Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62025819 Chenopodium quinoa HOM05D005387 ORTHO05D006711 1.3e-108 396.4 195 100.0
AUR62044240 Chenopodium quinoa HOM05D005387 ORTHO05D006711 4.4e-64 248.4 163 80.4
AUR62034034 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.7e-63 245.4 161 80.1
AUR62044203 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.7e-63 245.4 161 80.1
EL10Ac6g13926 Beta vulgaris HOM05D005387 ORTHO05D006711 6.4e-63 244.6 132 93.2
AUR62044301 Chenopodium quinoa HOM05D005387 ORTHO05D006711 9.2e-62 240.7 163 78.5
QL12p022031 Quercus lobata HOM05D005387 ORTHO05D006711 6.6e-60 234.6 152 78.9
Hund03003 Selenicereus undatus HOM05D005387 ORTHO05D006711 6.6e-60 234.6 163 76.1
CSS0042122 Camellia sinensis var. sinensis HOM05D005387 ORTHO05D006711 2.5e-59 232.6 152 77.6
MBI18_g32210_MAGBIO Magnolia biondii HOM05D005387 ORTHO05D006711 4.3e-59 231.9 152 77.6
CANSAT25G2972 Cannabis sativa HOM05D005387 ORTHO05D006711 5.6e-59 231.5 151 78.1
TAR362G0175 Trochodendron aralioides HOM05D005387 ORTHO05D006711 5.6e-59 231.5 152 77.6
Dinv34746 Davidia involucrata HOM05D005387 ORTHO05D006711 7.3e-59 231.1 152 78.3
Potri.002G054000 Populus trichocarpa HOM05D005387 ORTHO05D006711 7.3e-59 231.1 151 78.1
ClCG09G006960 Citrullus lanatus HOM05D005387 ORTHO05D006711 9.5e-59 230.7 150 78.7
SalBow4G1053 Salvia bowleyana HOM05D005387 ORTHO05D006711 9.5e-59 230.7 152 78.3
Sed0006598 Sechium edule HOM05D005387 ORTHO05D006711 9.5e-59 230.7 150 78.7
CiPaw.07G092300 Carya illinoinensis HOM05D005387 ORTHO05D006711 1.2e-58 230.3 152 77.6
Sabra02G0043900 Salix brachista HOM05D005387 ORTHO05D006711 1.6e-58 229.9 131 87.8
Cfa006132 Carpinus fangiana HOM05D005387 ORTHO05D006711 2.1e-58 229.6 151 78.1
Haze_04719 Corylus avellana HOM05D005387 ORTHO05D006711 2.1e-58 229.6 151 78.1
CsaV3_7G028200 Cucumis sativus L. HOM05D005387 ORTHO05D006711 2.1e-58 229.6 150 78.0
Hma1.2p1_0257F.1_g103540 Hydrangea macrophylla HOM05D005387 ORTHO05D006711 2.1e-58 229.6 156 75.6
Lj2A1174G27 Lonicera japonica HOM05D005387 ORTHO05D006711 2.1e-58 229.6 163 73.6
Migut.D00288 Erythranthe guttata HOM05D005387 ORTHO05D006711 2.8e-58 229.2 152 77.0
vmacro02566 Vaccinium macrocarpon HOM05D005387 ORTHO05D006711 3.6e-58 228.8 152 77.0
GSVIVG01011125001 Vitis vinifera HOM05D005387 ORTHO05D006711 3.6e-58 228.8 152 76.3
MELO3C015844.2 Cucumis melo HOM05D005387 ORTHO05D006711 4.7e-58 228.4 150 77.3
Lj2g0021203 Lotus japonicus HOM05D005387 ORTHO05D006711 4.7e-58 228.4 149 77.9
