Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G075 Amborella trichopoda HOM05D010077 ORTHO05D013698 0.0e+00 1538.9 801 100.0
ATR0820G047 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.4e-203 712.6 585 68.9
ATR0820G099 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.9e-186 656.4 505 68.7
ATR0820G235 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.9e-183 646.0 505 68.3
ATR0820G089 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.0e-118 431.0 519 46.2
ATR0439G001 Amborella trichopoda HOM05D010077 ORTHO05D013698 9.1e-116 422.2 524 46.2
ATR0820G152 Amborella trichopoda HOM05D010077 ORTHO05D013698 5.5e-113 412.9 519 46.8
ATR0820G285 Amborella trichopoda HOM05D010077 ORTHO05D013698 3.0e-111 407.1 516 45.3
ATR0820G252 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.9e-101 374.0 611 39.9
ATR0820G299 Amborella trichopoda HOM05D010077 ORTHO05D013698 7.3e-89 332.8 470 43.6
ATR0820G260 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.6e-56 225.3 478 34.5
ATR0512G001 Amborella trichopoda HOM05D010077 ORTHO05D067894 7.2e-36 156.8 264 42.4
ATR0820G141 Amborella trichopoda HOM05D010077 ORTHO05D013698 9.1e-31 139.8 184 44.6
Atru.chr12.1878 Acer truncatum HOM05D000572 ORTHO05D002399 1.0e-26 126.3 317 31.5
ATR1159G077 Amborella trichopoda HOM05D010077 ORTHO05D013698 2.3e-26 125.2 344 32.6
ATR1122G001 Amborella trichopoda HOM05D010077 ORTHO05D067316 7.4e-25 120.2 211 42.7
SGA_v2.0_scaffold122G33283 Striga asiatica HOM05D000572 ORTHO05D002399 7.4e-25 120.2 199 36.7
CsaV3_5G013990 Cucumis sativus L. HOM05D000572 ORTHO05D002399 1.7e-24 119.0 189 36.5
MELO3C026448.2 Cucumis melo HOM05D000572 ORTHO05D002399 2.8e-24 118.2 189 36.5
CSS0016257 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.4e-23 115.9 259 31.3
Duzib147G0313 Durio zibethinus HOM05D000572 ORTHO05D002399 1.4e-23 115.9 215 35.3
CSS0042457 Camellia sinensis var. sinensis HOM05D000572 ORTHO05D002399 1.8e-23 115.5 259 31.3
Haze_19377 Corylus avellana HOM05D000572 ORTHO05D002399 2.4e-23 115.2 244 32.0
Nitab4.5_0004345g0030 Nicotiana tabacum HOM05D000572 ORTHO05D002399 2.4e-23 115.2 203 37.4
Sed0009647 Sechium edule HOM05D000572 ORTHO05D002399 3.1e-23 114.8 200 34.5
Atru.chr1.1803 Acer truncatum HOM05D000572 ORTHO05D002399 5.3e-23 114.0 294 31.6
CDE12G0633 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 5.3e-23 114.0 223 33.6
Sc02g0000170 Simmondsia chinensis HOM05D000572 ORTHO05D002399 5.3e-23 114.0 213 34.7
TWI15G0599 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 5.3e-23 114.0 249 32.9
Gohir.A05G373000 Gossypium hirsutum HOM05D000572 ORTHO05D002399 9.1e-23 113.2 277 31.8
Gohir.D04G042500 Gossypium hirsutum HOM05D000572 ORTHO05D002399 9.1e-23 113.2 283 31.4
Cpa.g.sc37.192 Carica papaya HOM05D000572 ORTHO05D002399 1.2e-22 112.8 261 34.1
Glyma.06G178200 Glycine max HOM05D000572 ORTHO05D002399 1.5e-22 112.5 213 31.5
Ciclev10027585m.g Citrus clementina HOM05D000572 ORTHO05D002399 2.0e-22 112.1 198 34.8
Lj5A282T76 Lonicera japonica HOM05D000572 ORTHO05D002399 2.0e-22 112.1 190 35.3
Rhsim11G0118300 Rhododendron simsii HOM05D000572 ORTHO05D002399 2.0e-22 112.1 267 30.7
