Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62043732 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.3e-66 255.4 126 100.0
AUR62018029 Chenopodium quinoa HOM05D006139 ORTHO05D007681 7.8e-46 187.2 92 100.0
Hund19684 Selenicereus undatus HOM05D006139 ORTHO05D007681 7.6e-33 144.1 92 73.9
TWI38G2388 Tripterygium wilfordii HOM05D006139 ORTHO05D007681 1.3e-32 143.3 92 70.7
QL10p044141 Quercus lobata HOM05D006139 ORTHO05D007681 4.9e-32 141.4 92 71.7
Thecc.07G123700 Theobroma cacao HOM05D006139 ORTHO05D007681 8.4e-32 140.6 92 69.6
Gohir.D01G041500 Gossypium hirsutum HOM05D006139 ORTHO05D007681 1.9e-31 139.4 92 71.7
Dinv44237 Davidia involucrata HOM05D006139 ORTHO05D007681 3.2e-31 138.7 92 69.6
Hma1.2p1_0412F.1_g147150 Hydrangea macrophylla HOM05D006139 ORTHO05D007681 5.4e-31 137.9 92 69.6
THA.LOC104812308 Tarenaya hassleriana HOM05D006139 ORTHO05D007681 7.1e-31 137.5 92 68.5
Duzib213G0841 Durio zibethinus HOM05D006139 ORTHO05D007681 9.2e-31 137.1 92 69.6
Gohir.A01G052100 Gossypium hirsutum HOM05D006139 ORTHO05D007681 9.2e-31 137.1 92 69.6
Potri.011G107400 Populus trichocarpa HOM05D006139 ORTHO05D007681 1.6e-30 136.3 92 69.6
Sabra11G0095200 Salix brachista HOM05D006139 ORTHO05D007681 1.6e-30 136.3 92 69.6
Oeu013397.2 Olea europaea HOM05D006139 ORTHO05D007681 2.7e-30 135.6 92 68.5
Prupe.1G178000 Prunus persica HOM05D006139 ORTHO05D007681 2.7e-30 135.6 92 66.3
MELO3C017678.2 Cucumis melo HOM05D006139 ORTHO05D007681 3.5e-30 135.2 92 69.6
Eucgr.F03241 Eucalyptus grandis HOM05D006139 ORTHO05D007681 4.6e-30 134.8 92 67.4
Gorai.002G052100 Gossypium raimondii HOM05D006139 ORTHO05D007681 4.6e-30 134.8 92 68.5
Atru.chr2.2052 Acer truncatum HOM05D006139 ORTHO05D007681 6.0e-30 134.4 92 66.3
Thhalv10007085m.g Eutrema salsugineum HOM05D006139 ORTHO05D007681 1.0e-29 133.7 101 61.4
Manes.03G099000 Manihot esculenta HOM05D006139 ORTHO05D007681 1.0e-29 133.7 92 66.3
Nitab4.5_0001687g0050 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.0e-29 133.7 92 66.3
Sc22g0003230 Simmondsia chinensis HOM05D006139 ORTHO05D007681 1.0e-29 133.7 98 64.3
COL.COLO4_17513 Corchorus olitorius HOM05D006139 ORTHO05D007681 1.3e-29 133.3 92 70.7
MD13G1278700 Malus domestica HOM05D006139 ORTHO05D007681 1.3e-29 133.3 92 66.3
Ciclev10019318m.g Citrus clementina HOM05D006139 ORTHO05D007681 2.3e-29 132.5 92 66.3
CsaV3_4G003770 Cucumis sativus L. HOM05D006139 ORTHO05D007681 3.9e-29 131.7 92 67.4
Sed0017452 Sechium edule HOM05D006139 ORTHO05D007681 3.9e-29 131.7 92 65.2
CAN.G710.40 Capsicum annuum HOM05D006139 ORTHO05D007681 6.6e-29 131.0 92 66.3
A06p12870 Brassica napus HOM05D006139 ORTHO05D007681 8.6e-29 130.6 101 60.4
BraA06t24447Z Brassica rapa HOM05D006139 ORTHO05D007681 8.6e-29 130.6 101 60.4
