Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0068G114 Amborella trichopoda HOM05D005149 ORTHO05D006251 2.6e-161 572.0 289 100.0
TAR633G2177 Trochodendron aralioides HOM05D005149 ORTHO05D006251 5.9e-89 331.6 278 66.2
SEGI_09620 Sequoiadendron giganteum HOM05D005149 ORTHO05D006251 8.2e-83 311.2 285 58.2
ECA246G4563 Erigeron canadensis HOM05D005149 ORTHO05D006251 1.5e-81 307.0 287 59.2
CSS0030945 Camellia sinensis var. sinensis HOM05D005149 ORTHO05D006251 2.0e-81 306.6 285 61.1
Dinv24594 Davidia involucrata HOM05D005149 ORTHO05D006251 4.5e-81 305.4 291 58.4
PSO339G6394 Papaver somniferum HOM05D005149 ORTHO05D006251 1.3e-80 303.9 292 59.6
MSTRG.5085 Avicennia marina HOM05D005149 ORTHO05D006251 5.0e-80 302.0 278 61.2
Actinidia17467 Actinidia chinensis HOM05D005149 ORTHO05D006251 6.5e-80 301.6 287 61.0
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 3.2e-79 299.3 278 60.1
Migut.N01878 Erythranthe guttata HOM05D005149 ORTHO05D006251 9.4e-79 297.7 278 60.4
Nn2g14694 Nelumbo nucifera HOM05D005149 ORTHO05D006251 1.2e-78 297.4 281 60.9
Oeu058668.1 Olea europaea HOM05D005149 ORTHO05D006251 4.7e-78 295.4 272 58.1
HanXRQChr06g0174201 Helianthus annuus HOM05D005149 ORTHO05D006251 1.0e-77 294.3 291 57.0
HPP92_019772 Vanilla planifolia HOM05D005149 ORTHO05D006251 1.4e-77 293.9 279 58.8
Phvul.011G187600 Phaseolus vulgaris HOM05D005149 ORTHO05D006251 2.6e-76 289.7 281 56.2
Aqoxy1G01331 Aquilegia oxysepala HOM05D005149 ORTHO05D006251 7.4e-76 288.1 285 60.0
vmacro20844 Vaccinium macrocarpon HOM05D005149 ORTHO05D006251 1.7e-75 287.0 291 59.8
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea HOM05D005149 ORTHO05D006251 3.7e-75 285.8 284 57.4
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea HOM05D005149 ORTHO05D006251 3.7e-75 285.8 284 57.4
Rhsim01G0121200 Rhododendron simsii HOM05D005149 ORTHO05D006251 3.7e-75 285.8 287 60.6
Ca_12171_v3 Cicer arietinum L. HOM05D005149 ORTHO05D006251 4.8e-75 285.4 276 57.6
Lalb_Chr19g0132531 Lupinus albus HOM05D005149 ORTHO05D006251 3.1e-74 282.7 270 58.5
CANSAT56G0938 Cannabis sativa HOM05D005149 ORTHO05D006251 2.6e-73 279.6 283 56.2
MBI19_g30303_MAGBIO Magnolia biondii HOM05D005149 ORTHO05D006251 3.5e-73 279.3 280 59.3
MD07G1054600 Malus domestica HOM05D005149 ORTHO05D006251 4.5e-73 278.9 274 57.7
Ciclev10015236m.g Citrus clementina HOM05D005149 ORTHO05D006251 5.9e-73 278.5 285 54.0
Psat0s3059g0040 Pisum sativum HOM05D005149 ORTHO05D006251 5.9e-73 278.5 277 57.0
Lj3g0016494 Lotus japonicus HOM05D005149 ORTHO05D006251 1.0e-72 277.7 273 56.8
RcHm_v2.0_Chr1g0331361 Rosa chinensis HOM05D005149 ORTHO05D006251 1.7e-72 276.9 287 56.8
Gohir.D13G181800 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.2e-72 276.6 296 53.0
Manes.07G084100 Manihot esculenta HOM05D005149 ORTHO05D006251 2.9e-72 276.2 288 55.6
