Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 1.6e-208 729.2 377 100.0
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 3.5e-118 429.1 351 60.7
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 3.5e-118 429.1 351 61.3
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 1.7e-112 410.2 355 60.0
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 3.5e-110 402.5 357 58.0
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 4.6e-110 402.1 356 56.7
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 1.7e-109 400.2 354 57.6
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 3.0e-109 399.4 350 58.0
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 6.6e-109 398.3 354 55.6
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 6.6e-109 398.3 356 56.5
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 6.6e-109 398.3 381 54.6
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 8.7e-109 397.9 350 58.0
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 4.3e-108 395.6 354 55.1
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 4.3e-108 395.6 355 57.5
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 5.6e-108 395.2 354 57.3
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 2.8e-107 392.9 350 57.1
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 4.8e-107 392.1 356 56.2
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 6.2e-107 391.7 355 56.6
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.1e-106 391.0 350 56.6
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 1.1e-106 391.0 350 56.9
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 1.8e-106 390.2 357 57.4
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 2.4e-106 389.8 350 56.9
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 6.9e-106 388.3 352 57.1
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 9.0e-106 387.9 354 55.9
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 9.0e-106 387.9 358 55.0
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 1.5e-105 387.1 363 56.5
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.6e-105 386.3 352 56.8
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 4.5e-105 385.6 355 54.6
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 5.8e-105 385.2 354 54.8
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 7.6e-105 384.8 356 56.2
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 7.6e-105 384.8 354 57.3
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 7.6e-105 384.8 351 56.4
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.9e-105 384.4 352 56.5
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 9.9e-105 384.4 355 54.1
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 9.9e-105 384.4 362 54.1
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 6.4e-104 381.7 354 55.4
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.4e-103 380.6 355 55.5
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 2.4e-103 379.8 354 54.2
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 3.2e-103 379.4 356 55.1
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 1.2e-102 377.5 355 53.0
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 1.6e-102 377.1 351 55.0
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 4.6e-102 375.6 353 56.1
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 6.0e-102 375.2 355 54.1
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 1.3e-101 374.0 355 53.2
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 1.3e-101 374.0 353 53.3
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 5.1e-101 372.1 354 54.0
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 5.1e-101 372.1 355 54.6
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 8.7e-101 371.3 355 53.2
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 1.1e-100 370.9 353 54.7
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 5.6e-100 368.6 353 54.1
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 5.6e-100 368.6 357 52.9
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 7.4e-100 368.2 357 52.9
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 9.6e-100 367.9 352 53.7
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 4.8e-99 365.5 357 52.4
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 6.2e-99 365.2 356 56.7
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 1.4e-98 364.0 355 54.1
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 9.0e-98 361.3 353 52.7
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 4.5e-97 359.0 353 51.0
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.9e-96 356.3 370 51.9
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 8.4e-96 354.8 355 52.4
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 2.5e-95 353.2 357 51.5
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 2.5e-95 353.2 326 56.4
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 7.1e-95 351.7 354 52.0
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 4.6e-94 349.0 395 47.3
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 2.3e-93 346.7 350 51.4
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 3.0e-93 346.3 353 50.1
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 8.7e-93 344.7 354 48.6
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 8.7e-93 344.7 384 49.5
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 1.1e-92 344.4 354 49.2
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 1.5e-92 344.0 353 50.1
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 1.9e-92 343.6 354 48.9
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 3.3e-92 342.8 354 51.1
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 4.3e-92 342.4 354 48.3
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 4.3e-92 342.4 354 48.3
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 9.6e-92 341.3 354 48.3
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 1.3e-91 340.9 354 48.3
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 2.1e-91 340.1 355 48.5
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 2.1e-91 340.1 354 47.7
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 2.1e-91 340.1 354 48.3
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 1.1e-90 337.8 354 50.6
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 1.4e-90 337.4 356 50.0
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 1.4e-90 337.4 384 48.4
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 1.8e-90 337.0 396 48.2
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 2.4e-90 336.7 354 48.0
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 2.6e-89 333.2 354 51.7
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 1.3e-88 330.9 354 47.2
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 5.0e-88 328.9 349 50.4
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 6.5e-88 328.6 355 51.5
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 2.5e-87 326.6 272 57.0
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 4.2e-87 325.9 362 49.2
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 3.6e-86 322.8 317 52.7
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 2.3e-85 320.1 272 57.4
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 9.0e-82 308.1 330 51.2
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 1.1e-79 301.2 439 39.4
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 1.0e-77 294.7 373 45.6
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 2.0e-73 280.4 349 46.7
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 1.0e-72 278.1 356 46.6
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 3.8e-72 276.2 385 42.1
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 1.4e-66 257.7 378 40.7
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 5.2e-61 239.2 220 55.9
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 2.7e-57 226.9 278 50.0
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 1.2e-44 184.9 162 55.6
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 5.2e-37 159.5 352 29.0
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 2.9e-35 153.7 163 51.5
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.9e-35 153.7 154 54.5
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 2.9e-35 153.7 146 51.4
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 2.8e-30 137.1 131 52.7
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 9.2e-26 122.1 156 45.5
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 6.2e-22 109.4 69 68.1
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 8.1e-22 109.0 68 70.6
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 5.2e-13 79.7 66 54.5
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 2.2e-11 74.3 114 36.0
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 2.1e-09 67.8 49 57.1
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 4.6e-09 66.6 40 75.0
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 3.9e-08 63.5 95 34.7
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 8.6e-08 62.4 68 48.5


User provided reference genes

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