Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62039632 Chenopodium quinoa HOM05D006371 ORTHO05D008309 0.0e+00 1813.5 911 100.0
AUR62040011 Chenopodium quinoa HOM05D006371 ORTHO05D008309 0.0e+00 1593.2 887 91.5
EL10Ac6g13348 Beta vulgaris HOM05D006371 ORTHO05D008309 0.0e+00 1394.0 943 76.8
Ah.02g129050 Amaranthus hybridus HOM05D006371 ORTHO05D008309 0.0e+00 1239.6 874 75.1
Hund03659 Selenicereus undatus HOM05D006371 ORTHO05D008309 6.2e-310 1067.4 964 60.7
Sc07g0001260 Simmondsia chinensis HOM05D006371 ORTHO05D008309 1.4e-293 1013.1 948 60.5
Hund03661 Selenicereus undatus HOM05D006371 ORTHO05D008309 1.3e-278 963.4 986 56.1
Dinv40160 Davidia involucrata HOM05D006371 ORTHO05D008309 8.4e-275 950.7 954 57.3
Actinidia02362 Actinidia chinensis HOM05D006371 ORTHO05D008309 2.3e-272 942.6 946 55.4
CiPaw.03G283700 Carya illinoinensis HOM05D006371 ORTHO05D008309 9.0e-261 904.0 978 54.1
Ciclev10014166m.g Citrus clementina HOM05D006371 ORTHO05D008309 1.7e-259 899.8 963 55.5
QL04p067039 Quercus lobata HOM05D006371 ORTHO05D008309 6.5e-259 897.9 967 53.9
Migut.D00896 Erythranthe guttata HOM05D006371 ORTHO05D008309 1.4e-258 896.7 946 55.3
RcHm_v2.0_Chr2g0155641 Rosa chinensis HOM05D006371 ORTHO05D008309 3.2e-258 895.6 950 56.1
Cfa014202 Carpinus fangiana HOM05D006371 ORTHO05D008309 2.7e-257 892.5 971 53.9
Gohir.A11G148000 Gossypium hirsutum HOM05D006371 ORTHO05D008309 8.7e-256 887.5 959 55.5
CSS0032100 Camellia sinensis var. sinensis HOM05D006371 ORTHO05D008309 1.1e-255 887.1 800 60.9
Nn1g07560 Nelumbo nucifera HOM05D006371 ORTHO05D008309 1.5e-255 886.7 968 54.4
FAN05G5438 Fragaria x ananassa HOM05D006371 ORTHO05D008309 4.3e-255 885.2 950 55.1
Gorai.007G165100 Gossypium raimondii HOM05D006371 ORTHO05D008309 5.7e-255 884.8 955 55.8
Manes.12G064500 Manihot esculenta HOM05D006371 ORTHO05D008309 7.4e-255 884.4 963 54.4
Duzib133G1082 Durio zibethinus HOM05D006371 ORTHO05D008309 1.3e-254 883.6 959 54.5
FAN14G0004 Fragaria x ananassa HOM05D006371 ORTHO05D008309 8.2e-254 880.9 949 54.9
FvH4_6g40410 Fragaria vesca HOM05D006371 ORTHO05D008309 1.4e-253 880.2 949 54.9
Prupe.3G194900 Prunus persica HOM05D006371 ORTHO05D008309 6.9e-253 877.9 952 53.5
Gohir.D11G154800 Gossypium hirsutum HOM05D006371 ORTHO05D008309 1.2e-252 877.1 959 55.4
FAN02G4613 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.5e-252 876.7 954 54.8
Duzib211G0069 Durio zibethinus HOM05D006371 ORTHO05D008309 5.9e-252 874.8 960 55.2
TWI36G0955 Tripterygium wilfordii HOM05D006371 ORTHO05D008309 1.3e-251 873.6 960 53.5
MD09G1130200 Malus domestica HOM05D006371 ORTHO05D008309 3.8e-251 872.1 948 54.0
FAN09G0519 Fragaria x ananassa HOM05D006371 ORTHO05D008309 1.9e-250 869.8 951 54.8
