Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 5.3e-229 797.3 408 100.0
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 1.5e-93 347.4 351 53.0
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 5.4e-88 328.9 411 46.7
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 2.0e-87 327.0 405 47.4
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 7.7e-87 325.1 414 47.8
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 1.1e-85 321.2 411 47.9
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 3.0e-83 313.2 405 46.2
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 6.8e-83 312.0 410 48.0
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 6.8e-83 312.0 417 45.8
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 8.9e-83 311.6 319 54.2
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 2.0e-82 310.5 396 45.5
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 3.4e-82 309.7 414 45.2
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 1.3e-81 307.8 311 53.1
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.2e-81 307.0 319 53.0
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 4.9e-81 305.8 321 53.6
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 1.1e-80 304.7 397 46.1
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.1e-80 304.7 331 52.6
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 1.4e-80 304.3 413 45.0
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 1.8e-80 303.9 367 48.5
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 5.4e-80 302.4 312 54.8
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 1.2e-79 301.2 309 53.1
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.7e-79 300.1 380 48.9
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 3.5e-79 299.7 324 50.3
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 5.9e-79 298.9 378 47.4
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 7.8e-79 298.5 378 45.8
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 1.3e-78 297.7 414 44.9
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 1.3e-78 297.7 348 50.3
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 1.1e-77 294.7 413 42.4
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 2.5e-77 293.5 400 43.5
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 9.5e-77 291.6 306 50.0
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 9.5e-77 291.6 414 44.2
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 2.1e-76 290.4 320 51.6
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.1e-76 290.4 396 44.7
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 2.8e-76 290.0 430 43.3
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 3.6e-76 289.7 402 44.8
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 4.7e-76 289.3 333 49.5
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 4.7e-76 289.3 396 45.2
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 4.7e-76 289.3 367 48.2
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.1e-76 288.9 400 44.5
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 6.1e-76 288.9 394 44.7
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 8.0e-76 288.5 308 51.3
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 8.0e-76 288.5 348 48.6
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 1.0e-75 288.1 407 43.5
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.4e-75 287.7 402 43.8
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 2.3e-75 287.0 353 47.0
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 1.2e-74 284.6 399 43.6
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 1.2e-74 284.6 416 44.0
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 3.4e-74 283.1 401 42.9
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.4e-74 282.7 306 51.6
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 5.8e-74 282.3 401 43.1
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 7.5e-74 282.0 320 49.7
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 9.8e-74 281.6 314 50.0
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 1.7e-73 280.8 407 43.0
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.9e-73 280.0 389 44.7
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 2.9e-73 280.0 404 42.3
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 3.7e-73 279.6 426 42.0
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 3.7e-73 279.6 368 45.1
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 8.3e-73 278.5 404 42.1
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.1e-72 278.1 396 44.7
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 1.9e-72 277.3 412 41.3
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 1.9e-72 277.3 397 44.6
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 2.4e-72 276.9 315 49.5
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 3.2e-72 276.6 407 42.5
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 4.1e-72 276.2 428 42.1
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 4.1e-72 276.2 398 44.0
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 5.4e-72 275.8 315 49.2
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 5.4e-72 275.8 315 49.2
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 5.4e-72 275.8 410 43.4
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 5.4e-72 275.8 415 41.4
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 5.4e-72 275.8 408 41.9
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 9.2e-72 275.0 361 42.7
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 2.0e-71 273.9 409 42.5
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 3.5e-71 273.1 362 45.9
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.0e-70 271.6 395 43.8
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 2.3e-70 270.4 403 43.4
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 2.3e-70 270.4 391 43.7
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.9e-70 269.6 382 41.9
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 8.6e-70 268.5 411 42.6
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 2.5e-69 266.9 312 49.0
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 7.3e-69 265.4 341 47.2
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.8e-68 263.5 368 42.4
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.8e-67 260.8 341 46.0
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 4.0e-67 259.6 484 38.4
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 8.3e-65 251.9 367 42.0
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 1.4e-64 251.1 400 39.8
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 1.2e-63 248.1 311 48.9
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 7.6e-58 228.8 273 48.4
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 4.6e-55 219.5 404 37.6
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 1.3e-54 218.0 274 43.4
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 6.6e-54 215.7 320 39.4
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 3.3e-53 213.4 291 45.0
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 8.9e-51 205.3 494 32.2
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 1.1e-48 198.4 250 45.6
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 9.3e-48 195.3 383 34.2
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 9.9e-42 175.3 104 76.0
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 5.4e-40 169.5 213 45.1
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 3.9e-38 163.3 238 42.4
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 3.1e-35 153.7 200 45.5
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 2.7e-31 140.6 150 46.7
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.7e-31 140.6 195 44.6
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 2.5e-29 134.0 225 40.0
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.1e-28 131.0 198 40.9
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 4.8e-28 129.8 338 34.0
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 9.0e-27 125.6 167 44.9
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 6.5e-25 119.4 205 37.6
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.4e-19 101.7 138 41.3
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.0e-18 97.8 112 50.0
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 7.1e-16 89.4 214 34.1
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 2.1e-15 87.8 143 37.8
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 5.3e-11 73.2 103 38.8
Aqoxy6G00310 Aquilegia oxysepala HOM05D001245 ORTHO05D004475 3.0e-06 57.4 81 35.8
Glyma.16G005600 Glycine max HOM05D001245 ORTHO05D004475 5.1e-06 56.6 82 36.6
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 8.8e-06 55.8 209 26.8


User provided reference genes

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