Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 5.2e-221 770.8 399 100.0
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.6e-209 732.6 399 94.7
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 5.0e-139 498.4 462 62.1
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 2.0e-124 449.9 402 62.7
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 2.9e-110 402.9 405 55.3
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 8.3e-102 374.8 399 52.6
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 2.7e-100 369.8 401 52.9
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 4.6e-100 369.0 406 51.5
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 1.1e-96 357.8 398 51.5
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 3.1e-96 356.3 408 50.5
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 5.8e-95 352.1 409 50.1
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 4.9e-94 349.0 389 52.2
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 6.4e-94 348.6 383 51.7
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.4e-93 346.7 398 53.0
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 3.2e-93 346.3 379 50.7
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 3.2e-93 346.3 391 51.4
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 4.1e-93 345.9 385 50.9
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 5.4e-93 345.5 400 49.2
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 7.1e-93 345.1 394 49.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.2e-92 344.4 394 49.0
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.6e-92 344.0 403 49.9
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 2.1e-92 343.6 394 50.5
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.1e-92 343.6 392 50.8
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 2.7e-92 343.2 412 49.5
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 7.8e-92 341.7 413 48.2
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 1.0e-91 341.3 395 50.4
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.0e-91 341.3 385 51.2
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.3e-91 340.9 401 48.9
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.3e-91 340.9 400 52.2
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 6.6e-91 338.6 394 48.7
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 6.6e-91 338.6 394 48.5
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.1e-90 337.8 402 50.0
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 5.6e-90 335.5 316 55.4
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 7.3e-90 335.1 396 49.0
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 2.1e-89 333.6 400 49.2
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 6.2e-89 332.0 380 49.5
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 3.1e-88 329.7 396 47.7
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 4.0e-88 329.3 400 48.0
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 5.2e-88 328.9 400 47.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 5.2e-88 328.9 385 46.8
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 6.8e-88 328.6 358 51.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 6.8e-88 328.6 392 48.7
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 1.5e-87 327.4 395 48.1
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 2.0e-87 327.0 401 47.4
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 2.6e-87 326.6 396 49.5
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.4e-87 326.2 394 47.5
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 4.4e-87 325.9 408 47.5
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 7.6e-87 325.1 397 47.6
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 1.3e-86 324.3 385 47.8
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 1.7e-86 323.9 402 47.0
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 1.7e-86 323.9 340 52.6
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 2.2e-86 323.6 395 48.1
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 2.2e-86 323.6 392 48.2
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.2e-86 323.6 397 47.6
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 2.9e-86 323.2 382 46.3
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 6.4e-86 322.0 396 47.0
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.9e-85 320.5 380 48.4
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 2.4e-85 320.1 362 49.2
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 7.1e-85 318.5 386 47.9
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.6e-84 317.4 381 50.1
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 1.6e-84 317.4 395 46.8
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 2.7e-84 316.6 406 49.8
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 3.5e-84 316.2 374 47.9
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 5.1e-83 312.4 397 45.1
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 5.1e-83 312.4 392 48.0
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 3.3e-82 309.7 397 47.6
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 5.6e-82 308.9 387 46.8
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.6e-81 307.4 389 47.3
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 3.6e-81 306.2 391 45.3
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 6.2e-81 305.4 390 46.4
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 1.1e-80 304.7 398 47.7
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.4e-80 303.5 363 50.4
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 9.0e-80 301.6 380 45.3
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 2.0e-79 300.4 380 45.5
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.6e-79 300.1 380 45.3
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 4.4e-79 299.3 337 50.4
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 1.3e-78 297.7 325 51.4
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.9e-77 293.9 380 45.5
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.9e-77 293.9 380 45.5
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 7.1e-77 292.0 386 45.1
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 2.7e-76 290.0 386 43.5
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 6.6e-75 285.4 388 42.5
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 2.5e-74 283.5 335 49.6
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 1.6e-73 280.8 379 46.2
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 2.6e-71 273.5 428 42.1
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.9e-69 267.3 394 43.1
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 4.8e-65 252.7 297 48.5
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 8.1e-65 251.9 282 46.5
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.0e-62 245.0 340 42.9
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 1.4e-61 241.1 584 32.5
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.1e-52 210.7 323 36.8
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 1.8e-51 207.6 279 42.7
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 6.7e-51 205.7 248 48.8
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 1.4e-48 198.0 389 35.0
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 4.5e-47 193.0 182 56.0
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 4.5e-47 193.0 236 45.3
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.9e-45 187.6 213 49.8
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.2e-44 184.9 122 74.6
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.3e-41 174.9 214 48.1
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 9.1e-40 168.7 144 65.3
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.2e-38 164.1 161 52.2
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 1.4e-37 161.4 386 33.9
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.9e-37 161.0 209 44.5
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 7.4e-34 149.1 165 48.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.5e-29 134.0 98 57.1
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 9.4e-29 132.1 197 37.6
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.7e-22 111.3 83 65.1
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 5.5e-21 106.3 226 34.1
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 1.5e-18 98.2 115 46.1
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 3.5e-07 60.5 77 36.4
unitig_21.g20280 Utricularia gibba HOM05D001245 ORTHO05D004475 7.7e-07 59.3 81 33.3
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 3.8e-06 57.0 182 29.1
HPP92_027721 Vanilla planifolia HOM05D001245 ORTHO05D004475 5.0e-06 56.6 81 29.6
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 6.6e-06 56.2 81 29.6


User provided reference genes

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