Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 0.0e+00 2240.3 1119 100.0
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.5e-265 919.5 1111 50.1
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.6e-251 872.5 1143 47.5
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.5e-212 744.2 544 70.6
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.4e-193 679.5 1013 42.9
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.0e-173 615.1 544 60.5
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.4e-161 573.5 516 61.2
ATR0820G260 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.5e-145 520.0 1034 36.8
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.5e-137 493.4 561 50.4
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.4e-101 375.6 572 41.3
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.4e-100 370.5 611 39.9
ATR0820G180 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.6e-89 334.0 280 66.8
ATR1159G077 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.5e-87 328.2 384 51.6
ATR0820G141 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.1e-69 268.1 267 56.2
ATR0820G009 Amborella trichopoda HOM05D010077 ORTHO05D013698 6.9e-37 160.6 146 57.5
ATR1159G070 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.0e-32 145.2 112 67.9
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 9.4e-26 123.6 526 27.9
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 3.6e-25 121.7 193 36.8
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 7.9e-25 120.6 289 31.5
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 1.8e-24 119.4 264 33.7
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 6.7e-24 117.5 283 29.7
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 2.0e-23 115.9 337 29.1
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 3.3e-23 115.2 532 27.3
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 4.4e-23 114.8 567 25.6
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 4.4e-23 114.8 193 35.8
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 4.4e-23 114.8 286 31.5
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 4.4e-23 114.8 273 34.1
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 5.7e-23 114.4 274 31.0
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 7.4e-23 114.0 239 32.6
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 7.4e-23 114.0 243 34.2
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 9.7e-23 113.6 210 36.2
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.3e-22 113.2 497 27.4
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.3e-22 113.2 572 26.0
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 1.3e-22 113.2 286 30.4
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 1.3e-22 113.2 196 35.2
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 1.3e-22 113.2 531 25.4
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 2.2e-22 112.5 253 31.2
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 2.8e-22 112.1 173 35.3
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 2.8e-22 112.1 170 37.6
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 3.7e-22 111.7 234 32.9
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 3.7e-22 111.7 233 32.6
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 4.8e-22 111.3 244 33.6
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 4.8e-22 111.3 227 31.7
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 6.3e-22 110.9 249 30.9
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.3e-22 110.9 357 30.3
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 8.2e-22 110.5 216 33.8
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 8.2e-22 110.5 325 27.7
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 8.2e-22 110.5 254 30.7
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 1.1e-21 110.2 282 31.9
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 1.1e-21 110.2 283 31.4
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 1.1e-21 110.2 291 30.9
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.4e-21 109.8 278 30.2
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 1.4e-21 109.8 233 30.9
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 1.4e-21 109.8 226 32.7
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 1.4e-21 109.8 261 29.5
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 1.8e-21 109.4 270 32.6
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 1.8e-21 109.4 247 33.2
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 1.8e-21 109.4 275 31.6
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 2.4e-21 109.0 273 29.7
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 3.1e-21 108.6 257 31.5
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 3.1e-21 108.6 251 33.1
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 3.1e-21 108.6 535 24.5
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 3.1e-21 108.6 226 30.5
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 3.1e-21 108.6 327 27.2
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 3.1e-21 108.6 285 31.9
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 4.1e-21 108.2 540 26.1
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 5.3e-21 107.8 284 28.5
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 5.3e-21 107.8 194 33.5
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 5.3e-21 107.8 237 30.8
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 7.0e-21 107.5 190 33.7
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 9.1e-21 107.1 281 29.2
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 9.1e-21 107.1 282 30.1
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 9.1e-21 107.1 283 29.0
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 9.1e-21 107.1 231 32.5
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 9.1e-21 107.1 244 31.1
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 9.1e-21 107.1 235 32.8
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 9.1e-21 107.1 235 32.8
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 1.2e-20 106.7 270 31.1
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 1.2e-20 106.7 245 33.1
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 1.6e-20 106.3 221 31.7
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 1.6e-20 106.3 168 35.1
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 2.0e-20 105.9 280 30.0
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 2.0e-20 105.9 274 29.9
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 2.0e-20 105.9 283 33.6
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 2.0e-20 105.9 282 31.6
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 2.6e-20 105.5 199 32.7
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 3.5e-20 105.1 280 29.6
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 3.5e-20 105.1 515 24.5
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 4.5e-20 104.8 273 30.8
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 4.5e-20 104.8 300 30.0
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 4.5e-20 104.8 279 31.5
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 5.9e-20 104.4 270 28.1
