Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0602G148 Amborella trichopoda HOM05D003934 ORTHO05D005108 2.7e-101 372.1 196 100.0
ATR0602G008 Amborella trichopoda HOM05D003934 ORTHO05D005108 1.7e-92 342.8 182 99.5
TAR375G0202 Trochodendron aralioides HOM05D003934 ORTHO05D005108 2.6e-88 328.9 182 92.9
MBI07_g07099_MAGBIO Magnolia biondii HOM05D003934 ORTHO05D005108 3.7e-87 325.1 182 84.1
Nn3g19008 Nelumbo nucifera HOM05D003934 ORTHO05D005108 1.4e-86 323.2 182 90.1
GSVIVG01038711001 Vitis vinifera HOM05D003934 ORTHO05D005108 1.8e-86 322.8 182 82.4
CSS0014973 Camellia sinensis var. sinensis HOM05D003934 ORTHO05D005108 4.1e-86 321.6 197 84.8
CDE10G0188 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 4.1e-86 321.6 182 92.3
Solyc03g083430.3 Solanum lycopersicum HOM05D003934 ORTHO05D005108 4.1e-86 321.6 182 88.5
Sopen03g023200 Solanum pennellii HOM05D003934 ORTHO05D005108 4.1e-86 321.6 182 88.5
PGSC0003DMG400009079 Solanum tuberosum HOM05D003934 ORTHO05D005108 4.1e-86 321.6 182 88.5
Peaxi162Scf00550g00530 Petunia axillaris HOM05D003934 ORTHO05D005108 9.2e-86 320.5 182 91.2
vmacro06541 Vaccinium macrocarpon HOM05D003934 ORTHO05D005108 1.2e-85 320.1 182 82.4
Cpa.g.sc3.69 Carica papaya HOM05D003934 ORTHO05D005108 2.0e-85 319.3 182 90.1
THA.LOC104816810 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 2.0e-85 319.3 182 91.2
Nitab4.5_0000714g0110 Nicotiana tabacum HOM05D003934 ORTHO05D005108 4.5e-85 318.2 182 83.5
Nitab4.5_0007081g0020 Nicotiana tabacum HOM05D003934 ORTHO05D005108 4.5e-85 318.2 182 83.5
PGR042G0302 Punica granatum HOM05D003934 ORTHO05D005108 7.8e-85 317.4 182 89.0
CAN.G108.66 Capsicum annuum HOM05D003934 ORTHO05D005108 1.0e-84 317.0 182 80.8
Actinidia08639 Actinidia chinensis HOM05D003934 ORTHO05D005108 1.3e-84 316.6 182 82.4
Lj1C1015T5 Lonicera japonica HOM05D003934 ORTHO05D005108 1.7e-84 316.2 181 88.4
Psat5g078160 Pisum sativum HOM05D003934 ORTHO05D005108 1.7e-84 316.2 182 88.5
Actinidia34211 Actinidia chinensis HOM05D003934 ORTHO05D005108 2.3e-84 315.8 182 81.3
Eucgr.A01467 Eucalyptus grandis HOM05D003934 ORTHO05D005108 2.3e-84 315.8 182 87.9
Hma1.2p1_1188F.1_g265250 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 2.9e-84 315.5 182 81.3
HPP92_021551 Vanilla planifolia HOM05D003934 ORTHO05D005108 5.0e-84 314.7 182 89.0
Oeu041045.2 Olea europaea HOM05D003934 ORTHO05D005108 6.6e-84 314.3 182 83.5
QL09p009520 Quercus lobata HOM05D003934 ORTHO05D005108 6.6e-84 314.3 181 86.2
THA.LOC104820263 Tarenaya hassleriana HOM05D003934 ORTHO05D005108 6.6e-84 314.3 182 89.6
Phvul.009G053700 Phaseolus vulgaris HOM05D003934 ORTHO05D005108 8.6e-84 313.9 182 86.8
Sed0008190 Sechium edule HOM05D003934 ORTHO05D005108 8.6e-84 313.9 182 88.5
Manes.06G159600 Manihot esculenta HOM05D003934 ORTHO05D005108 1.1e-83 313.5 182 85.7
Ca_16696_v3 Cicer arietinum L. HOM05D003934 ORTHO05D005108 1.5e-83 313.2 182 87.4
Medtr3g091250 Medicago truncatula HOM05D003934 ORTHO05D005108 1.5e-83 313.2 182 86.8
arahy.Tifrunner.gnm1.ann1.W6P66N Arachis hypogaea HOM05D003934 ORTHO05D005108 2.5e-83 312.4 182 86.8
Glyma.06G127500 Glycine max HOM05D003934 ORTHO05D005108 2.5e-83 312.4 182 89.0
Os03g0717600 Oryza sativa ssp. japonica HOM05D003934 ORTHO05D005108 2.5e-83 312.4 182 89.6
Potri.012G012800 Populus trichocarpa HOM05D003934 ORTHO05D005108 2.5e-83 312.4 182 87.4
