.3
Gohir.D13G193000 Gossypium hirsutum HOM05D005175 ORTHO05D006302 3.3e-34 148.3 110 69.1
Gohir.A13G186200 Gossypium hirsutum HOM05D005175 ORTHO05D006302 9.6e-34 146.7 110 69.1
Dinv14260 Davidia involucrata HOM05D005175 ORTHO05D006302 2.8e-33 145.2 111 68.5
Ciclev10009310m.g Citrus clementina HOM05D005175 ORTHO05D006302 8.1e-33 143.7 111 69.4
GSVIVG01035631001 Vitis vinifera HOM05D005175 ORTHO05D006302 8.1e-33 143.7 111 64.9
Gorai.013G218900 Gossypium raimondii HOM05D005175 ORTHO05D006302 1.1e-32 143.3 111 67.6
CiPaw.11G052500 Carya illinoinensis HOM05D005175 ORTHO05D006302 2.4e-32 142.1 111 68.5
Thecc.09G044300 Theobroma cacao HOM05D005175 ORTHO05D006302 2.4e-32 142.1 108 66.7
Dinv27896 Davidia involucrata HOM05D005175 ORTHO05D006302 4.0e-32 141.4 111 67.6
COL.COLO4_20965 Corchorus olitorius HOM05D005175 ORTHO05D006302 1.3e-30 136.3 108 64.8
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.3e-30 136.3 111 64.9
Haze_21802 Corylus avellana HOM05D005175 ORTHO05D006302 1.7e-30 136.0 111 65.8
Potri.018G043600 Populus trichocarpa HOM05D005175 ORTHO05D006302 2.2e-30 135.6 111 64.0
Rhsim02G0179100 Rhododendron simsii HOM05D005175 ORTHO05D006302 2.2e-30 135.6 111 66.7
Duzib150G1530 Durio zibethinus HOM05D005175 ORTHO05D006302 2.9e-30 135.2 111 65.8
RcHm_v2.0_Chr6g0306141 Rosa chinensis HOM05D005175 ORTHO05D006302 2.9e-30 135.2 102 65.7
CSS0003070 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 4.9e-30 134.4 99 65.7
CSS0010535 Camellia sinensis var. sinensis HOM05D005175 ORTHO05D006302 4.9e-30 134.4 99 65.7
Cfa013314 Carpinus fangiana HOM05D005175 ORTHO05D006302 4.9e-30 134.4 111 64.9
Eucgr.C02924 Eucalyptus grandis HOM05D005175 ORTHO05D006302 6.5e-30 134.0 111 63.1
arahy.Tifrunner.gnm1.ann1.WUZH4U Arachis hypogaea HOM05D005175 ORTHO05D006302 8.4e-30 133.7 111 63.1
Potri.006G239100 Populus trichocarpa HOM05D005175 ORTHO05D006302 8.4e-30 133.7 111 66.7
CAN.G1674.2 Capsicum annuum HOM05D005175 ORTHO05D006302 1.1e-29 133.3 111 59.5
ClCG08G012270 Citrullus lanatus HOM05D005175 ORTHO05D006302 1.1e-29 133.3 111 63.1
Sabra18G0043700 Salix brachista HOM05D005175 ORTHO05D006302 1.1e-29 133.3 109 63.3
PGR044G2490 Punica granatum HOM05D005175 ORTHO05D006302 1.4e-29 132.9 111 63.1
Sed0006550 Sechium edule HOM05D005175 ORTHO05D006302 1.4e-29 132.9 111 62.2
MELO3C011145.2 Cucumis melo HOM05D005175 ORTHO05D006302 1.9e-29 132.5 111 62.2
ECA248G2598 Erigeron canadensis HOM05D005175 ORTHO05D006302 1.9e-29 132.5 99 61.6
FvH4_2g35660 Fragaria vesca HOM05D005175 ORTHO05D006302 1.9e-29 132.5 102 63.7
QL12p029089 Quercus lobata HOM05D005175 ORTHO05D006302 1.9e-29 132.5 110 62.7
Solyc08g066700.3 Solanum lycopersicum HOM05D005175 ORTHO05D006302 1.9e-29 132.5 99 62.6
Nn7g37002 Nelumbo nucifera HOM05D005175 ORTHO05D006302 2.5e-29 132.1 111 61.3
Manes.01G107300 Manihot esculenta HOM05D005175 ORTHO05D006302 3.2e-29 131.7 106 64.2
