Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 0.0e+00 1971.4 972 100.0
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 0.0e+00 1720.7 966 88.7
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.8e-222 776.9 510 76.3
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.5e-186 656.4 771 50.5
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.3e-185 654.4 717 52.0
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.0e-185 652.5 505 68.3
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.9e-169 599.7 588 56.0
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.0e-166 589.7 677 51.4
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.9e-156 557.0 584 54.8
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 9.3e-139 498.8 461 57.3
ATR0820G260 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.9e-87 327.0 309 58.9
ATR1159G077 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.9e-71 273.9 344 49.4
ATR0512G001 Amborella trichopoda HOM05D010077 ORTHO05D067894 6.0e-61 240.4 262 53.8
ATR1122G001 Amborella trichopoda HOM05D010077 ORTHO05D067316 1.2e-45 189.5 208 52.9
ATR0820G009 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.1e-36 157.5 128 61.7
ATR0820G141 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.3e-35 154.5 167 48.5
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 5.3e-25 120.9 256 32.4
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.3e-23 116.3 300 30.7
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.7e-23 115.9 300 30.7
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 2.2e-23 115.5 196 35.7
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 6.5e-23 114.0 286 30.1
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.1e-22 113.2 205 36.1
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.9e-22 112.5 205 36.1
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 1.9e-22 112.5 204 35.3
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 3.2e-22 111.7 539 24.9
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 4.2e-22 111.3 222 34.7
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 1.2e-21 109.8 224 31.7
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 1.2e-21 109.8 211 34.6
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 1.6e-21 109.4 539 24.5
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 1.6e-21 109.4 223 31.8
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 2.7e-21 108.6 253 29.6
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 2.7e-21 108.6 247 31.2
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 3.5e-21 108.2 212 33.5
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 3.5e-21 108.2 224 32.1
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 3.5e-21 108.2 280 28.9
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 3.5e-21 108.2 532 24.8
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 4.6e-21 107.8 221 31.2
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 4.6e-21 107.8 229 31.0
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.0e-21 107.5 558 23.3
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 6.0e-21 107.5 205 33.7
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 6.0e-21 107.5 271 28.0
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 7.9e-21 107.1 278 28.1
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 7.9e-21 107.1 226 32.3
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 7.9e-21 107.1 192 34.9
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 7.9e-21 107.1 275 30.2
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 7.9e-21 107.1 202 34.7
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 1.0e-20 106.7 221 31.7
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 1.0e-20 106.7 205 34.1
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 1.0e-20 106.7 273 30.4
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.3e-20 106.3 185 35.1
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 1.8e-20 105.9 227 33.9
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 1.8e-20 105.9 205 34.1
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 1.8e-20 105.9 207 33.3
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 1.8e-20 105.9 491 24.0
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 2.3e-20 105.5 237 33.3
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 2.3e-20 105.5 206 32.0
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 2.3e-20 105.5 192 31.8
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 2.3e-20 105.5 233 30.9
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 2.3e-20 105.5 268 31.7
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 3.0e-20 105.1 558 23.5
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 3.9e-20 104.8 706 22.7
ATR0820G180 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.1e-20 104.4 313 29.4
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 5.1e-20 104.4 198 33.3
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 5.1e-20 104.4 276 30.4
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 5.1e-20 104.4 512 24.6
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 5.1e-20 104.4 506 23.9
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 5.1e-20 104.4 183 34.4
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 6.7e-20 104.0 489 23.9
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.7e-20 104.0 205 33.7
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 6.7e-20 104.0 215 29.3
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 6.7e-20 104.0 226 29.6
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 6.7e-20 104.0 207 32.9
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 6.7e-20 104.0 223 31.8
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 6.7e-20 104.0 223 31.8
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 8.7e-20 103.6 245 29.8
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 8.7e-20 103.6 279 29.0
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 8.7e-20 103.6 603 23.4
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 8.7e-20 103.6 505 24.6
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 1.1e-19 103.2 561 24.8
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 1.1e-19 103.2 197 32.0
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.5e-19 102.8 206 32.0
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.5e-19 102.8 223 31.8
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 1.5e-19 102.8 498 24.1
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.9e-19 102.4 234 30.3
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.9e-19 102.4 245 31.8
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 1.9e-19 102.4 505 24.2
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.5e-19 102.1 222 31.1
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 3.3e-19 101.7 266 32.7
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 3.3e-19 101.7 223 33.2
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 3.3e-19 101.7 204 32.4
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 3.3e-19 101.7 206 33.5