Gorai.012G048000 Gossypium raimondii HOM05D000572 ORTHO05D002399 2.6e-22 111.7 277 31.4
Lj3g0025806 Lotus japonicus HOM05D000572 ORTHO05D002399 2.6e-22 111.7 251 31.9
Manes.13G119400 Manihot esculenta HOM05D000572 ORTHO05D002399 2.6e-22 111.7 210 30.5
Medtr2g046020 Medicago truncatula HOM05D000572 ORTHO05D002399 4.5e-22 110.9 213 31.5
Medtr6g065580 Medicago truncatula HOM05D000572 ORTHO05D002399 5.9e-22 110.5 210 31.0
Manes.13G155232 Manihot esculenta HOM05D000572 ORTHO05D002399 7.7e-22 110.2 182 33.5
Thecc.01G144800 Theobroma cacao HOM05D000572 ORTHO05D002399 1.0e-21 109.8 266 30.1
DCAR_003283 Daucus carota HOM05D000572 ORTHO05D002399 1.3e-21 109.4 200 35.5
DCAR_009626 Daucus carota HOM05D000572 ORTHO05D002399 1.3e-21 109.4 185 35.1
Lsat_1_v5_gn_7_75121 Lactuca sativa HOM05D000572 ORTHO05D002399 1.3e-21 109.4 200 35.5
Lj2g0020412 Lotus japonicus HOM05D000572 ORTHO05D002399 1.7e-21 109.0 213 31.5
Lalb_Chr01g0008651 Lupinus albus HOM05D000572 ORTHO05D002399 1.7e-21 109.0 269 32.0
MBI03_g20877_MAGBIO Magnolia biondii HOM05D000572 ORTHO05D002399 1.7e-21 109.0 263 32.3
TWI63G0302 Tripterygium wilfordii HOM05D000572 ORTHO05D002399 1.7e-21 109.0 183 36.6
VMungo0464G1539 Vigna mungo HOM05D000572 ORTHO05D002399 1.7e-21 109.0 298 28.5
Ah.01g020670 Amaranthus hybridus HOM05D000572 ORTHO05D002399 2.2e-21 108.6 281 31.3
Dinv29674 Davidia involucrata HOM05D000572 ORTHO05D002399 2.2e-21 108.6 295 31.2
unitig_26.g9010 Utricularia gibba HOM05D000572 ORTHO05D002399 2.2e-21 108.6 239 30.1
arahy.Tifrunner.gnm1.ann1.5512QZ Arachis hypogaea HOM05D000572 ORTHO05D002399 2.9e-21 108.2 202 32.7
arahy.Tifrunner.gnm1.ann1.I0VWWF Arachis hypogaea HOM05D000572 ORTHO05D002399 2.9e-21 108.2 202 32.7
AUR62001561 Chenopodium quinoa HOM05D000572 ORTHO05D002399 2.9e-21 108.2 202 33.7
Lalb_Chr03g0033391 Lupinus albus HOM05D000572 ORTHO05D002399 2.9e-21 108.2 214 30.8
PGSC0003DMG400030941 Solanum tuberosum HOM05D000572 ORTHO05D002399 2.9e-21 108.2 192 34.4
Eucgr.I00036 Eucalyptus grandis HOM05D000572 ORTHO05D002399 3.8e-21 107.8 213 31.5
MD15G1231100 Malus domestica HOM05D000572 ORTHO05D002399 3.8e-21 107.8 242 31.0
Glyma.04G187600 Glycine max HOM05D000572 ORTHO05D002399 5.0e-21 107.5 213 30.5
SGA_v2.0_scaffold8G04469 Striga asiatica HOM05D000572 ORTHO05D002399 6.5e-21 107.1 286 30.8
Cc07_g19880 Coffea canephora HOM05D000572 ORTHO05D002399 8.5e-21 106.7 219 32.0
VMungo0464G1362 Vigna mungo HOM05D000572 ORTHO05D002399 8.5e-21 106.7 251 30.7
AUR62043444 Chenopodium quinoa HOM05D000572 ORTHO05D002399 1.1e-20 106.3 271 31.7
ClCG11G000400 Citrullus lanatus HOM05D000572 ORTHO05D002399 1.1e-20 106.3 206 33.5
MD02G1115100 Malus domestica HOM05D000572 ORTHO05D002399 1.1e-20 106.3 239 31.8
Nn5g27348 Nelumbo nucifera HOM05D000572 ORTHO05D002399 1.1e-20 106.3 185 34.1
Nn5g27349 Nelumbo nucifera HOM05D000572 ORTHO05D002399 1.1e-20 106.3 185 34.1
Nitab4.5_0004640g0010 Nicotiana tabacum HOM05D000572 ORTHO05D002399 1.1e-20 106.3 264 32.2
Prupe.7G183100 Prunus persica HOM05D000572 ORTHO05D002399 1.1e-20 106.3 299 30.1