TWI23G0758 Tripterygium wilfordii HOM05D005387 ORTHO05D006711 4.7e-58 228.4 151 76.2
Oeu015966.1 Olea europaea HOM05D005387 ORTHO05D006711 6.2e-58 228.0 152 76.3
Rhsim13G0024300 Rhododendron simsii HOM05D005387 ORTHO05D006711 6.2e-58 228.0 152 77.0
Ciclev10018975m.g Citrus clementina HOM05D005387 ORTHO05D006711 8.0e-58 227.6 151 76.8
Aqoxy5G00512 Aquilegia oxysepala HOM05D005387 ORTHO05D006711 1.1e-57 227.3 150 77.3
VMungo0464G1141 Vigna mungo HOM05D005387 ORTHO05D006711 1.1e-57 227.3 163 72.4
Eucgr.K03375 Eucalyptus grandis HOM05D005387 ORTHO05D006711 1.4e-57 226.9 151 76.2
Manes.05G075500 Manihot esculenta HOM05D005387 ORTHO05D006711 1.4e-57 226.9 163 72.4
Sp1g02210 Schrenkiella parvula HOM05D005387 ORTHO05D006711 1.4e-57 226.9 163 71.8
BcaC07g36978 Brassica carinata HOM05D005387 ORTHO05D006711 1.8e-57 226.5 163 71.8
A08p37430 Brassica napus HOM05D005387 ORTHO05D006711 1.8e-57 226.5 163 71.8
C08p00480 Brassica napus HOM05D005387 ORTHO05D006711 1.8e-57 226.5 163 71.8
BolC8t46846H Brassica oleracea HOM05D005387 ORTHO05D006711 1.8e-57 226.5 163 71.8
BraA08t35641Z Brassica rapa HOM05D005387 ORTHO05D006711 1.8e-57 226.5 163 71.8
Carub.0001s0233 Capsella rubella HOM05D005387 ORTHO05D006711 1.8e-57 226.5 150 76.0
Phvul.004G095600 Phaseolus vulgaris HOM05D005387 ORTHO05D006711 2.3e-57 226.1 163 72.4
MD03G1266200 Malus domestica HOM05D005387 ORTHO05D006711 3.1e-57 225.7 150 78.7
SHI14548 Sapria himalayana HOM05D005387 ORTHO05D006711 3.1e-57 225.7 151 77.5
Thhalv10006888m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 4.0e-57 225.3 150 76.0
Glyma.16G167800 Glycine max HOM05D005387 ORTHO05D006711 4.0e-57 225.3 163 71.8
Medtr2g084735 Medicago truncatula HOM05D005387 ORTHO05D006711 4.0e-57 225.3 149 76.5
PGR044G0219 Punica granatum HOM05D005387 ORTHO05D006711 4.0e-57 225.3 153 74.5
Thecc.01G280400 Theobroma cacao HOM05D005387 ORTHO05D006711 4.0e-57 225.3 152 76.3
Cc01_g19560 Coffea canephora HOM05D005387 ORTHO05D006711 5.2e-57 224.9 151 76.2
CDE06G0365 Ceratophyllum demersum HOM05D005387 ORTHO05D006711 6.8e-57 224.6 153 73.9
Gohir.A11G122400 Gossypium hirsutum HOM05D005387 ORTHO05D006711 8.9e-57 224.2 163 71.8
Gorai.007G136500 Gossypium raimondii HOM05D005387 ORTHO05D006711 8.9e-57 224.2 163 71.8
Aa31LG1G9340 Aethionema arabicum HOM05D005387 ORTHO05D006711 1.2e-56 223.8 164 72.6
Gohir.D11G127700 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.2e-56 223.8 163 71.8
TPR.G36709 Trifolium pratense HOM05D005387 ORTHO05D006711 1.2e-56 223.8 149 76.5
FvH4_2g23690 Fragaria vesca HOM05D005387 ORTHO05D006711 1.5e-56 223.4 164 71.3