Sabra15G0013200 Salix brachista HOM05D003934 ORTHO05D005108 2.5e-83 312.4 182 87.4
ClCG05G008860 Citrullus lanatus HOM05D003934 ORTHO05D005108 3.3e-83 312.0 182 87.4
CsaV3_3G027880 Cucumis sativus L. HOM05D003934 ORTHO05D005108 3.3e-83 312.0 182 87.4
Glyma.04G236800 Glycine max HOM05D003934 ORTHO05D005108 3.3e-83 312.0 182 87.9
Haze_00188 Corylus avellana HOM05D003934 ORTHO05D005108 4.3e-83 311.6 182 84.6
Cc02_g01680 Coffea canephora HOM05D003934 ORTHO05D005108 7.3e-83 310.8 182 87.4
Pp3c5_21100 Physcomitrium patens HOM05D003934 ORTHO05D005108 7.3e-83 310.8 182 87.9
Cfa016252 Carpinus fangiana HOM05D003934 ORTHO05D005108 9.5e-83 310.5 182 84.1
CiPaw.05G251900 Carya illinoinensis HOM05D003934 ORTHO05D005108 9.5e-83 310.5 182 86.3
Aa31LG11G7140 Aethionema arabicum HOM05D003934 ORTHO05D005108 1.2e-82 310.1 182 86.8
arahy.Tifrunner.gnm1.ann1.WX46MS Arachis hypogaea HOM05D003934 ORTHO05D005108 1.2e-82 310.1 182 86.3
Potri.015G017200 Populus trichocarpa HOM05D003934 ORTHO05D005108 1.2e-82 310.1 182 84.6
HPP92_021541 Vanilla planifolia HOM05D003934 ORTHO05D005108 1.2e-82 310.1 182 87.9
CANSAT11G0158 Cannabis sativa HOM05D003934 ORTHO05D005108 1.6e-82 309.7 182 82.4
Sp6g36730 Schrenkiella parvula HOM05D003934 ORTHO05D005108 2.1e-82 309.3 182 85.2
MSTRG.8665 Avicennia marina HOM05D003934 ORTHO05D005108 3.6e-82 308.5 182 78.6
Lj1g0022752 Lotus japonicus HOM05D003934 ORTHO05D005108 3.6e-82 308.5 180 87.2
Lalb_Chr08g0240341 Lupinus albus HOM05D003934 ORTHO05D005108 3.6e-82 308.5 182 84.6
Migut.F00226 Erythranthe guttata HOM05D003934 ORTHO05D005108 4.7e-82 308.1 182 78.0
Gohir.D09G179100 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.0e-81 307.0 191 84.3
Gorai.006G201100 Gossypium raimondii HOM05D003934 ORTHO05D005108 1.0e-81 307.0 191 84.3
Zm00001eb156600 Zea mays HOM05D003934 ORTHO05D005108 1.0e-81 307.0 182 88.5
TWI14G0523 Tripterygium wilfordii HOM05D003934 ORTHO05D005108 1.4e-81 306.6 182 84.6
PSO063G5737 Papaver somniferum HOM05D003934 ORTHO05D005108 1.8e-81 306.2 182 86.8
PSO170G4033 Papaver somniferum HOM05D003934 ORTHO05D005108 1.8e-81 306.2 182 86.8
Mapoly0116s0041 Marchantia polymorpha HOM05D003934 ORTHO05D005108 2.3e-81 305.8 182 87.9
Carub.0006s0504 Capsella rubella HOM05D003934 ORTHO05D005108 3.0e-81 305.4 182 77.5
AL6G16130 Arabidopsis lyrata HOM05D003934 ORTHO05D005108 4.0e-81 305.1 182 80.8
Duzib205G1942 Durio zibethinus HOM05D003934 ORTHO05D005108 4.0e-81 305.1 191 81.2
Thecc.03G196100 Theobroma cacao HOM05D003934 ORTHO05D005108 5.2e-81 304.7 191 82.7
COL.COLO4_11261 Corchorus olitorius HOM05D003934 ORTHO05D005108 6.8e-81 304.3 191 82.2
Thhalv10013305m.g Eutrema salsugineum HOM05D003934 ORTHO05D005108 8.9e-81 303.9 182 78.0
Gohir.A11G232300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.2e-80 303.5 191 83.2
AT5G06160 Arabidopsis thaliana HOM05D003934 ORTHO05D005108 1.5e-80 303.1 182 76.9
Gohir.D11G243500 Gossypium hirsutum HOM05D003934 ORTHO05D005108 1.5e-80 303.1 191 83.2
Duzib068G1159 Durio zibethinus HOM05D003934 ORTHO05D005108 2.0e-80 302.8 191 81.7
Gohir.A09G184300 Gossypium hirsutum HOM05D003934 ORTHO05D005108 2.0e-80 302.8 192 83.9
Prupe.2G311500 Prunus persica HOM05D003934 ORTHO05D005108 2.0e-80 302.8 182 83.5
Aqoxy1G00997 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 2.6e-80 302.4 170 88.2