CANSAT01G1917 Cannabis sativa HOM05D000572 ORTHO05D002399 1.4e-20 105.9 224 30.8
ATR0584G123 Amborella trichopoda HOM05D000572 ORTHO05D002399 1.9e-20 105.5 314 32.2
AL8G22690 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 1.9e-20 105.5 228 29.8
ECA236G0624 Erigeron canadensis HOM05D000572 ORTHO05D002399 1.9e-20 105.5 183 36.1
HanXRQChr04g0120041 Helianthus annuus HOM05D000572 ORTHO05D002399 1.9e-20 105.5 181 35.4
THA.LOC104823726 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 1.9e-20 105.5 200 33.0
MSTRG.27892 Avicennia marina HOM05D000572 ORTHO05D002399 2.5e-20 105.1 201 34.3
Lj2A766T19 Lonicera japonica HOM05D000572 ORTHO05D002399 2.5e-20 105.1 202 35.1
Oeu032220.1 Olea europaea HOM05D000572 ORTHO05D002399 2.5e-20 105.1 265 31.7
TPR.G12077 Trifolium pratense HOM05D000572 ORTHO05D002399 2.5e-20 105.1 208 30.3
Zm00001eb301620 Zea mays HOM05D000572 ORTHO05D002399 2.5e-20 105.1 208 36.5
Zm00001eb301630 Zea mays HOM05D000572 ORTHO05D002399 2.5e-20 105.1 208 36.5
CiPaw.12G053900 Carya illinoinensis HOM05D000572 ORTHO05D002399 4.2e-20 104.4 259 29.0
Ca_03350_v3 Cicer arietinum L. HOM05D000572 ORTHO05D002399 4.2e-20 104.4 233 32.6
PSO210G2968 Papaver somniferum HOM05D000572 ORTHO05D002399 4.2e-20 104.4 187 34.2
THA.LOC104820805 Tarenaya hassleriana HOM05D000572 ORTHO05D002399 4.2e-20 104.4 200 33.0
Dinv19128 Davidia involucrata HOM05D000572 ORTHO05D002399 7.2e-20 103.6 185 34.6
PGR119G1310 Punica granatum HOM05D000572 ORTHO05D002399 7.2e-20 103.6 219 30.1
QL10p035076 Quercus lobata HOM05D000572 ORTHO05D002399 7.2e-20 103.6 336 27.1
EL10Ac8g18295 Beta vulgaris HOM05D000572 ORTHO05D002399 9.4e-20 103.2 252 28.2
Peaxi162Scf01053g00039 Petunia axillaris HOM05D000572 ORTHO05D002399 9.4e-20 103.2 269 29.7
Potri.T046100 Populus trichocarpa HOM05D000572 ORTHO05D002399 9.4e-20 103.2 186 30.6
AT5G49160 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.2e-19 102.8 218 30.7
GSVIVG01000263001 Vitis vinifera HOM05D000572 ORTHO05D002399 1.2e-19 102.8 157 39.5
Carub.0004s0387 Capsella rubella HOM05D000572 ORTHO05D002399 1.6e-19 102.4 237 30.8
SEGI_36703 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 1.6e-19 102.4 204 32.8
AL7G42980 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 2.7e-19 101.7 228 29.8
CARHR070500 Cardamine hirsuta HOM05D000572 ORTHO05D002399 2.7e-19 101.7 230 31.3
AUR62021310 Chenopodium quinoa HOM05D000572 ORTHO05D002399 2.7e-19 101.7 282 30.1
DCAR_019941 Daucus carota HOM05D000572 ORTHO05D002399 2.7e-19 101.7 198 31.8
HanXRQChr11g0347301 Helianthus annuus HOM05D000572 ORTHO05D002399 2.7e-19 101.7 239 31.0
Sp4g01970 Schrenkiella parvula HOM05D000572 ORTHO05D002399 2.7e-19 101.7 175 29.7
Hund15395 Selenicereus undatus HOM05D000572 ORTHO05D002399 4.7e-19 100.9 166 33.7
Potri.004G134000 Populus trichocarpa HOM05D000572 ORTHO05D002399 6.1e-19 100.5 187 31.0
Sabra19G0000100 Salix brachista HOM05D000572 ORTHO05D002399 6.1e-19 100.5 191 29.3
SEGI_11646 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 6.1e-19 100.5 198 33.3
FAN19G1502 Fragaria x ananassa HOM05D000572 ORTHO05D002399 8.0e-19 100.1 203 32.5