SGA_v2.0_scaffold196G40993 Striga asiatica HOM05D005149 ORTHO05D006251 2.9e-72 276.2 305 53.1
MD02G1263600 Malus domestica HOM05D005149 ORTHO05D006251 5.0e-72 275.4 280 57.9
CsaV3_6G035780 Cucumis sativus L. HOM05D005149 ORTHO05D006251 8.5e-72 274.6 272 55.9
Gorai.013G207400 Gossypium raimondii HOM05D005149 ORTHO05D006251 8.5e-72 274.6 296 52.7
Thecc.10G129400 Theobroma cacao HOM05D005149 ORTHO05D006251 8.5e-72 274.6 300 53.7
Haze_03404 Corylus avellana HOM05D005149 ORTHO05D006251 1.4e-71 273.9 293 54.3
Gohir.A09G246100 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.4e-71 273.9 296 53.4
Lalb_Chr03g0032361 Lupinus albus HOM05D005149 ORTHO05D006251 1.4e-71 273.9 273 56.8
DCAR_023093 Daucus carota HOM05D005149 ORTHO05D006251 2.5e-71 273.1 270 55.9
Gohir.A11G310500 Gossypium hirsutum HOM05D005149 ORTHO05D006251 2.5e-71 273.1 293 52.9
Gorai.006G271200 Gossypium raimondii HOM05D005149 ORTHO05D006251 5.5e-71 271.9 296 52.7
FvH4_4g11870 Fragaria vesca HOM05D005149 ORTHO05D006251 7.2e-71 271.6 274 57.3
CiPaw.13G047200 Carya illinoinensis HOM05D005149 ORTHO05D006251 9.4e-71 271.2 296 54.1
FvH4_7g05040 Fragaria vesca HOM05D005149 ORTHO05D006251 9.4e-71 271.2 274 56.9
FAN12G0991 Fragaria x ananassa HOM05D005149 ORTHO05D006251 9.4e-71 271.2 274 56.9
Duzib106G0431 Durio zibethinus HOM05D005149 ORTHO05D006251 1.2e-70 270.8 293 53.9
Glyma.08G228000 Glycine max HOM05D005149 ORTHO05D006251 1.2e-70 270.8 282 55.0
Gohir.D09G246700 Gossypium hirsutum HOM05D005149 ORTHO05D006251 1.2e-70 270.8 296 52.4
Sc09g0004900 Simmondsia chinensis HOM05D005149 ORTHO05D006251 1.2e-70 270.8 290 56.2
MELO3C011385.2 Cucumis melo HOM05D005149 ORTHO05D006251 1.6e-70 270.4 272 55.1
FAN17G1198 Fragaria x ananassa HOM05D005149 ORTHO05D006251 2.7e-70 269.6 274 56.9
PGR142G4466 Punica granatum HOM05D005149 ORTHO05D006251 2.7e-70 269.6 280 56.1
Sed0022214 Sechium edule HOM05D005149 ORTHO05D006251 2.7e-70 269.6 273 54.6
Hund06827 Selenicereus undatus HOM05D005149 ORTHO05D006251 2.7e-70 269.6 285 55.1
Nitab4.5_0005056g0010 Nicotiana tabacum HOM05D005149 ORTHO05D006251 4.7e-70 268.9 283 56.2
SalBow4G1949 Salvia bowleyana HOM05D005149 ORTHO05D006251 6.1e-70 268.5 295 54.6
AL6G14620 Arabidopsis lyrata HOM05D005149 ORTHO05D006251 8.0e-70 268.1 279 56.3
AT5G04920 Arabidopsis thaliana HOM05D005149 ORTHO05D006251 1.0e-69 267.7 275 56.7
Thhalv10013568m.g Eutrema salsugineum HOM05D005149 ORTHO05D006251 1.0e-69 267.7 275 57.5
Potri.010G246400 Populus trichocarpa HOM05D005149 ORTHO05D006251 2.3e-69 266.5 290 54.1
FAN07G2641 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.0e-69 266.2 274 56.6
PGSC0003DMG400027500 Solanum tuberosum HOM05D005149 ORTHO05D006251 3.9e-69 265.8 287 53.7
VMungo1127G0494 Vigna mungo HOM05D005149 ORTHO05D006251 3.9e-69 265.8 316 48.7