CANSAT64G2089 Cannabis sativa HOM05D006371 ORTHO05D008309 2.5e-250 869.4 818 61.1
Cc07_g11500 Coffea canephora HOM05D006371 ORTHO05D008309 5.5e-250 868.2 957 53.8
Potri.014G170300 Populus trichocarpa HOM05D006371 ORTHO05D008309 7.2e-250 867.8 964 53.4
GSVIVG01030124001 Vitis vinifera HOM05D006371 ORTHO05D008309 9.3e-250 867.5 723 65.6
Eucgr.A01367 Eucalyptus grandis HOM05D006371 ORTHO05D008309 5.1e-248 861.7 973 52.4
MELO3C024185.2 Cucumis melo HOM05D006371 ORTHO05D008309 6.7e-248 861.3 817 59.5
Sabra14G0129800 Salix brachista HOM05D006371 ORTHO05D008309 2.5e-247 859.4 965 53.4
Glyma.14G190200 Glycine max HOM05D006371 ORTHO05D008309 4.3e-247 858.6 852 58.7
arahy.Tifrunner.gnm1.ann1.BM1T67 Arachis hypogaea HOM05D006371 ORTHO05D008309 7.4e-247 857.8 821 59.7
Lalb_Chr04g0252451 Lupinus albus HOM05D006371 ORTHO05D008309 7.4e-247 857.8 758 62.8
PGR031G1410 Punica granatum HOM05D006371 ORTHO05D008309 7.4e-247 857.8 969 52.7
arahy.Tifrunner.gnm1.ann1.YIC3VW Arachis hypogaea HOM05D006371 ORTHO05D008309 9.7e-247 857.4 816 59.9
LjContig00155g0006571 Lotus japonicus HOM05D006371 ORTHO05D008309 1.3e-246 857.1 797 61.0
SalBow7G3887 Salvia bowleyana HOM05D006371 ORTHO05D008309 2.2e-246 856.3 871 57.3
Dinv08538 Davidia involucrata HOM05D006371 ORTHO05D008309 2.8e-246 855.9 903 55.7
CsaV3_2G010080 Cucumis sativus L. HOM05D006371 ORTHO05D008309 8.2e-246 854.4 813 59.3
PSO675G4792 Papaver somniferum HOM05D006371 ORTHO05D008309 1.4e-245 853.6 763 61.5
PSO541G0072 Papaver somniferum HOM05D006371 ORTHO05D008309 9.1e-245 850.9 764 61.8
Sed0018275 Sechium edule HOM05D006371 ORTHO05D008309 1.2e-244 850.5 796 60.7
Glyma.02G223400 Glycine max HOM05D006371 ORTHO05D008309 7.7e-244 847.8 851 58.4
THA.LOC104808834 Tarenaya hassleriana HOM05D006371 ORTHO05D008309 1.3e-243 847.0 773 60.7
Solyc02g083140.3 Solanum lycopersicum HOM05D006371 ORTHO05D008309 6.5e-243 844.7 967 51.0
PGSC0003DMG400001545 Solanum tuberosum HOM05D006371 ORTHO05D008309 1.9e-242 843.2 911 53.2
MSTRG.10896 Avicennia marina HOM05D006371 ORTHO05D008309 6.1e-241 838.2 731 62.1
COL.COLO4_19652 Corchorus olitorius HOM05D006371 ORTHO05D008309 2.3e-240 836.3 950 53.1
BcaC06g35860 Brassica carinata HOM05D006371 ORTHO05D008309 5.1e-240 835.1 782 59.6
Lj4C228G6 Lonicera japonica HOM05D006371 ORTHO05D008309 5.1e-240 835.1 996 51.2
BcaB06g26772 Brassica carinata HOM05D006371 ORTHO05D008309 1.5e-239 833.6 775 60.5
A07p06760 Brassica napus HOM05D006371 ORTHO05D008309 2.0e-239 833.2 774 60.2
Sopen02g027900 Solanum pennellii HOM05D006371 ORTHO05D008309 3.3e-239 832.4 914 53.0
Sp3g23150 Schrenkiella parvula HOM05D006371 ORTHO05D008309 9.7e-239 830.9 754 61.0