Hund19520 Selenicereus undatus HOM05D005175 ORTHO05D006302 3.2e-29 131.7 102 65.7
MD01G1039900 Malus domestica HOM05D005175 ORTHO05D006302 5.5e-29 131.0 104 64.4
TWI32G0813 Tripterygium wilfordii HOM05D005175 ORTHO05D006302 7.1e-29 130.6 106 62.3
Peaxi162Scf00227g00213 Petunia axillaris HOM05D005175 ORTHO05D006302 9.3e-29 130.2 105 61.0
CsaV3_2G030910 Cucumis sativus L. HOM05D005175 ORTHO05D006302 1.2e-28 129.8 111 61.3
PGSC0003DMG400004310 Solanum tuberosum HOM05D005175 ORTHO05D006302 1.6e-28 129.4 103 59.2
Lj8C577G3 Lonicera japonica HOM05D005175 ORTHO05D006302 3.5e-28 128.3 99 62.6
Lj8C586G3 Lonicera japonica HOM05D005175 ORTHO05D006302 3.5e-28 128.3 99 62.6
ATR0705G208 Amborella trichopoda HOM05D005175 ORTHO05D006302 7.9e-28 127.1 112 62.5
AUR62009295 Chenopodium quinoa HOM05D005175 ORTHO05D006302 7.9e-28 127.1 101 63.4
Lsat_1_v5_gn_1_47181 Lactuca sativa HOM05D005175 ORTHO05D006302 1.8e-27 125.9 111 55.0
TPR.G26940 Trifolium pratense HOM05D005175 ORTHO05D006302 1.8e-27 125.9 111 59.5
Psat3g109920 Pisum sativum HOM05D005175 ORTHO05D006302 2.3e-27 125.6 111 59.5
CANSAT11G2394 Cannabis sativa HOM05D005175 ORTHO05D006302 3.0e-27 125.2 102 61.8
Lj2g0027256 Lotus japonicus HOM05D005175 ORTHO05D006302 3.0e-27 125.2 111 60.4
Psat3g124840 Pisum sativum HOM05D005175 ORTHO05D006302 3.0e-27 125.2 111 58.6
MD15G1311800 Malus domestica HOM05D005175 ORTHO05D006302 3.9e-27 124.8 104 62.5
Glyma.18G230900 Glycine max HOM05D005175 ORTHO05D006302 5.1e-27 124.4 111 60.4
TAR636G0460 Trochodendron aralioides HOM05D005175 ORTHO05D006302 6.7e-27 124.0 99 62.6
Medtr7g076910 Medicago truncatula HOM05D005175 ORTHO05D006302 8.7e-27 123.6 111 58.6
Ca_07899_v3 Cicer arietinum L. HOM05D005175 ORTHO05D006302 1.5e-26 122.9 111 58.6
Prupe.1G449000 Prunus persica HOM05D005175 ORTHO05D006302 1.9e-26 122.5 100 66.0
TAR626G1708 Trochodendron aralioides HOM05D005175 ORTHO05D006302 1.9e-26 122.5 99 62.6
EL10Ac2g04031 Beta vulgaris HOM05D005175 ORTHO05D006302 2.5e-26 122.1 101 62.4
HanXRQChr01g0029811 Helianthus annuus HOM05D005175 ORTHO05D006302 4.3e-26 121.3 111 55.0
Cc08_g09460 Coffea canephora HOM05D005175 ORTHO05D006302 5.7e-26 120.9 99 61.6
Lalb_Chr08g0233831 Lupinus albus HOM05D005175 ORTHO05D006302 9.6e-26 120.2 111 56.8
AUR62041709 Chenopodium quinoa HOM05D005175 ORTHO05D006302 1.3e-25 119.8 108 58.3
AUR62043392 Chenopodium quinoa HOM05D005175 ORTHO05D006302 1.3e-25 119.8 108 58.3
TAR383G0707 Trochodendron aralioides HOM05D005175 ORTHO05D006302 1.3e-25 119.8 99 59.6
Ah.15g099330 Amaranthus hybridus HOM05D005175 ORTHO05D006302 2.8e-25 118.6 101 60.4
Glyma.09G261100 Glycine max HOM05D005175 ORTHO05D006302 2.8e-25 118.6 111 59.5
DCAR_004475 Daucus carota HOM05D005175 ORTHO05D006302 4.8e-25 117.9 117 55.6
Actinidia30274 Actinidia chinensis HOM05D005175 ORTHO05D006302 9.0e-24 113.6 111 57.7
Nitab4.5_0007810g0010 Nicotiana tabacum HOM05D005175 ORTHO05D006302 1.5e-23 112.8 100 58.0