Ciclev10004777m.g Citrus clementina HOM05D003934 ORTHO05D005108 2.6e-80 302.4 183 85.8
MD07G1290300 Malus domestica HOM05D003934 ORTHO05D005108 2.6e-80 302.4 182 84.1
AUR62019377 Chenopodium quinoa HOM05D003934 ORTHO05D005108 3.4e-80 302.0 182 76.9
DCAR_026768 Daucus carota HOM05D003934 ORTHO05D005108 4.4e-80 301.6 183 76.0
MD01G1219700 Malus domestica HOM05D003934 ORTHO05D005108 4.4e-80 301.6 182 83.5
Hund11672 Selenicereus undatus HOM05D003934 ORTHO05D005108 9.8e-80 300.4 180 76.7
EL10Ac3g05301 Beta vulgaris HOM05D003934 ORTHO05D005108 1.7e-79 299.7 182 80.2
AUR62006111 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.7e-79 299.7 182 76.4
SGA_v2.0_scaffold44G16789 Striga asiatica HOM05D003934 ORTHO05D005108 1.7e-79 299.7 182 75.3
CARHR206870 Cardamine hirsuta HOM05D003934 ORTHO05D005108 8.3e-79 297.4 182 84.6
Ah.07g205840 Amaranthus hybridus HOM05D003934 ORTHO05D005108 3.2e-78 295.4 182 74.2
RcHm_v2.0_Chr1g0331941 Rosa chinensis HOM05D003934 ORTHO05D005108 3.2e-78 295.4 182 75.3
FvH4_7g06390 Fragaria vesca HOM05D003934 ORTHO05D005108 5.4e-78 294.7 180 75.6
FAN01G0480 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.4e-78 294.7 180 75.6
FAN03G1965 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.4e-78 294.7 180 75.6
FAN06G1603 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.4e-78 294.7 180 75.6
FAN10G3094 Fragaria x ananassa HOM05D003934 ORTHO05D005108 5.4e-78 294.7 180 75.6
BcaB05g21680 Brassica carinata HOM05D003934 ORTHO05D005108 4.6e-77 291.6 182 83.5
C02p02610 Brassica napus HOM05D003934 ORTHO05D005108 4.6e-77 291.6 182 83.5
BraA02t04872Z Brassica rapa HOM05D003934 ORTHO05D005108 1.7e-76 289.7 182 83.5
BolC2t06227H Brassica oleracea HOM05D003934 ORTHO05D005108 2.3e-76 289.3 182 83.0
Lsat_1_v5_gn_9_58300 Lactuca sativa HOM05D003934 ORTHO05D005108 2.3e-76 289.3 176 76.7
DCAR_009017 Daucus carota HOM05D003934 ORTHO05D005108 3.0e-76 288.9 182 76.4
SMO119G0296 Selaginella moellendorffii HOM05D003934 ORTHO05D005108 5.6e-75 284.6 183 83.6
FAN24G3520 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.1e-73 280.4 180 72.8
CDE10G0405 Ceratophyllum demersum HOM05D003934 ORTHO05D005108 3.4e-72 275.4 128 95.3
Atru.chr1.153 Acer truncatum HOM05D003934 ORTHO05D005108 4.4e-72 275.0 166 86.7
ECA232G2652 Erigeron canadensis HOM05D003934 ORTHO05D005108 5.8e-72 274.6 182 72.0
Oeu041318.2 Olea europaea HOM05D003934 ORTHO05D005108 1.4e-70 270.0 182 81.3
Sabra12G0018300 Salix brachista HOM05D003934 ORTHO05D005108 3.2e-70 268.9 163 85.9
SEGI_10674 Sequoiadendron giganteum HOM05D003934 ORTHO05D005108 4.1e-70 268.5 128 91.4
FAN26G2519 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.0e-70 267.7 182 76.4
SalBow4G2054 Salvia bowleyana HOM05D003934 ORTHO05D005108 7.0e-70 267.7 182 69.2
SalBow4G2493 Salvia bowleyana HOM05D003934 ORTHO05D005108 7.0e-70 267.7 182 69.2
FvH4_1g22860 Fragaria vesca HOM05D003934 ORTHO05D005108 9.2e-70 267.3 182 76.4
FAN19G2010 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.2e-69 266.9 182 76.4
A03p02600 Brassica napus HOM05D003934 ORTHO05D005108 2.7e-69 265.8 184 70.1
FvH4_5g28470 Fragaria vesca HOM05D003934 ORTHO05D005108 1.0e-68 263.8 180 70.0
C03p02940 Brassica napus HOM05D003934 ORTHO05D005108 2.3e-68 262.7 183 69.4