BolC7t41483H Brassica oleracea HOM05D006371 ORTHO05D008309 1.3e-238 830.5 783 59.5
BraA07t28469Z Brassica rapa HOM05D006371 ORTHO05D008309 1.3e-238 830.5 783 59.5
C07p10340 Brassica napus HOM05D006371 ORTHO05D008309 4.8e-238 828.6 783 59.4
Aqoxy3G02224 Aquilegia oxysepala HOM05D006371 ORTHO05D008309 6.3e-238 828.2 811 58.0
AL3G41970 Arabidopsis lyrata HOM05D006371 ORTHO05D008309 1.1e-237 827.4 775 60.6
Carub.0003s2599 Capsella rubella HOM05D006371 ORTHO05D008309 1.8e-237 826.6 741 61.7
CARHR102110 Cardamine hirsuta HOM05D006371 ORTHO05D008309 1.8e-237 826.6 742 61.7
Thhalv10002385m.g Eutrema salsugineum HOM05D006371 ORTHO05D008309 2.4e-237 826.2 773 60.7
AT2G04270 Arabidopsis thaliana HOM05D006371 ORTHO05D008309 5.9e-236 821.6 715 64.2
Aa31sc575G10 Aethionema arabicum HOM05D006371 ORTHO05D008309 1.7e-235 820.1 756 61.0
Peaxi162Scf00300g00515 Petunia axillaris HOM05D006371 ORTHO05D008309 1.7e-235 820.1 983 50.5
HanXRQChr09g0256951 Helianthus annuus HOM05D006371 ORTHO05D008309 6.5e-235 818.1 906 53.3
CAN.G890.8 Capsicum annuum HOM05D006371 ORTHO05D008309 8.5e-235 817.8 690 63.8
TAR627G0565 Trochodendron aralioides HOM05D006371 ORTHO05D008309 8.5e-235 817.8 883 53.8
ATR0751G221 Amborella trichopoda HOM05D006371 ORTHO05D008309 3.2e-234 815.8 992 50.2
ECA232G0409 Erigeron canadensis HOM05D006371 ORTHO05D008309 1.6e-233 813.5 924 52.7
Ca_05557_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.3e-231 805.8 733 59.5
Lsat_1_v5_gn_4_142580 Lactuca sativa HOM05D006371 ORTHO05D008309 7.4e-231 804.7 852 54.6
TPR.G13852 Trifolium pratense HOM05D006371 ORTHO05D008309 2.4e-229 799.7 757 58.5
Thecc.01G199300 Theobroma cacao HOM05D006371 ORTHO05D008309 1.7e-227 793.5 955 51.9
Nitab4.5_0005413g0050 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.7e-225 786.2 906 51.8
ECA238G3451 Erigeron canadensis HOM05D006371 ORTHO05D008309 3.3e-223 779.2 839 54.7
Psat2g060760 Pisum sativum HOM05D006371 ORTHO05D008309 2.8e-222 776.2 804 55.6
HPP92_003032 Vanilla planifolia HOM05D006371 ORTHO05D008309 1.5e-215 753.8 776 55.2
Zm00001eb038720 Zea mays HOM05D006371 ORTHO05D008309 1.5e-215 753.8 665 60.6
Os08g0323600 Oryza sativa ssp. japonica HOM05D006371 ORTHO05D008309 2.0e-215 753.4 680 59.1
Medtr5g069430 Medicago truncatula HOM05D006371 ORTHO05D008309 2.7e-212 743.0 811 54.1
SGA_v2.0_scaffold68G22808 Striga asiatica HOM05D006371 ORTHO05D008309 1.1e-210 737.6 973 47.4
Cpa.g.sc136.51 Carica papaya HOM05D006371 ORTHO05D008309 3.3e-210 736.1 558 68.6
Oeu049652.2 Olea europaea HOM05D006371 ORTHO05D008309 1.8e-205 720.3 834 52.0
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 7.5e-199 698.4 660 59.8