Sp1g15110 Schrenkiella parvula HOM05D006139 ORTHO05D007681 1.1e-28 130.2 101 60.4
TAR365G1167 Trochodendron aralioides HOM05D006139 ORTHO05D007681 1.1e-28 130.2 92 66.3
CANSAT11G1108 Cannabis sativa HOM05D006139 ORTHO05D007681 1.5e-28 129.8 92 66.3
Lalb_Chr06g0164661 Lupinus albus HOM05D006139 ORTHO05D007681 1.9e-28 129.4 100 64.0
arahy.Tifrunner.gnm1.ann1.JAL8JD Arachis hypogaea HOM05D006139 ORTHO05D007681 2.5e-28 129.0 94 64.9
Cc03_g10570 Coffea canephora HOM05D006139 ORTHO05D007681 2.5e-28 129.0 92 68.5
RcHm_v2.0_Chr4g0409801 Rosa chinensis HOM05D006139 ORTHO05D007681 2.5e-28 129.0 92 66.3
GSVIVG01031668001 Vitis vinifera HOM05D006139 ORTHO05D007681 2.5e-28 129.0 92 68.5
arahy.Tifrunner.gnm1.ann1.46LBLY Arachis hypogaea HOM05D006139 ORTHO05D007681 4.3e-28 128.3 94 63.8
BcaC05g25552 Brassica carinata HOM05D006139 ORTHO05D007681 5.6e-28 127.9 101 58.4
BolC5t30234H Brassica oleracea HOM05D006139 ORTHO05D007681 5.6e-28 127.9 101 58.4
FvH4_4g12150 Fragaria vesca HOM05D006139 ORTHO05D007681 5.6e-28 127.9 92 65.2
Sopen09g036170 Solanum pennellii HOM05D006139 ORTHO05D007681 7.3e-28 127.5 92 65.2
CiPaw.01G108300 Carya illinoinensis HOM05D006139 ORTHO05D007681 9.6e-28 127.1 92 67.4
Solyc09g098230.3 Solanum lycopersicum HOM05D006139 ORTHO05D007681 9.6e-28 127.1 92 64.1
C05p15280 Brassica napus HOM05D006139 ORTHO05D007681 1.2e-27 126.7 101 58.4
FAN12G2778 Fragaria x ananassa HOM05D006139 ORTHO05D007681 1.2e-27 126.7 98 60.2
Lj5g0023092 Lotus japonicus HOM05D006139 ORTHO05D007681 1.2e-27 126.7 99 61.6
BcaB02g06659 Brassica carinata HOM05D006139 ORTHO05D007681 1.6e-27 126.3 101 58.4
Haze_11079 Corylus avellana HOM05D006139 ORTHO05D007681 1.6e-27 126.3 83 71.1
AT1G16970 Arabidopsis thaliana HOM05D006139 ORTHO05D007681 3.6e-27 125.2 102 59.8
Migut.N00440 Erythranthe guttata HOM05D006139 ORTHO05D007681 3.6e-27 125.2 92 64.1
Carub.0001s1670 Capsella rubella HOM05D006139 ORTHO05D007681 6.2e-27 124.4 102 59.8
FAN12G0395 Fragaria x ananassa HOM05D006139 ORTHO05D007681 8.1e-27 124.0 92 64.1
Psat6g243280 Pisum sativum HOM05D006139 ORTHO05D007681 8.1e-27 124.0 92 62.0
MSTRG.17865 Avicennia marina HOM05D006139 ORTHO05D007681 1.1e-26 123.6 92 65.2
CSS0045945 Camellia sinensis var. sinensis HOM05D006139 ORTHO05D007681 1.8e-26 122.9 92 62.0
VMungo0720G1636 Vigna mungo HOM05D006139 ORTHO05D007681 3.1e-26 122.1 102 59.8
FAN17G0552 Fragaria x ananassa HOM05D006139 ORTHO05D007681 4.0e-26 121.7 92 63.0
SGA_v2.0_scaffold109G31142 Striga asiatica HOM05D006139 ORTHO05D007681 4.0e-26 121.7 104 57.7
CARHR017480 Cardamine hirsuta HOM05D006139 ORTHO05D007681 6.8e-26 120.9 101 57.4
Aqoxy2G03950 Aquilegia oxysepala HOM05D006139 ORTHO05D007681 8.9e-26 120.6 92 63.0
Glyma.20G248800 Glycine max HOM05D006139 ORTHO05D007681 8.9e-26 120.6 94 62.8