BolC3t12849H Brassica oleracea HOM05D003934 ORTHO05D005108 2.3e-68 262.7 183 69.4
FAN23G2330 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.0e-68 262.3 182 74.2
BraA03t09621Z Brassica rapa HOM05D003934 ORTHO05D005108 3.9e-68 261.9 184 69.0
BcaB01g05979 Brassica carinata HOM05D003934 ORTHO05D005108 1.9e-67 259.6 183 68.9
PSO782G1765 Papaver somniferum HOM05D003934 ORTHO05D005108 2.6e-64 249.2 186 65.1
FAN28G1126 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.8e-61 237.7 156 78.2
Aqoxy1G00994 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 8.6e-60 234.2 137 79.6
CBR_g4095 Chara braunii HOM05D003934 ORTHO05D005108 1.1e-59 233.8 194 58.8
Cre06.g297750 Chlamydomonas reinhardtii HOM05D003934 ORTHO05D005108 6.4e-55 218.0 183 58.5
MCO08G102 Micromonas commoda HOM05D003934 ORTHO05D005108 8.4e-55 217.6 176 68.2
AUR62031013 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.1e-53 213.0 186 56.5
AUR62019431 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.7e-53 212.6 184 53.3
FAN18G2200 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.3e-51 204.5 132 71.2
HanXRQChr09g0252981 Helianthus annuus HOM05D003934 ORTHO05D005108 1.6e-50 203.4 133 72.9
AUR62034796 Chenopodium quinoa HOM05D003934 ORTHO05D005108 1.8e-49 199.9 187 52.9
Haze_26996 Corylus avellana HOM05D003934 ORTHO05D005108 2.9e-47 192.6 180 57.8
Aqoxy2G03740 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 3.3e-43 179.1 124 65.3
FvH4_2g12040 Fragaria vesca HOM05D003934 ORTHO05D005108 3.1e-41 172.6 117 69.2
PRCOL_00004948 Prasinoderma coloniale HOM05D003934 ORTHO05D005108 2.6e-40 169.5 189 45.5
HanXRQChr09g0252971 Helianthus annuus HOM05D003934 ORTHO05D005108 4.5e-40 168.7 182 47.3
AUR62007347 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.4e-38 162.9 167 49.7
Cfa023976 Carpinus fangiana HOM05D003934 ORTHO05D005108 2.1e-37 159.8 126 57.1
AUR62031016 Chenopodium quinoa HOM05D003934 ORTHO05D005108 2.8e-26 122.9 113 51.3
FAN10G1096 Fragaria x ananassa HOM05D003934 ORTHO05D005108 9.0e-25 117.9 178 43.8
FvH4_7g05370 Fragaria vesca HOM05D003934 ORTHO05D005108 1.2e-24 117.5 178 43.8
FAN01G0659 Fragaria x ananassa HOM05D003934 ORTHO05D005108 1.2e-24 117.5 178 43.8
FAN10G2167 Fragaria x ananassa HOM05D003934 ORTHO05D005108 3.4e-24 115.9 178 43.3
A07p21690 Brassica napus HOM05D003934 ORTHO05D019879 7.6e-24 114.8 137 46.7
BolC6t37330H Brassica oleracea HOM05D003934 ORTHO05D019879 1.4e-22 110.5 136 45.6
BcaC08g44628 Brassica carinata HOM05D003934 ORTHO05D019879 1.9e-22 110.2 137 45.3
C06p21480 Brassica napus HOM05D003934 ORTHO05D019879 1.9e-22 110.2 137 45.3
FAN27G0411 Fragaria x ananassa HOM05D003934 ORTHO05D005108 7.1e-22 108.2 81 65.4
BraA07t29851Z Brassica rapa HOM05D003934 ORTHO05D019879 1.6e-21 107.1 85 60.0
BcaB02g07780 Brassica carinata HOM05D003934 ORTHO05D019879 3.1e-17 92.8 137 43.1
Aqoxy1G01000 Aquilegia oxysepala HOM05D003934 ORTHO05D005108 1.2e-16 90.9 59 71.2
Prupe.2G260300 Prunus persica HOM05D003934 ORTHO05D005108 7.2e-14 81.6 132 40.9
FAN07G2332 Fragaria x ananassa HOM05D003934 ORTHO05D005108 2.3e-12 76.6 119 43.7
HanXRQChr09g0252591 Helianthus annuus HOM05D003934 ORTHO05D019879 8.8e-12 74.7 50 68.0
Hma1.2p1_1973F.1_g309600 Hydrangea macrophylla HOM05D003934 ORTHO05D005108 3.1e-09 66.2 30 90.0


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