ClCG02G003000 Citrullus lanatus HOM05D006371 ORTHO05D008309 4.3e-170 602.8 631 56.1
MBI15_g38530_MAGBIO Magnolia biondii HOM05D006371 ORTHO05D008309 3.6e-169 599.7 598 56.5
Hma1.2p1_0315F.1_g122770 Hydrangea macrophylla HOM05D006371 ORTHO05D008309 3.8e-166 589.7 725 50.3
Phvul.008G190000 Phaseolus vulgaris HOM05D006371 ORTHO05D008309 1.2e-164 584.7 661 53.0
Mapoly0111s0056 Marchantia polymorpha HOM05D006371 ORTHO05D008309 3.6e-161 573.2 738 45.1
vmacro20507 Vaccinium macrocarpon HOM05D006371 ORTHO05D008309 4.8e-161 572.8 1010 40.0
AUR62026198 Chenopodium quinoa HOM05D006371 ORTHO05D008309 1.4e-160 571.2 611 56.8
CDE02G2282 Ceratophyllum demersum HOM05D006371 ORTHO05D008309 1.6e-153 547.7 560 55.7
Nitab4.5_0023804g0010 Nicotiana tabacum HOM05D006371 ORTHO05D008309 2.1e-153 547.4 701 48.5
DCAR_023137 Daucus carota HOM05D006371 ORTHO05D008309 2.0e-151 540.8 724 47.8
Pp3c4_14910 Physcomitrium patens HOM05D006371 ORTHO05D008309 3.3e-146 523.5 729 42.7
Atru.chr6.3429 Acer truncatum HOM05D006371 ORTHO05D008309 1.3e-139 501.5 701 45.6
Rhsim10G0203500 Rhododendron simsii HOM05D006371 ORTHO05D008309 4.3e-138 496.5 972 37.8
AagrBONN_evm.TU.Sc2ySwM_368.983 Anthoceros agrestis HOM05D006371 ORTHO05D008309 5.0e-134 483.0 658 44.7
SMO117G0275 Selaginella moellendorffii HOM05D006371 ORTHO05D008309 3.0e-131 473.8 522 51.1
Haze_12588 Corylus avellana HOM05D006371 ORTHO05D008309 1.4e-120 438.3 668 42.5
Haze_12589 Corylus avellana HOM05D006371 ORTHO05D008309 1.3e-86 325.5 417 48.7
SEGI_21719 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.9e-64 251.9 217 60.4
Ca_28887_v3 Cicer arietinum L. HOM05D006371 ORTHO05D008309 3.8e-49 201.1 432 31.2
MD17G1105600 Malus domestica HOM05D006371 ORTHO05D008309 8.7e-46 189.9 197 56.9
MCO12G287 Micromonas commoda HOM05D006371 ORTHO05D008309 4.2e-40 171.0 342 32.7
CBR_g28919 Chara braunii HOM05D006371 ORTHO05D000048 2.7e-23 115.2 114 52.6
SEGI_30134 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 3.9e-22 111.3 268 33.6
SEGI_19700 Sequoiadendron giganteum HOM05D006371 ORTHO05D008309 1.4e-19 102.8 74 67.6
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.6e-18 98.6 138 47.8
CBR_g28922 Chara braunii HOM05D000019 ORTHO05D000048 7.2e-16 90.5 290 27.9
CBR_g28910 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-15 88.6 97 52.6
MD17G1105400 Malus domestica HOM05D006371 ORTHO05D008309 6.3e-12 77.4 83 51.8
AUR62026201 Chenopodium quinoa HOM05D006371 ORTHO05D008309 7.7e-10 70.5 38 94.7
MD17G1105500 Malus domestica HOM05D006371 ORTHO05D008309 7.7e-10 70.5 41 85.4


User provided reference genes

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