Lj4A728T41 Lonicera japonica HOM05D006139 ORTHO05D007681 1.2e-25 120.2 84 66.7
PSO675G6876 Papaver somniferum HOM05D006139 ORTHO05D007681 2.0e-25 119.4 92 60.9
ECA246G3778 Erigeron canadensis HOM05D006139 ORTHO05D007681 2.6e-25 119.0 93 59.1
PSO017G2886 Papaver somniferum HOM05D006139 ORTHO05D007681 3.4e-25 118.6 92 59.8
FAN07G2792 Fragaria x ananassa HOM05D006139 ORTHO05D007681 5.8e-25 117.9 103 57.3
Rhsim07G0086500 Rhododendron simsii HOM05D006139 ORTHO05D007681 7.6e-25 117.5 84 64.3
vmacro13984 Vaccinium macrocarpon HOM05D006139 ORTHO05D007681 7.6e-25 117.5 84 64.3
Lsat_1_v5_gn_3_24941 Lactuca sativa HOM05D006139 ORTHO05D007681 9.9e-25 117.1 98 53.1
DCAR_005495 Daucus carota HOM05D006139 ORTHO05D007681 1.3e-24 116.7 80 67.5
Medtr1g116980 Medicago truncatula HOM05D006139 ORTHO05D007681 1.3e-24 116.7 94 60.6
TPR.G8868 Trifolium pratense HOM05D006139 ORTHO05D007681 1.3e-24 116.7 85 63.5
PGR031G2404 Punica granatum HOM05D006139 ORTHO05D007681 1.7e-24 116.3 93 61.3
MBI07_g00628_MAGBIO Magnolia biondii HOM05D006139 ORTHO05D007681 2.2e-24 115.9 92 58.7
Phvul.007G001600 Phaseolus vulgaris HOM05D006139 ORTHO05D007681 4.9e-24 114.8 101 57.4
Nn3g20967 Nelumbo nucifera HOM05D006139 ORTHO05D007681 8.4e-24 114.0 92 58.7
ClCG07G016640 Citrullus lanatus HOM05D006139 ORTHO05D007681 1.4e-23 113.2 84 64.3
Cpa.g.sc77.50 Carica papaya HOM05D006139 ORTHO05D007681 1.9e-23 112.8 77 66.2
Zm00001eb116810 Zea mays HOM05D006139 ORTHO05D007681 5.4e-23 111.3 92 54.3
Ca_11423_v3 Cicer arietinum L. HOM05D006139 ORTHO05D007681 1.6e-22 109.8 107 49.5
Peaxi162Scf00286g00443 Petunia axillaris HOM05D006139 ORTHO05D007681 3.3e-20 102.1 72 65.3
ATR0609G005 Amborella trichopoda HOM05D006139 ORTHO05D007681 7.3e-20 100.9 81 58.0
unitig_578.g15953 Utricularia gibba HOM05D006139 ORTHO05D007681 7.3e-20 100.9 86 57.0
AUR62003718 Chenopodium quinoa HOM05D006139 ORTHO05D007681 2.6e-17 92.4 45 97.8
Mapoly0113s0020 Marchantia polymorpha HOM05D006139 ORTHO05D007681 7.4e-12 74.3 93 39.8
Hund20183 Selenicereus undatus HOM05D006139 ORTHO05D007681 1.6e-11 73.2 45 73.3
SHI27652 Sapria himalayana HOM05D006139 ORTHO05D007681 4.0e-10 68.6 60 50.0
Ah.03g143010 Amaranthus hybridus HOM05D006139 ORTHO05D007681 1.2e-09 67.0 41 75.6
Nitab4.5_0001526g0130 Nicotiana tabacum HOM05D006139 ORTHO05D007681 1.3e-08 63.5 54 53.7
CBR_g19434 Chara braunii HOM05D006139 ORTHO05D007681 1.9e-07 59.7 58 44.8
SEGI_35314 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 5.5e-07 58.2 59 47.5
SEGI_11325 Sequoiadendron giganteum HOM05D006139 ORTHO05D007681 1.2e-06 57.0 47 55.3
Pp3c18_7140 Physcomitrium patens HOM05D006139 ORTHO05D007681 2.7e-06 55.8 96 32.3


User provided reference genes

Program Settings