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 5.9e-20 104.4 237 31.6
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 5.9e-20 104.4 249 30.9
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 5.9e-20 104.4 249 30.9
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 5.9e-20 104.4 193 33.2
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 7.7e-20 104.0 236 30.9
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 7.7e-20 104.0 141 35.5
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 7.7e-20 104.0 192 31.2
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 7.7e-20 104.0 535 25.6
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 1.0e-19 103.6 243 32.1
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 1.3e-19 103.2 253 30.0
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 1.7e-19 102.8 192 30.7
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.2e-19 102.4 172 33.1
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 2.2e-19 102.4 257 28.8
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 2.2e-19 102.4 213 33.8
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 5.0e-19 101.3 272 30.1
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 5.0e-19 101.3 317 29.3
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 6.5e-19 100.9 289 29.1
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 6.5e-19 100.9 243 31.7
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 8.5e-19 100.5 197 31.5
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 8.5e-19 100.5 278 29.5
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.1e-18 100.1 278 30.2
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 1.1e-18 100.1 192 32.8
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.9e-18 99.4 239 28.5
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 2.5e-18 99.0 165 37.0
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 2.5e-18 99.0 515 23.7
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 2.5e-18 99.0 293 27.6
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 3.2e-18 98.6 275 30.5
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 3.2e-18 98.6 270 29.3
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 3.2e-18 98.6 313 26.5
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.2e-18 98.6 148 36.5
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 4.2e-18 98.2 132 37.9
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 4.2e-18 98.2 296 29.1
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 4.2e-18 98.2 260 28.8
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 5.5e-18 97.8 170 33.5
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 5.5e-18 97.8 342 25.7
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 7.2e-18 97.4 282 26.6
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 7.2e-18 97.4 277 29.6
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 9.4e-18 97.1 223 31.4
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.2e-17 96.7 205 29.3
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 1.2e-17 96.7 223 31.4
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.2e-17 96.7 193 30.6
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 1.2e-17 96.7 204 33.3
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.2e-17 96.7 280 30.0
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.6e-17 96.3 297 27.6
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 1.6e-17 96.3 273 27.5
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.1e-17 95.9 181 31.5
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.1e-17 95.9 181 30.9
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 2.1e-17 95.9 282 25.2
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 2.1e-17 95.9 274 29.2
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 2.7e-17 95.5 217 30.0
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 2.7e-17 95.5 223 30.9
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 2.7e-17 95.5 181 31.5
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 2.7e-17 95.5 262 28.2
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 2.7e-17 95.5 255 28.6
ATR0820G051 Amborella trichopoda HOM05D010077 ORTHO05D066700 3.6e-17 95.1 60 80.0
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 4.7e-17 94.7 251 28.7
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 6.1e-17 94.4 256 29.3
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 8.0e-17 94.0 214 31.8
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.0e-16 93.6 297 27.6
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 1.4e-16 93.2 186 31.2
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 2.3e-16 92.4 246 29.7
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 2.3e-16 92.4 246 29.7
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.3e-16 92.4 216 31.9
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 3.0e-16 92.0 265 27.9
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 4.0e-16 91.7 268 25.0
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 5.2e-16 91.3 127 36.2
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 6.7e-16 90.9 194 28.9
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 8.8e-16 90.5 177 30.5
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 2.6e-15 89.0 246 28.9
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 2.6e-15 89.0 249 28.9
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 2.6e-15 89.0 249 28.9
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 2.6e-15 89.0 135 37.8
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 3.3e-15 88.6 239 31.0
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 4.4e-15 88.2 210 28.6
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 7.5e-15 87.4 241 30.7
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 7.5e-15 87.4 125 36.0
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 7.5e-15 87.4 252 30.6
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 9.7e-15 87.0 118 38.1
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 2.2e-14 85.9 364 23.4
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 3.7e-14 85.1 257 28.4
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 4.8e-14 84.7 125 40.0
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.1e-13 83.6 172 33.7
ATR0512G001 Amborella trichopoda HOM05D010077 ORTHO05D067894 1.2e-12 80.1 236 29.7
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 4.5e-12 78.2 115 34.8
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 3.2e-10 72.0 104 40.4
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 7.2e-10 70.9 105 38.1
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 8.0e-09 67.4 155 31.0
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 1.4e-08 66.6 255 24.7
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 3.0e-08 65.5 251 23.9
ATR0820G155 Amborella trichopoda HOM05D010077 ORTHO05D069271 6.8e-08 64.3 66 65.2
ATR1122G001 Amborella trichopoda HOM05D010077 ORTHO05D067316 2.6e-07 62.4 176 31.2
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.8e-06 58.9 83 39.8


User provided reference genes

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