HPP92_005786 Vanilla planifolia HOM05D000572 ORTHO05D002399 8.0e-19 100.1 267 29.2
CARHR182510 Cardamine hirsuta HOM05D000572 ORTHO05D002399 1.0e-18 99.8 308 29.5
FvH4_1g10300 Fragaria vesca HOM05D000572 ORTHO05D002399 1.0e-18 99.8 203 32.5
Phvul.004G133200 Phaseolus vulgaris HOM05D000572 ORTHO05D002399 1.0e-18 99.8 236 30.5
Ah.04g152120 Amaranthus hybridus HOM05D000572 ORTHO05D002399 1.4e-18 99.4 245 28.6
Sp2g19890 Schrenkiella parvula HOM05D000572 ORTHO05D002399 1.4e-18 99.4 291 30.9
Solyc11g030600.3 Solanum lycopersicum HOM05D000572 ORTHO05D002399 1.4e-18 99.4 286 29.7
AT4G14140 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.8e-18 99.0 161 35.4
Os07g0182900 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 1.8e-18 99.0 266 30.1
PSO447G0024 Papaver somniferum HOM05D000572 ORTHO05D002399 1.8e-18 99.0 187 33.2
Sabra04G0084200 Salix brachista HOM05D000572 ORTHO05D002399 1.8e-18 99.0 187 31.0
Sopen11g013460 Solanum pennellii HOM05D000572 ORTHO05D002399 1.8e-18 99.0 286 29.7
FAN26G0750 Fragaria x ananassa HOM05D000572 ORTHO05D002399 3.0e-18 98.2 203 32.0
RcHm_v2.0_Chr5g0051581 Rosa chinensis HOM05D000572 ORTHO05D002399 3.0e-18 98.2 305 30.8
SEGI_20274 Sequoiadendron giganteum HOM05D000572 ORTHO05D002399 3.0e-18 98.2 204 32.8
CAN.G1330.38 Capsicum annuum HOM05D000572 ORTHO05D002399 3.9e-18 97.8 272 30.1
vmacro01683 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 3.9e-18 97.8 249 29.7
TPR.G37134 Trifolium pratense HOM05D000572 ORTHO05D002399 5.2e-18 97.4 240 30.8
AagrBONN_evm.TU.Sc2ySwM_368.2421 Anthoceros agrestis HOM05D000572 ORTHO05D002399 6.7e-18 97.1 202 33.2
Cc02_g23510 Coffea canephora HOM05D000572 ORTHO05D002399 6.7e-18 97.1 217 31.8
Potri.018G138000 Populus trichocarpa HOM05D000572 ORTHO05D002399 6.7e-18 97.1 557 22.8
Oeu046383.1 Olea europaea HOM05D000572 ORTHO05D002399 1.1e-17 96.3 134 39.6
RcHm_v2.0_Chr2g0097141 Rosa chinensis HOM05D000572 ORTHO05D002399 1.1e-17 96.3 201 31.3
TPR.G31040 Trifolium pratense HOM05D000572 ORTHO05D002399 1.1e-17 96.3 244 27.9
TAR628G1524 Trochodendron aralioides HOM05D000572 ORTHO05D002399 2.0e-17 95.5 286 28.7
BcaB06g27851 Brassica carinata HOM05D000572 ORTHO05D002399 2.6e-17 95.1 238 28.2
Os03g0798300 Oryza sativa ssp. japonica HOM05D000572 ORTHO05D002399 3.3e-17 94.7 239 30.1
CAN.G868.5 Capsicum annuum HOM05D000572 ORTHO05D002399 4.4e-17 94.4 168 34.5
SHI05188 Sapria himalayana HOM05D000572 ORTHO05D002399 5.7e-17 94.0 230 30.9
QL02p103162 Quercus lobata HOM05D000572 ORTHO05D002399 7.4e-17 93.6 137 38.7
Thhalv10003514m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 9.7e-17 93.2 201 29.4
AT4G08990 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 1.3e-16 92.8 236 30.1
Carub.0008s0898 Capsella rubella HOM05D000572 ORTHO05D002399 1.3e-16 92.8 290 25.5
Migut.N00875 Erythranthe guttata HOM05D000572 ORTHO05D002399 2.2e-16 92.0 161 32.9
Aqoxy1G02545 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 2.8e-16 91.7 243 30.0
CDE01G0045 Ceratophyllum demersum HOM05D000572 ORTHO05D002399 2.8e-16 91.7 135 36.3
Lj5g0006387 Lotus japonicus HOM05D000572 ORTHO05D002399 2.8e-16 91.7 314 27.1