FAN24G0367 Fragaria x ananassa HOM05D005387 ORTHO05D006711 1.5e-56 223.4 164 71.3
RcHm_v2.0_Chr6g0291151 Rosa chinensis HOM05D005387 ORTHO05D006711 1.5e-56 223.4 153 74.5
Duzib211G0289 Durio zibethinus HOM05D005387 ORTHO05D006711 2.0e-56 223.0 152 75.0
PSO210G3721 Papaver somniferum HOM05D005387 ORTHO05D006711 2.0e-56 223.0 149 75.8
PSO832G0722 Papaver somniferum HOM05D005387 ORTHO05D006711 2.0e-56 223.0 149 75.8
Actinidia09142 Actinidia chinensis HOM05D005387 ORTHO05D006711 2.6e-56 222.6 151 74.8
Glyma.02G082200 Glycine max HOM05D005387 ORTHO05D006711 2.6e-56 222.6 150 74.7
Nitab4.5_0006390g0070 Nicotiana tabacum HOM05D005387 ORTHO05D006711 2.6e-56 222.6 152 75.0
Solyc06g008970.4 Solanum lycopersicum HOM05D005387 ORTHO05D006711 2.6e-56 222.6 152 75.0
Sopen06g003750 Solanum pennellii HOM05D005387 ORTHO05D006711 2.6e-56 222.6 152 75.0
AL1G12680 Arabidopsis lyrata HOM05D005387 ORTHO05D006711 3.4e-56 222.2 150 74.7
AT1G03190 Arabidopsis thaliana HOM05D005387 ORTHO05D006711 3.4e-56 222.2 150 74.7
Ca_24177_v3 Cicer arietinum L. HOM05D002851 ORTHO05D003084 3.4e-56 222.2 118 91.5
Nn4g26234 Nelumbo nucifera HOM05D005387 ORTHO05D006711 3.4e-56 222.2 149 75.2
ATR0626G059 Amborella trichopoda HOM05D005387 ORTHO05D006711 7.5e-56 221.1 150 76.7
FAN15G0991 Fragaria x ananassa HOM05D005387 ORTHO05D006711 9.8e-56 220.7 153 73.2
HanXRQChr10g0282751 Helianthus annuus HOM05D005387 ORTHO05D006711 9.8e-56 220.7 150 76.0
CAN.G1006.14 Capsicum annuum HOM05D005387 ORTHO05D006711 1.3e-55 220.3 152 74.3
Psat1g104680 Pisum sativum HOM05D005387 ORTHO05D006711 1.3e-55 220.3 150 76.0
Gohir.A08G068200 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.7e-55 219.9 121 88.4
Gohir.D08G076600 Gossypium hirsutum HOM05D005387 ORTHO05D006711 1.7e-55 219.9 121 88.4
THA.LOC104825999 Tarenaya hassleriana HOM05D005387 ORTHO05D006711 1.7e-55 219.9 151 74.8
arahy.Tifrunner.gnm1.ann1.48M1R9 Arachis hypogaea HOM05D005387 ORTHO05D006711 2.9e-55 219.2 153 74.5
arahy.Tifrunner.gnm1.ann1.4E1RNV Arachis hypogaea HOM05D005387 ORTHO05D006711 2.9e-55 219.2 153 74.5
ECA247G0058 Erigeron canadensis HOM05D005387 ORTHO05D006711 2.9e-55 219.2 149 74.5
Zm00001eb417930 Zea mays HOM05D005387 ORTHO05D006711 2.9e-55 219.2 150 73.3
DCAR_002738 Daucus carota HOM05D005387 ORTHO05D006711 3.7e-55 218.8 152 73.0
HPP92_023768 Vanilla planifolia HOM05D005387 ORTHO05D006711 4.9e-55 218.4 148 75.0
Gorai.004G081200 Gossypium raimondii HOM05D005387 ORTHO05D006711 8.3e-55 217.6 120 88.3