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 4.3e-19 101.3 209 31.1
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 4.3e-19 101.3 230 30.0
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 4.3e-19 101.3 311 27.7
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 5.7e-19 100.9 248 29.0
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 5.7e-19 100.9 192 34.4
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 7.4e-19 100.5 245 28.2
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 9.6e-19 100.1 599 23.2
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 9.6e-19 100.1 174 36.2
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 9.6e-19 100.1 196 32.7
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.3e-18 99.8 246 31.3
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 1.3e-18 99.8 173 34.1
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 1.6e-18 99.4 618 23.6
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 2.1e-18 99.0 131 35.1
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 2.8e-18 98.6 603 23.2
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 2.8e-18 98.6 264 30.3
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 2.8e-18 98.6 502 24.3
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 2.8e-18 98.6 269 29.4
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 2.8e-18 98.6 269 29.4
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 3.7e-18 98.2 283 28.6
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 3.7e-18 98.2 225 32.4
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.7e-18 98.2 140 39.3
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 4.8e-18 97.8 223 30.9
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 4.8e-18 97.8 526 22.4
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 4.8e-18 97.8 191 34.0
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 6.3e-18 97.4 509 23.2
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 6.3e-18 97.4 505 23.4
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 6.3e-18 97.4 516 23.8
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 8.2e-18 97.1 551 23.6
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 8.2e-18 97.1 565 22.7
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 8.2e-18 97.1 527 22.6
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 1.1e-17 96.7 166 35.5
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.1e-17 96.7 280 28.2
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 1.8e-17 95.9 257 30.4
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 1.8e-17 95.9 205 29.3
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 2.4e-17 95.5 288 27.4
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 2.4e-17 95.5 288 27.4
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.4e-17 95.5 223 30.5
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 3.1e-17 95.1 169 32.0
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 3.1e-17 95.1 496 24.0
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 3.1e-17 95.1 587 22.8
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 3.1e-17 95.1 522 23.0
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 5.3e-17 94.4 222 32.0
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 5.3e-17 94.4 239 29.3
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 5.3e-17 94.4 258 29.5
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 5.3e-17 94.4 204 29.9
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 5.3e-17 94.4 225 28.4
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 9.0e-17 93.6 657 22.2
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 9.0e-17 93.6 140 38.6
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 9.0e-17 93.6 249 27.3
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 1.2e-16 93.2 537 23.1
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.2e-16 93.2 196 29.6
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 1.2e-16 93.2 190 30.5
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.5e-16 92.8 222 27.9
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 1.5e-16 92.8 196 29.6
ATR0820G155 Amborella trichopoda HOM05D010077 ORTHO05D069271 2.0e-16 92.4 87 58.6
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 2.6e-16 92.0 229 30.1
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 2.6e-16 92.0 227 30.0
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 3.4e-16 91.7 557 23.2
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 3.4e-16 91.7 537 22.2
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 4.5e-16 91.3 544 23.5
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 5.9e-16 90.9 222 27.9
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 7.6e-16 90.5 537 23.5
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 7.6e-16 90.5 242 28.1
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 7.6e-16 90.5 605 22.0
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 1.0e-15 90.1 196 29.6
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 1.7e-15 89.4 225 30.2
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.7e-15 89.4 277 26.7
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.2e-15 89.0 117 39.3
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 2.2e-15 89.0 211 30.8
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 2.9e-15 88.6 175 31.4
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 3.8e-15 88.2 186 31.2
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 8.5e-15 87.0 246 27.6
ATR1159G070 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.4e-14 86.3 61 75.4
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 1.9e-14 85.9 263 27.4
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 1.9e-14 85.9 253 26.9
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 3.2e-14 85.1 260 26.9
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 3.2e-14 85.1 260 26.9
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 3.2e-14 85.1 264 28.0
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.2e-14 85.1 132 38.6
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 9.3e-14 83.6 217 27.6
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 9.3e-14 83.6 203 28.1
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 1.2e-13 83.2 135 31.1
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 1.6e-13 82.8 260 26.9
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 1.6e-13 82.8 260 26.9
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 3.0e-12 78.6 145 35.9
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 8.7e-12 77.0 181 30.9
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 1.1e-11 76.6 122 35.2
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 4.3e-11 74.7 145 31.7
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 4.1e-09 68.2 214 26.2
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 4.5e-08 64.7 95 37.9
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 1.7e-07 62.8 96 37.5


User provided reference genes

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