Cfa010450 Carpinus fangiana HOM05D005149 ORTHO05D006251 8.8e-69 264.6 307 50.5
FAN03G2277 Fragaria x ananassa HOM05D005149 ORTHO05D006251 8.8e-69 264.6 269 55.8
Lj7C543G12 Lonicera japonica HOM05D005149 ORTHO05D006251 1.1e-68 264.2 309 51.8
Sopen01g040620 Solanum pennellii HOM05D005149 ORTHO05D006251 1.5e-68 263.8 287 54.0
Lsat_1_v5_gn_3_25820 Lactuca sativa HOM05D005149 ORTHO05D006251 2.0e-68 263.5 297 52.5
Peaxi162Scf00647g00319 Petunia axillaris HOM05D005149 ORTHO05D006251 2.0e-68 263.5 291 53.3
Solyc01g096910.3 Solanum lycopersicum HOM05D005149 ORTHO05D006251 4.4e-68 262.3 287 53.7
EL10Ac4g08774 Beta vulgaris HOM05D005149 ORTHO05D006251 1.3e-67 260.8 280 53.9
Carub.0010s0002 Capsella rubella HOM05D005149 ORTHO05D006251 1.7e-67 260.4 275 55.6
Medtr8g044150 Medicago truncatula HOM05D005149 ORTHO05D006251 3.7e-67 259.2 281 55.9
Sp6g37880 Schrenkiella parvula HOM05D005149 ORTHO05D006251 3.7e-67 259.2 275 54.5
Carub.0006s0386 Capsella rubella HOM05D005149 ORTHO05D006251 4.8e-67 258.8 275 55.6
QL04p050393 Quercus lobata HOM05D005149 ORTHO05D006251 2.4e-66 256.5 315 49.5
ClCG08G010780 Citrullus lanatus HOM05D005149 ORTHO05D006251 3.1e-66 256.1 275 53.5
C09p71830 Brassica napus HOM05D005149 ORTHO05D006251 9.1e-66 254.6 273 54.9
BolC9t59932H Brassica oleracea HOM05D005149 ORTHO05D006251 9.1e-66 254.6 273 54.9
A10p31210 Brassica napus HOM05D005149 ORTHO05D006251 1.6e-65 253.8 279 53.4
Ah.04g162660 Amaranthus hybridus HOM05D005149 ORTHO05D006251 3.5e-65 252.7 280 54.3
CARHR208340 Cardamine hirsuta HOM05D005149 ORTHO05D006251 3.5e-65 252.7 275 54.9
BraA10t45165Z Brassica rapa HOM05D005149 ORTHO05D006251 5.9e-65 251.9 274 54.4
Aa31LG11G5780 Aethionema arabicum HOM05D005149 ORTHO05D006251 1.3e-64 250.8 275 53.5
Mapoly0072s0023 Marchantia polymorpha HOM05D005149 ORTHO05D006251 1.7e-64 250.4 299 48.2
THA.LOC104816483 Tarenaya hassleriana HOM05D005149 ORTHO05D006251 2.9e-64 249.6 270 55.2
FAN12G2325 Fragaria x ananassa HOM05D005149 ORTHO05D006251 6.5e-64 248.4 272 54.0
TWI38G0882 Tripterygium wilfordii HOM05D005149 ORTHO05D006251 9.4e-63 244.6 282 52.1
CDE04G0393 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 8.0e-62 241.5 276 50.7
Atru.chr12.1229 Acer truncatum HOM05D005149 ORTHO05D006251 1.4e-61 240.7 275 53.8
unitig_749.g13551 Utricularia gibba HOM05D005149 ORTHO05D006251 4.0e-61 239.2 276 50.4
Pp3c23_21630 Physcomitrium patens HOM05D005149 ORTHO05D006251 6.8e-61 238.4 283 49.5
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis HOM05D005149 ORTHO05D006251 1.2e-60 237.7 296 47.3
FAN01G0635 Fragaria x ananassa HOM05D005149 ORTHO05D006251 3.4e-60 236.1 262 52.3
Gohir.D13G182000 Gossypium hirsutum HOM05D005149 ORTHO05D006251 3.4e-60 236.1 296 48.6
BcaC06g32201 Brassica carinata HOM05D005149 ORTHO05D006251 2.4e-58 229.9 277 52.0