Lalb_Chr01g0009611 Lupinus albus HOM05D005387 ORTHO05D006711 8.3e-55 217.6 152 73.7
Os05g0144800 Oryza sativa ssp. japonica HOM05D005387 ORTHO05D006711 1.1e-54 217.2 150 72.7
AUR62007973 Chenopodium quinoa HOM05D005387 ORTHO05D006711 3.2e-54 215.7 140 80.0
MD11G1286800 Malus domestica HOM05D005387 ORTHO05D006711 4.6e-53 211.8 116 91.4
Mapoly0059s0089 Marchantia polymorpha HOM05D005387 ORTHO05D006711 1.3e-52 210.3 157 69.4
Pp3c10_16570 Physcomitrium patens HOM05D005387 ORTHO05D006711 1.5e-51 206.8 149 70.5
Peaxi162Scf00161g01216 Petunia axillaris HOM05D005387 ORTHO05D006711 1.4e-49 200.3 134 76.1
CBR_g47089 Chara braunii HOM05D005387 ORTHO05D006711 6.8e-49 198.0 126 79.4
AagrBONN_evm.TU.Sc2ySwM_228.154 Anthoceros agrestis HOM05D005387 ORTHO05D006711 5.4e-46 188.3 148 66.2
Atru.chr5.1425 Acer truncatum HOM05D005387 ORTHO05D006711 1.9e-43 179.9 120 77.5
Cre17.g706300 Chlamydomonas reinhardtii HOM05D005387 ORTHO05D006711 1.6e-42 176.8 143 65.0
MCO11G848 Micromonas commoda HOM05D005387 ORTHO05D006711 4.7e-42 175.3 150 59.3
PRCOL_00002595 Prasinoderma coloniale HOM05D005387 ORTHO05D006711 2.4e-41 172.9 148 60.1
SMO118G0087 Selaginella moellendorffii HOM05D005387 ORTHO05D006711 4.0e-41 172.2 166 59.6
BolC8t52806H Brassica oleracea HOM05D005387 ORTHO05D006711 2.5e-35 152.9 119 66.4
Haze_26829 Corylus avellana HOM05D005387 ORTHO05D006711 1.5e-32 143.7 131 54.2
AUR62017677 Chenopodium quinoa HOM05D005387 ORTHO05D006711 1.6e-29 133.7 80 83.8
unitig_0.g111 Utricularia gibba HOM05D005387 ORTHO05D006711 2.3e-28 129.8 100 66.0
Thhalv10011297m.g Eutrema salsugineum HOM05D005387 ORTHO05D006711 3.3e-27 125.9 95 70.5
C08p52900 Brassica napus HOM05D005387 ORTHO05D006711 6.2e-26 121.7 119 57.1
Cpa.g.sc52.27 Carica papaya HOM05D005387 ORTHO05D006711 2.4e-22 109.8 87 67.8
Prupe.8G242000 Prunus persica HOM05D005387 ORTHO05D006711 4.2e-22 109.0 85 68.2
SGA_v2.0_scaffold1G00463 Striga asiatica HOM05D005387 ORTHO05D006711 3.5e-21 105.9 84 67.9
Nitab4.5_0000295g0200 Nicotiana tabacum HOM05D005387 ORTHO05D006711 6.0e-21 105.1 87 65.5
HPP92_026404 Vanilla planifolia HOM05D005387 ORTHO05D006711 7.4e-11 71.6 66 59.1
SGA_v2.0_scaffold304G47926 Striga asiatica HOM05D005387 ORTHO05D006711 3.1e-09 66.2 65 60.0
HPP92_026405 Vanilla planifolia HOM05D005387 ORTHO05D006711 7.6e-08 61.6 36 77.8
CARHR002530 Cardamine hirsuta HOM05D005387 ORTHO05D006711 7.1e-06 55.1 58 53.4
ClCG09G002140 Citrullus lanatus HOM05D001537 ORTHO05D002595 7.1e-06 55.1 85 36.5


User provided reference genes

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