Medtr3g026210 Medicago truncatula HOM05D000572 ORTHO05D002399 2.8e-16 91.7 144 33.3
Aqoxy7G03579 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 3.7e-16 91.3 242 29.3
AL7G42360 Arabidopsis lyrata HOM05D000572 ORTHO05D002399 3.7e-16 91.3 263 26.2
Carub.0007s2893 Capsella rubella HOM05D000572 ORTHO05D002399 3.7e-16 91.3 257 30.7
BraA04t17374Z Brassica rapa HOM05D000572 ORTHO05D002399 6.3e-16 90.5 191 29.3
AUR62028017 Chenopodium quinoa HOM05D000572 ORTHO05D002399 6.3e-16 90.5 201 32.3
FAN11G2057 Fragaria x ananassa HOM05D000572 ORTHO05D002399 6.3e-16 90.5 175 34.3
Aqoxy7G03575 Aquilegia oxysepala HOM05D000572 ORTHO05D002399 8.2e-16 90.1 240 30.4
CARHR287820 Cardamine hirsuta HOM05D000572 ORTHO05D002399 8.2e-16 90.1 252 30.2
BolC4t26803H Brassica oleracea HOM05D000572 ORTHO05D002399 1.4e-15 89.4 526 22.8
Thhalv10005683m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.4e-15 89.4 248 31.0
ATR0820G180 Amborella trichopoda HOM05D010077 ORTHO05D013698 1.8e-15 89.0 232 32.3
SMO358G0070 Selaginella moellendorffii HOM05D000572 ORTHO05D002399 3.1e-15 88.2 267 27.7
GSVIVG01000262001 Vitis vinifera HOM05D000572 ORTHO05D002399 3.1e-15 88.2 132 38.6
BcaC02g08585 Brassica carinata HOM05D000572 ORTHO05D002399 4.1e-15 87.8 523 23.1
Ciclev10003543m.g Citrus clementina HOM05D000572 ORTHO05D002399 7.0e-15 87.0 115 38.3
C04p52290 Brassica napus HOM05D000572 ORTHO05D002399 9.1e-15 86.7 526 22.4
CARHR185430 Cardamine hirsuta HOM05D000572 ORTHO05D002399 4.5e-14 84.3 171 30.4
vmacro19834 Vaccinium macrocarpon HOM05D000572 ORTHO05D002399 4.5e-14 84.3 149 33.6
Aa31LG11G8250 Aethionema arabicum HOM05D000572 ORTHO05D002399 1.0e-13 83.2 217 27.6
Ciclev10003166m.g Citrus clementina HOM05D000572 ORTHO05D002399 1.0e-13 83.2 201 28.4
AT4G13610 Arabidopsis thaliana HOM05D000572 ORTHO05D002399 3.8e-13 81.3 165 32.1
BcaC07g41015 Brassica carinata HOM05D000572 ORTHO05D002399 6.5e-13 80.5 189 27.0
BolC8t51587H Brassica oleracea HOM05D000572 ORTHO05D002399 6.5e-13 80.5 197 26.4
ATR0820G009 Amborella trichopoda HOM05D010077 ORTHO05D013698 8.5e-13 80.1 100 48.0
C08p40170 Brassica napus HOM05D000572 ORTHO05D002399 1.1e-12 79.7 189 27.0
A09p57170 Brassica napus HOM05D000572 ORTHO05D002399 2.5e-12 78.6 190 26.3
BraA09t41110Z Brassica rapa HOM05D000572 ORTHO05D002399 2.5e-12 78.6 190 26.3
Psat3g159120 Pisum sativum HOM05D000572 ORTHO05D002399 6.1e-11 73.9 197 27.4
Pp3c11_20540 Physcomitrium patens HOM05D000572 ORTHO05D002399 8.0e-11 73.6 291 25.8
Thhalv10000011m.g Eutrema salsugineum HOM05D000572 ORTHO05D002399 1.0e-10 73.2 227 25.6
ATR1159G070 Amborella trichopoda HOM05D010077 ORTHO05D013698 4.0e-10 71.2 110 41.8
FAN21G2448 Fragaria x ananassa HOM05D000572 ORTHO05D002399 5.2e-10 70.9 96 43.8
Psat3g159080 Pisum sativum HOM05D000572 ORTHO05D002399 1.5e-09 69.3 120 34.2
TAR633G0967 Trochodendron aralioides HOM05D000572 ORTHO05D002399 5.7e-09 67.4 95 40.0
Mapoly0038s0027 Marchantia polymorpha HOM05D000572 ORTHO05D002399 4.1e-07 61.2 183 23.0


User provided reference genes

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