AUR62014307 Chenopodium quinoa HOM05D005149 ORTHO05D006251 6.5e-56 221.9 296 48.6
SMO011G0007 Selaginella moellendorffii HOM05D005149 ORTHO05D006251 6.5e-56 221.9 276 49.3
Os01g0813500 Oryza sativa ssp. japonica HOM05D005149 ORTHO05D006251 4.7e-54 215.7 295 45.1
Zm00001eb149970 Zea mays HOM05D005149 ORTHO05D006251 8.0e-54 214.9 290 46.9
Eucgr.G02641 Eucalyptus grandis HOM05D005149 ORTHO05D006251 1.0e-53 214.5 237 52.7
SHI21243 Sapria himalayana HOM05D005149 ORTHO05D006251 8.8e-53 211.5 282 47.2
AUR62034100 Chenopodium quinoa HOM05D005149 ORTHO05D006251 6.3e-51 205.3 286 47.9
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 2.4e-50 203.4 283 45.6
Sed0016259 Sechium edule HOM05D005149 ORTHO05D006251 4.1e-50 202.6 279 48.4
CAN.G134.53 Capsicum annuum HOM05D005149 ORTHO05D006251 1.1e-47 194.5 184 58.7
Prupe.2G061300 Prunus persica HOM05D005149 ORTHO05D006251 8.0e-46 188.3 222 51.4
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 5.7e-44 182.2 214 51.4
CBR_g40666 Chara braunii HOM05D005149 ORTHO05D006251 5.9e-41 172.2 339 36.3
TPR.G35740 Trifolium pratense HOM05D005149 ORTHO05D006251 1.8e-37 160.6 101 82.2
Zm00001eb369140 Zea mays HOM05D005149 ORTHO05D006251 1.8e-37 160.6 157 58.6
GSVIVG01010707001 Vitis vinifera HOM05D005149 ORTHO05D006251 2.3e-37 160.2 100 83.0
CAN.G134.55 Capsicum annuum HOM05D005149 ORTHO05D006251 2.0e-36 157.1 101 80.2
Migut.O00436 Erythranthe guttata HOM05D005149 ORTHO05D006251 2.7e-33 146.7 169 51.5
Cpa.g.sc54.66 Carica papaya HOM05D005149 ORTHO05D006251 3.5e-33 146.4 199 46.7
Cc02_g32050 Coffea canephora HOM05D005149 ORTHO05D006251 7.8e-33 145.2 87 83.9
GSVIVG01027217001 Vitis vinifera HOM05D005149 ORTHO05D006251 6.6e-32 142.1 87 83.9
Sabra08G0007600 Salix brachista HOM05D005149 ORTHO05D006251 3.4e-28 129.8 185 42.7
CDE02G4629 Ceratophyllum demersum HOM05D005149 ORTHO05D006251 7.3e-23 112.1 208 37.5
Glyma.15G221000 Glycine max HOM05D005149 ORTHO05D006251 3.6e-22 109.8 68 79.4
Gorai.013G207600 Gossypium raimondii HOM05D005149 ORTHO05D006251 6.8e-21 105.5 73 71.2
Cpa.g.sc54.64 Carica papaya HOM05D005149 ORTHO05D006251 5.8e-20 102.4 63 81.0
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla HOM05D005149 ORTHO05D006251 1.4e-18 97.8 63 77.8
MCO16G624 Micromonas commoda HOM05D005149 ORTHO05D006251 5.6e-15 85.9 104 46.2
Cre03.g159750 Chlamydomonas reinhardtii HOM05D005149 ORTHO05D006251 1.1e-13 81.6 114 42.1
PRCOL_00005700 Prasinoderma coloniale HOM05D005149 ORTHO05D006251 3.1e-13 80.1 101 43.6
BcaB04g17834 Brassica carinata HOM05D005149 ORTHO05D017514 5.2e-13 79.3 95 50.5
MD12G1098600 Malus domestica HOM05D005149 ORTHO05D006251 9.9e-12 75.1 56 64.3
Cpa.g.c41130 Carica papaya HOM05D005149 ORTHO05D006251 7.1e-10 68.9 36 88.9


User provided reference genes

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