PSO566G0264 Papaver somniferum HOM05D005175 ORTHO05D006302 2.0e-23 112.5 99 55.6
PSO782G3154 Papaver somniferum HOM05D005175 ORTHO05D006302 2.0e-23 112.5 99 57.6
Phvul.008G066200 Phaseolus vulgaris HOM05D005175 ORTHO05D006302 2.6e-23 112.1 97 59.8
FAN20G1449 Fragaria x ananassa HOM05D005175 ORTHO05D006302 5.8e-23 110.9 140 45.7
Migut.A00211 Erythranthe guttata HOM05D005175 ORTHO05D006302 7.6e-23 110.5 111 55.0
Nitab4.5_0007838g0040 Nicotiana tabacum HOM05D005175 ORTHO05D006302 7.6e-23 110.5 100 57.0
MSTRG.11700 Avicennia marina HOM05D005175 ORTHO05D006302 2.2e-22 109.0 111 55.0
CDE02G3559 Ceratophyllum demersum HOM05D005175 ORTHO05D006302 2.2e-22 109.0 105 52.4
Aqoxy4G02391 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 8.4e-22 107.1 99 54.5
Psat0s4355g0080 Pisum sativum HOM05D005175 ORTHO05D006302 8.4e-22 107.1 110 54.5
SalBow4G1104 Salvia bowleyana HOM05D005175 ORTHO05D006302 1.4e-21 106.3 111 52.3
vmacro11061 Vaccinium macrocarpon HOM05D005175 ORTHO05D006302 1.9e-21 105.9 72 70.8
MBI04_g27064_MAGBIO Magnolia biondii HOM05D005175 ORTHO05D006302 4.2e-21 104.8 101 57.4
Sc09g0009230 Simmondsia chinensis HOM05D005175 ORTHO05D006302 2.1e-20 102.4 78 65.4
Duzib168G0626 Durio zibethinus HOM05D005175 ORTHO05D006302 7.9e-20 100.5 104 54.8
Pp3c4_10290 Physcomitrium patens HOM05D005175 ORTHO05D006302 7.9e-20 100.5 100 52.0
SGA_v2.0_scaffold75G25007 Striga asiatica HOM05D005175 ORTHO05D006302 2.3e-19 99.0 93 52.7
SEGI_05611 Sequoiadendron giganteum HOM05D005175 ORTHO05D006302 8.7e-19 97.1 108 45.4
Aqoxy7G01494 Aquilegia oxysepala HOM05D005175 ORTHO05D006302 1.1e-18 96.7 96 51.0
Zm00001eb210560 Zea mays HOM05D005175 ORTHO05D006302 2.8e-17 92.0 99 49.5
Os03g0854200 Oryza sativa ssp. japonica HOM05D005175 ORTHO05D006302 3.7e-17 91.7 99 48.5
Mapoly0050s0095 Marchantia polymorpha HOM05D005175 ORTHO05D006302 1.5e-15 86.3 100 48.0
HPP92_018407 Vanilla planifolia HOM05D005175 ORTHO05D006302 3.8e-14 81.6 105 43.8
Psat0s4355g0120 Pisum sativum HOM05D005175 ORTHO05D006302 1.1e-13 80.1 72 58.3
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis HOM05D005175 ORTHO05D006302 5.5e-13 77.8 102 44.1
Gorai.010G107600 Gossypium raimondii HOM05D005175 ORTHO05D006302 5.5e-13 77.8 86 52.3
Glyma.17G169500 Glycine max HOM05D005175 ORTHO05D006302 3.9e-11 71.6 48 68.8
Hma1.2p1_0049F.1_g028690 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 9.7e-10 67.0 54 66.7
Thhalv10002689m.g Eutrema salsugineum HOM05D005175 ORTHO05D006302 4.8e-09 64.7 30 90.0
Hma1.2p1_0774F.1_g216360 Hydrangea macrophylla HOM05D005175 ORTHO05D006302 1.1e-08 63.5 54 63.0
TPR.G28486 Trifolium pratense HOM05D005175 ORTHO05D006302 9.1e-08 60.5 77 50.6
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis HOM05D005175 ORTHO05D006302 8.5e-06 53.9 71 45.1


User provided reference genes

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